Pvit_10466 (Pogona vitticeps)
Rel

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00554 (RHD_DNA_bind) IPR011539 Pvit_10466 T317818_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Rela
M08039_2.00 		Mus musculus
DGGRVTTTCCM
KGGAAABYCCH		 ChIP-seq
Chen et al.(2011)
SRP001843_p65_Input_LPSstim 		0.731 0.731
Rela
M08038_2.00 		Mus musculus
HHYYYCYYNYHYYYNHYYYYCYWNNSYTBY
RVARSNNWRGRRRRDNRRRDRNRRGRRRDD		 ChIP-seq
Chen et al.(2011)
SRP001843_p65_Input 		0.731 0.731
Rela
M09355_2.00 		Mus musculus
KGGRVTTYCCM
KGGRAABYCCM		 Misc
Kulakovskiy et al.(2013)
TF65_MOUSE.H11MO.0.A 		0.731 0.731
RELA
M02711_2.00 		Homo sapiens
SGGRVTTTCC
GGAAABYCCS		 SELEX
Mathelier et al.(2014)
MA0107.1 		0.713 0.713
RELA
M07999_2.00 		Homo sapiens
DGGGRMTTTCCMVN
NBKGGAAAKYCCCH		 ChIP-seq
Gerstein et al.(2012)
GM10847_NFKB_Stanford 		0.713 0.713
RELA
M08000_2.00 		Homo sapiens
NDGGGRMWTTCCHN
NDGGAAWKYCCCHN		 ChIP-seq
Gerstein et al.(2012)
GM12878_NFKB_Stanford 		0.713 0.713
RELA
M08001_2.00 		Homo sapiens
NDGGGRMTTTCCMVN
NBKGGAAAKYCCCHN		 ChIP-seq
Gerstein et al.(2012)
GM12891_NFKB_Stanford 		0.713 0.713
RELA
M08002_2.00 		Homo sapiens
DGGGRHTTTCCMVNN
NNBKGGAAADYCCCH		 ChIP-seq
Gerstein et al.(2012)
GM12892_NFKB_Stanford 		0.713 0.713
RELA
M08003_2.00 		Homo sapiens
DGGGRVTTTCCHVN
NBDGGAAABYCCCH		 ChIP-seq
Gerstein et al.(2012)
GM15510_NFKB_Stanford 		0.713 0.713
RELA
M08004_2.00 		Homo sapiens
NDGGGRMTTTCCMNN
NNKGGAAAKYCCCHN		 ChIP-seq
Gerstein et al.(2012)
GM18505_NFKB_Stanford 		0.713 0.713
RELA
M08005_2.00 		Homo sapiens
NDGGGRHTTTCCMVN
NBKGGAAADYCCCHN		 ChIP-seq
Gerstein et al.(2012)
GM18526_NFKB_Stanford 		0.713 0.713
RELA
M08006_2.00 		Homo sapiens
GGGRVTTTCCM
KGGAAABYCCC		 ChIP-seq
Gerstein et al.(2012)
GM18951_NFKB_Stanford 		0.713 0.713
RELA
M08007_2.00 		Homo sapiens
DGGGRMTTTCCMV
BKGGAAAKYCCCH		 ChIP-seq
Gerstein et al.(2012)
GM19099_NFKB_Stanford 		0.713 0.713
RELA
M08008_2.00 		Homo sapiens
DGGGRMTTTCCMNNN
NNNKGGAAAKYCCCH		 ChIP-seq
Gerstein et al.(2012)
GM19193_NFKB_Stanford 		0.713 0.713
RELA
M09351_2.00 		Homo sapiens
NWGGGRHWTTCCMV
BKGGAAWDYCCCWN		 Misc
Kulakovskiy et al.(2013)
TF65_HUMAN.H11MO.0.A 		0.713 0.713
RELA
M09626_2.00 		Homo sapiens
DGGGRVWTTCCM
KGGAAWBYCCCH		 Misc
Heinz et al.(2010)
GM12787-p65_GSE19485 		0.713 0.713
RELA
M11237_2.00 		Homo sapiens
BGGRVTTTCC
GGAAABYCCV		 Transfac
Matys et al.(2006)
V$NFKAPPAB65_01 		0.713 0.713
RELA
M11238_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RELA_02 		0.713 0.713
RELA
M11239_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RELA_03 		0.713 0.713
RELA
M11240_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RELA_04 		0.713 0.713
RELA
M11241_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RELA_05 		0.713 0.713
RELA
M11242_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RELA_Q6 		0.713 0.713
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pvit_10466 Rel 24 190

Links

Other Rel family TFs
Other Pogona vitticeps TFs

37 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ogr00666 Ophisaurus gracilis Ogr00666 I 0.922
ENSPSIG00000002944 Pelodiscus sinensis ENSPSIG00000002944 I 0.808
Cmyd_10013204 Chelonia mydas Cmyd_10013204 I 0.796
rela.L Xenopus laevis XB-GENE-946512 I 0.766
RELA Monodelphis domestica ENSMODG00000009603 I 0.766
rela Xenopus tropicalis XB-GENE-946506 I 0.749
RELA Pan troglodytes ENSPTRG00000003889 I 0.741
RELA Macaca mulatta ENSMMUG00000007418 I 0.737
ENSP00000384273 Macaca fascicularis ENSP00000384273 I 0.737
RELA Microcebus murinus ENSMICG00000008872 I 0.737
ENSPANG00000013650 Papio anubis ENSPANG00000013650 I 0.737
ENSPPYG00000003053 Pongo abelii ENSPPYG00000003053 I 0.737
ENSNLEG00000005769 Nomascus leucogenys ENSNLEG00000005769 I 0.737
RELA Homo sapiens ENSG00000173039 D 0.737
ENSCSAG00000007981 Chlorocebus sabaeus ENSCSAG00000007981 I 0.737
RELA Gorilla gorilla ENSGGOG00000011810 I 0.737
RELA Loxodonta africana ENSLAFG00000021967 I 0.737
RELA Cavia porcellus ENSCPOG00000020593 I 0.737
RELA Callithrix jacchus ENSCJAG00000002037 I 0.735
Myotis_brandtii_Rela_10030730 Myotis brandtii Myotis_brandtii_Rela_10030730 I 0.731
RELA Sorex araneus ENSSARG00000003535 I 0.731
RELA Sus scrofa ENSSSCG00000012981 I 0.731
ENSSTOG00000027336 Ictidomys tridecemlineatus ENSSTOG00000027336 I 0.731
Rela Rattus norvegicus ENSRNOG00000030888 I 0.731
RELA Pteropus vampyrus ENSPVAG00000009983 I 0.731
RELA Myotis lucifugus ENSMLUG00000008727 I 0.731
RELA Felis catus ENSFCAG00000005696 I 0.731
Rela Mus musculus ENSMUSG00000024927 D 0.731
RELA Dasypus novemcinctus ENSDNOG00000039743 I 0.731
ENSAMEG00000017369 Ailuropoda melanoleuca ENSAMEG00000017369 I 0.729
ENSP00000384273-D1 Bos grunniens ENSP00000384273-D1 I 0.729
RELA Bos taurus ENSBTAG00000013895 I 0.729
RELA Equus caballus ENSECAG00000013763 I 0.729
RELA Canis familiaris ENSCAFG00000013334 I 0.729
RELA Otolemur garnettii ENSOGAG00000014117 I 0.725
RELA Tursiops truncatus ENSTTRG00000002311 I 0.719
ENSOARG00000017426 Ovis aries ENSOARG00000017426 I 0.713