NFKB1 (Sus scrofa)
Rel

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00554 (RHD_DNA_bind) IPR011539 ENSSSCG00000030957 T317511_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NFKB1
M03448_2.00 		Homo sapiens
MGGGGAWTCCCCT
AGGGGAWTCCCCK		 SELEX
Jolma et al.(2013)
NFKB1_1 		1.000 1.000
NFKB1
M05887_2.00 		Homo sapiens
NGGKRNTYYCCCN
NGGGRRANYMCCN		 SMiLE-seq
Isakova et al.(2017)
NFKB1 		1.000 1.000
NFKB1
M09348_2.00 		Homo sapiens
HYTTCCCY
RGGGAARD		 Misc
Kulakovskiy et al.(2013)
NFKB1_HUMAN.H11MO.0.A 		1.000 1.000
Nfkb1
M09358_2.00 		Mus musculus
GGGRNTTYCCC
GGGRAANYCCC		 Misc
Kulakovskiy et al.(2013)
NFKB1_MOUSE.H11MO.0.A 		1.000 1.000
NFKB1
M11228_2.00 		Homo sapiens
GGGGATYCCC
GGGRATCCCC		 Transfac
Matys et al.(2006)
V$NFKAPPAB50_01 		1.000 1.000
NFKB1
M11229_2.00 		Homo sapiens
NGGGAHTYYCCM
KGGRRADTCCCN		 Transfac
Matys et al.(2006)
V$NFKB_C 		1.000 1.000
NFKB1
M11230_2.00 		Homo sapiens
DKGGGAMTTYCCNN
NNGGRAAKTCCCMH		 Transfac
Matys et al.(2006)
V$NFKB_Q6 		1.000 1.000
NFKB1
M11231_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$P50_Q6 		1.000 1.000
NFKB2
M03446_2.00 		Homo sapiens
NGGGGAWTCCCCB
VGGGGAWTCCCCN		 SELEX
Jolma et al.(2013)
NFKB2_1 		0.833 0.833
NFKB2
M05699_2.00 		Homo sapiens
HGGKRNWTCCCCN
NGGGGAWNYMCCD		 SELEX
Yin et al.(2017)
NFKB2_eDBD_HT-SELEX 		0.833 0.833
NFKB2
M09344_2.00 		Homo sapiens
GGGRHTTYCCC
GGGRAADYCCC		 Misc
Kulakovskiy et al.(2013)
NFKB2_HUMAN.H11MO.0.B 		0.833 0.833
Nfkb2
M09356_2.00 		Mus musculus
GGGRHTTYCCC
GGGRAADYCCC		 Misc
Kulakovskiy et al.(2013)
NFKB2_MOUSE.H11MO.0.C 		0.833 0.833
NFKB2
M05700_2.00 		Homo sapiens
HGGKRNWTYCCCN
NGGGRAWNYMCCD		 SELEX
Yin et al.(2017)
NFKB2_eDBD_Methyl-HT-SELEX 		0.833 0.833
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSSCP00000030177 Rel 31 72

Links

Other Rel family TFs
Other Sus scrofa TFs

122 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
NFKB1 Ochotona princeps ENSOPRG00000005212 I 1.000
Nfkb1 Rattus norvegicus ENSRNOG00000023258 I 1.000
NFKB1 Vicugna pacos ENSVPAG00000000280 I 1.000
NFKB1 Equus caballus ENSECAG00000015042 I 1.000
ENSBTAP00000027016-D1 Bos grunniens ENSBTAP00000027016-D1 I 1.000
NFKB1 Tursiops truncatus ENSTTRG00000010852 I 1.000
NFKB1 Loxodonta africana ENSLAFG00000009344 I 1.000
ENSP00000226574 Macaca fascicularis ENSP00000226574 I 1.000
Nfkb1 Mus musculus ENSMUSG00000028163 D 1.000
NFKB1 Otolemur garnettii ENSOGAG00000012840 I 1.000
ENSSHAG00000007374 Sarcophilus harrisii ENSSHAG00000007374 I 1.000
ENSPPYG00000014965 Pongo abelii ENSPPYG00000014965 I 1.000
NFKB1 Gorilla gorilla ENSGGOG00000009071 I 1.000
NFKB1 Oryctolagus cuniculus ENSOCUG00000021712 I 1.000
ENSOARG00000012718 Ovis aries ENSOARG00000012718 I 1.000
NFKB1 Felis catus ENSFCAG00000007557 I 1.000
NFKB1 Homo sapiens ENSG00000109320 D 1.000
NFKB1 Pteropus vampyrus ENSPVAG00000002722 I 1.000
ENSCSAG00000004049 Chlorocebus sabaeus ENSCSAG00000004049 I 1.000
