ENSXMAG00000015369 (Xiphophorus maculatus)
Rel

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00554 (RHD_DNA_bind) IPR011539 ENSXMAG00000015369 T317599_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NFKB1
M03448_2.00
Homo sapiens
MGGGGAWTCCCCT

AGGGGAWTCCCCK
SELEX
Jolma et al.(2013)
NFKB1_1
0.716 0.716
NFKB1
M05887_2.00
Homo sapiens
NGGKRNTYYCCCN

NGGGRRANYMCCN
SMiLE-seq
Isakova et al.(2017)
NFKB1
0.716 0.716
NFKB1
M09348_2.00
Homo sapiens
HYTTCCCY

RGGGAARD
Misc
Kulakovskiy et al.(2013)
NFKB1_HUMAN.H11MO.0.A
0.716 0.716
NFKB1
M11228_2.00
Homo sapiens
GGGGATYCCC

GGGRATCCCC
Transfac
Matys et al.(2006)
V$NFKAPPAB50_01
0.716 0.716
NFKB1
M11229_2.00
Homo sapiens
NGGGAHTYYCCM

KGGRRADTCCCN
Transfac
Matys et al.(2006)
V$NFKB_C
0.716 0.716
NFKB1
M11230_2.00
Homo sapiens
DKGGGAMTTYCCNN

NNGGRAAKTCCCMH
Transfac
Matys et al.(2006)
V$NFKB_Q6
0.716 0.716
NFKB1
M11231_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$P50_Q6
0.716 0.716
Nfkb1
M09358_2.00
Mus musculus
GGGRNTTYCCC

GGGRAANYCCC
Misc
Kulakovskiy et al.(2013)
NFKB1_MOUSE.H11MO.0.A
0.710 0.710
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSXMAP00000015462 Rel 46 245

Links

Other Rel family TFs
Other Xiphophorus maculatus TFs

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000008882 Ailuropoda melanoleuca ENSAMEG00000008882 I 0.716
ENSAMXG00000003341 Astyanax mexicanus ENSAMXG00000003341 I 0.817
NFKB1 Bos taurus ENSBTAG00000020270 I 0.710
ENSBTAP00000027016-D1 Bos grunniens ENSBTAP00000027016-D1 I 0.710
NFKB1 Canis familiaris ENSCAFG00000010730 I 0.716
NFKB1 Callithrix jacchus ENSCJAG00000015382 I 0.716
NFKB1 Cavia porcellus ENSCPOG00000007789 I 0.716
ENSCSAG00000004049 Chlorocebus sabaeus ENSCSAG00000004049 I 0.716
nfkb1 Danio rerio ENSDARG00000105261 I 0.858
NFKB1 Dasypus novemcinctus ENSDNOG00000006855 I 0.716
Nfkb1 Dipodomys ordii ENSDORG00000007447 I 0.704
NFKB1 Felis catus ENSFCAG00000007557 I 0.716
NFKB2 Homo sapiens ENSG00000077150 D 0.931
NFKB1 Homo sapiens ENSG00000109320 D 0.720
NFKB1 Gasterosteus aculeatus ENSGACG00000016876 I 0.905
NFKB1 Gorilla gorilla ENSGGOG00000009071 I 0.716
ENSGMOG00000007506 Gadus morhua ENSGMOG00000007506 N 0.840
ENSLACG00000002751 Latimeria chalumnae ENSLACG00000002751 I 0.722
NFKB1 Loxodonta africana ENSLAFG00000009344 I 0.716
ENSLOCG00000012080 Lepisosteus oculatus ENSLOCG00000012080 I 0.846
ENSMEUG00000001334 Macropus eugenii ENSMEUG00000001334 I 0.716
NFKB1 Myotis lucifugus ENSMLUG00000005986 I 0.716
NFKB1 Macaca mulatta ENSMMUG00000003736 I 0.716
NFKB1 Monodelphis domestica ENSMODG00000020672 I 0.716
ENSMPUG00000009413 Mustela putorius furo ENSMPUG00000009413 I 0.716
Nfkb1 Mus musculus ENSMUSG00000028163 D 0.776
ENSNLEG00000013325 Nomascus leucogenys ENSNLEG00000013325 I 0.716
ENSOANG00000022123 Ornithorhynchus anatinus ENSOANG00000022123 I 0.701
ENSOANG00000028755 Ornithorhynchus anatinus ENSOANG00000028755 I 0.787
ENSOARG00000012718 Ovis aries ENSOARG00000012718 I 0.710
NFKB1 Oryctolagus cuniculus ENSOCUG00000021712 I 0.716
NFKB1 Otolemur garnettii ENSOGAG00000012840 I 0.716
ENSONIG00000004349 Oreochromis niloticus ENSONIG00000004349 I 0.929
NFKB1 Ochotona princeps ENSOPRG00000005212 I 0.716
ENSP00000226574 Macaca fascicularis ENSP00000226574 I 0.716
ENSPANG00000023882 Papio anubis ENSPANG00000023882 I 0.704
ENSPFOG00000016918 Poecilia formosa ENSPFOG00000016918 I 0.988
ENSPPYG00000014965 Pongo abelii ENSPPYG00000014965 I 0.716
NFKB1 Pan troglodytes ENSPTRG00000016320 I 0.716
NFKB1 Pteropus vampyrus ENSPVAG00000002722 I 0.716
Nfkb1 Rattus norvegicus ENSRNOG00000023258 I 0.716
ENSSHAG00000007374 Sarcophilus harrisii ENSSHAG00000007374 I 0.716
NFKB1 Sus scrofa ENSSSCG00000030957 I 0.905
ENSSTOG00000011445 Ictidomys tridecemlineatus ENSSTOG00000011445 I 0.716
NFKB1 Tupaia belangeri ENSTBEG00000003520 I 0.716
NFKB1 Tetraodon nigroviridis ENSTNIG00000002693 N 0.870
NFKB1 Tursiops truncatus ENSTTRG00000010852 I 0.716
NFKB1 Vicugna pacos ENSVPAG00000000280 I 0.716
Myotis_brandtii_NFKB1_10013135 Myotis brandtii Myotis_brandtii_NFKB1_10013135 I 0.716