Gfo_R000557 (Geospiza fortis)
Rel

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00554 (RHD_DNA_bind) IPR011539 Gfo_R000557 T317782_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ENSGALG00000000671
M02442_2.00 		Gallus gallus
NWTTTCCAYN
NRTGGAAAWN		 PBM
Weirauch et al.(2014)
pTH9263 		0.993 0.993
NFAT5
M03447_2.00 		Homo sapiens
NDGTAMWTTTCCAY
RTGGAAAWKTACHN		 SELEX
Jolma et al.(2013)
NFAT5_1 		0.986 0.986
NFAT5
M05709_2.00 		Homo sapiens
NGTANNWTTCCRY
RYGGAAWNNTACN		 SELEX
Yin et al.(2017)
NFAT5_eDBD_HT-SELEX 		0.986 0.986
NFAT5
M11224_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT5_Q5_01 		0.986 0.986
NFAT5
M11225_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT5_Q5_02 		0.986 0.986
NFAT5
M11226_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT5_Q5_03 		0.986 0.986
NFAT5
M05710_2.00 		Homo sapiens
NGTRNNTTTCCRY
RYGGAAANNYACN		 SELEX
Yin et al.(2017)
NFAT5_eDBD_Methyl-HT-SELEX 		0.986 0.986
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gfo_R000557 Rel 258 415

Links

Other Rel family TFs
Other Geospiza fortis TFs

Invalid Input OrderBy

76 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action