NFKB1 Bos taurus ENSBTAG00000020270 I 1.000
ENSAMEG00000008882 Ailuropoda melanoleuca ENSAMEG00000008882 I 1.000
NFKB1 Tupaia belangeri ENSTBEG00000003520 I 1.000
ENSSTOG00000011445 Ictidomys tridecemlineatus ENSSTOG00000011445 I 1.000
NFKB1 Monodelphis domestica ENSMODG00000020672 I 1.000
NFKB1 Macaca mulatta ENSMMUG00000003736 I 1.000
NFKB1 Canis familiaris ENSCAFG00000010730 I 1.000
ENSNLEG00000013325 Nomascus leucogenys ENSNLEG00000013325 I 1.000
NFKB1 Procavia capensis ENSPCAG00000008172 I 1.000
NFKB1 Cavia porcellus ENSCPOG00000007789 I 1.000
NFKB1 Pan troglodytes ENSPTRG00000016320 I 1.000
NFKB1 Callithrix jacchus ENSCJAG00000015382 I 1.000
ENSMEUG00000001334 Macropus eugenii ENSMEUG00000001334 I 1.000
ENSMPUG00000009413 Mustela putorius furo ENSMPUG00000009413 I 1.000
NFKB1 Meleagris gallopavo ENSMGAG00000011299 I 0.976
NFKB1 Taeniopygia guttata ENSTGUG00000003595 I 0.976
Aan_R012729 Calypte anna Aan_R012729 I 0.976
ENSFALG00000008136 Ficedula albicollis ENSFALG00000008136 I 0.976
NFKB1 Gallus gallus ENSGALG00000012304 I 0.976
NFKB1 Choloepus hoffmanni ENSCHOG00000010814 N 0.976
ENSPSIG00000008515 Pelodiscus sinensis ENSPSIG00000008515 I 0.976
Tal_R004861 Tyto alba Tal_R004861 I 0.976
Gfo_R000994 Geospiza fortis Gfo_R000994 I 0.976
Pvit_05196 Pogona vitticeps Pvit_05196 I 0.976
Afo_R015662 Aptenodytes forsteri Afo_R015662 I 0.976
ENSAPLG00000013878 Anas platyrhynchos ENSAPLG00000013878 I 0.952
ENSLOCG00000012080 Lepisosteus oculatus ENSLOCG00000012080 I 0.929
ENSLACG00000002751 Latimeria chalumnae ENSLACG00000002751 I 0.929
nfkb1 Xenopus tropicalis XB-GENE-985746 I 0.905
nfkb1 Danio rerio ENSDARG00000105261 I 0.905
ENSAMXG00000003341 Astyanax mexicanus ENSAMXG00000003341 I 0.905
ENSXMAG00000015369 Xiphophorus maculatus ENSXMAG00000015369 I 0.905
ENSPFOG00000016918 Poecilia formosa ENSPFOG00000016918 I 0.905
nfkb1.L Xenopus laevis XB-GENE-985749 I 0.881
ENSLOCG00000012413 Lepisosteus oculatus ENSLOCG00000012413 N 0.881
ENSOANG00000028755 Ornithorhynchus anatinus ENSOANG00000028755 I 0.872
ENSONIG00000004349 Oreochromis niloticus ENSONIG00000004349 I 0.857
ENSGMOG00000007506 Gadus morhua ENSGMOG00000007506 N 0.857
NFKB1 Gasterosteus aculeatus ENSGACG00000016876 I 0.857
nfkb2.S Xenopus laevis XB-GENE-970090 N 0.857
Nfkb2 Rattus norvegicus ENSRNOG00000019311 I 0.833
ENSBTAP00000007904-D1 Bos grunniens ENSBTAP00000007904-D1 I 0.833
Gfo_R002459 Geospiza fortis Gfo_R002459 I 0.833
Myotis_brandtii_NFKB2_10025917 Myotis brandtii Myotis_brandtii_NFKB2_10025917 I 0.833
Pvit_13855 Pogona vitticeps Pvit_13855 I 0.833
Ogr18048 Ophisaurus gracilis Ogr18048 I 0.833
Cmyd_10006544 Chelonia mydas Cmyd_10006544 I 0.833
NFKB2 Sorex araneus ENSSARG00000006180 I 0.833
ENSSHAG00000018852 Sarcophilus harrisii ENSSHAG00000018852 I 0.833
NFKB2 Taeniopygia guttata ENSTGUG00000007491 I 0.833
ENSSTOG00000002191 Ictidomys tridecemlineatus ENSSTOG00000002191 I 0.833
Aan_R011824 Calypte anna Aan_R011824 I 0.833
Afo_R002575 Aptenodytes forsteri Afo_R002575 I 0.833
NFKB2 Sus scrofa ENSSSCG00000010580 I 0.833
Alligator_sinensis_CCG009270.1 Alligator sinensis Alligator_sinensis_CCG009270.1 I 0.833
Brh_R009664 Buceros rhinoceros Brh_R009664 I 0.833
ENSOARG00000000483 Ovis aries ENSOARG00000000483 I 0.833
NFKB2 Equus caballus ENSECAG00000019593 I 0.833
NFKB2 Anolis carolinensis ENSACAG00000014215 I 0.833
Nfkb2 Dipodomys ordii ENSDORG00000013409 I 0.833
NFKB2 Dasypus novemcinctus ENSDNOG00000032784 I 0.833
ENSMEUG00000011176 Macropus eugenii ENSMEUG00000011176 I 0.833
NFKB2 Loxodonta africana ENSLAFG00000006805 I 0.833
ENSAPLG00000013409 Anas platyrhynchos ENSAPLG00000013409 I 0.833
NFKB2 Felis catus ENSFCAG00000001242 I 0.833
ENSAMEG00000017735 Ailuropoda melanoleuca ENSAMEG00000017735 I 0.833
ENSFALG00000007271 Ficedula albicollis ENSFALG00000007271 I 0.833
ENSLACG00000016308 Latimeria chalumnae ENSLACG00000016308 N 0.833
ENSMGAG00000007084 Meleagris gallopavo ENSMGAG00000007084 I 0.833
NFKB2 Microcebus murinus ENSMICG00000011856 I 0.833
NFKB2 Ochotona princeps ENSOPRG00000006569 I 0.833
NFKB2 Callithrix jacchus ENSCJAG00000017928 I 0.833
NFKB2 Canis familiaris ENSCAFG00000010155 I 0.833
NFKB2 Procavia capensis ENSPCAG00000011503 I 0.833
NFKB2 Bos taurus ENSBTAG00000006017 I 0.833
NFKB2 Gallus gallus ENSGALG00000005653 I 0.833
NFKB2 Otolemur garnettii ENSOGAG00000016379 I 0.833
NFKB2 Myotis lucifugus ENSMLUG00000006287 I 0.833
ENSMPUG00000016882 Mustela putorius furo ENSMPUG00000016882 I 0.833
Nfkb2 Mus musculus ENSMUSG00000025225 D 0.833
NFKB2 Oryctolagus cuniculus ENSOCUG00000005735 I 0.833
NFKB2 Cavia porcellus ENSCPOG00000004847 I 0.833
nfkb2 Gasterosteus aculeatus ENSGACG00000001323 N 0.810
ENSXMAG00000000193 Xiphophorus maculatus ENSXMAG00000000193 N 0.810
nfkb2 Tetraodon nigroviridis ENSTNIG00000013359 N 0.810
NFKB1 Tetraodon nigroviridis ENSTNIG00000002693 N 0.810
nfkb2 Takifugu rubripes ENSTRUG00000004360 N 0.810
ENSONIG00000007023 Oreochromis niloticus ENSONIG00000007023 N 0.810
ENSPFOG00000012589 Poecilia formosa ENSPFOG00000012589 N 0.810
nfkb2 Oryzias latipes ENSORLG00000002942 N 0.810
Ogr10707 Ophisaurus gracilis Ogr10707 I 0.786
nfkb2 Danio rerio ENSDARG00000038687 N 0.786
ENSPMAG00000006461 Petromyzon marinus ENSPMAG00000006461 N 0.786
ENSLACG00000002526 Latimeria chalumnae ENSLACG00000002526 N 0.786
ENSGMOG00000002675 Gadus morhua ENSGMOG00000002675 N 0.786
Aqu1.229645 Amphimedon queenslandica Aqu1.229645 N 0.738
nfkbp105 Ciona intestinalis ENSCING00000006933 N 0.738
ENSCSAVG00000003063 Ciona savignyi ENSCSAVG00000003063 N 0.738
Sakowv30003175m.g Saccoglossus kowalevskii Sakowv30003175m.g N 0.714
NEMVEDRAFT_v1g174238 Nematostella vectensis NEMVEDRAFT_v1g174238 N 0.714
ENSLOCG00000012593 Lepisosteus oculatus ENSLOCG00000012593 N 0.714
SPU_008177 Strongylocentrotus purpuratus SPU_008177 N 0.714
NFKB2 Echinops telfairi ENSETEG00000002347 I 0.714