nfatc2 (Xenopus tropicalis)
Rel

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00554 (RHD_DNA_bind) IPR011539 XB-GENE-492278 T317863_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NFATC2
M02441_2.00
Homo sapiens
WNTTTCCRHN

NDYGGAAANW
PBM
Weirauch et al.(2014)
pTH9196
0.923 0.923
NFATC2
M05705_2.00
Homo sapiens
DTTTCCATGGAAAM

KTTTCCATGGAAAH
SELEX
Yin et al.(2017)
NFATC2_eDBD_HT-SELEX_1
0.923 0.923
NFATC2
M05706_2.00
Homo sapiens
NTTTCCRYNNRYGGAAAN

NTTTCCRYNNRYGGAAAN
SELEX
Yin et al.(2017)
NFATC2_eDBD_HT-SELEX_2
0.923 0.923
NFATC2
M09346_2.00
Homo sapiens
NWTTTTCCW

WGGAAAAWN
Misc
Kulakovskiy et al.(2013)
NFAC2_HUMAN.H11MO.0.B
0.923 0.923
NFATC2
M11221_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NFAT1_Q4
0.923 0.923
NFATC2
M11222_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NFAT1_Q5
0.923 0.923
NFATC2
M11223_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NFAT1_Q6
0.923 0.923
NFATC2
M08462_2.00
Homo sapiens
TTTTCCA

TGGAAAA
COMPILED
Mathelier et al.(2014)
MA0152.1
0.923 0.923
NFATC2
M05707_2.00
Homo sapiens
NTTTCCGCGGAAAN

NTTTCCGCGGAAAN
SELEX
Yin et al.(2017)
NFATC2_eDBD_Methyl-HT-SELEX_1
0.923 0.923
NFATC2
M05708_2.00
Homo sapiens
NTTTCCRYNNRYGGAAAN

NTTTCCRYNNRYGGAAAN
SELEX
Yin et al.(2017)
NFATC2_eDBD_Methyl-HT-SELEX_2
0.923 0.923
Nfatc2
M09357_2.00
Mus musculus
NWTTTTCCW

WGGAAAAWN
Misc
Kulakovskiy et al.(2013)
NFAC2_MOUSE.H11MO.0.C
0.916 0.916
Nfatc1
M09360_2.00
Mus musculus
KABTCANWBTTTCCW

WGGAAAVWNTGAVTM
Misc
Kulakovskiy et al.(2013)
NFAC1_MOUSE.H11MO.0.A
0.839 0.839
NFATC1
M02443_2.00
Meleagris gallopavo
NNTTTCCRNN

NNYGGAAANN
PBM
Weirauch et al.(2014)
pTH8315
0.832 0.832
nfatc1
M02446_2.00
Xenopus tropicalis
NNTTTCCRNN

NNYGGAAANN
PBM
Weirauch et al.(2014)
pTH8557
0.832 0.832
NFATC1
M02444_2.00
Monodelphis domestica
NNDTTCCDNN

NNHGGAAHNN
PBM
Weirauch et al.(2014)
pTH8401
0.818 0.818
ENSTNIG00000018271
M02445_2.00
Tetraodon nigroviridis
DNDTTCCRNN

NNYGGAAHNH
PBM
Weirauch et al.(2014)
pTH9005
0.797 0.797
NFATC3
M02440_2.00
Homo sapiens
DNTTTCCRNN

NNYGGAAANH
PBM
Weirauch et al.(2014)
pTH9192
0.783 0.783
NFATC4
M01306_2.00
Homo sapiens
NNNWWWVYRN

NYRBWWWNNN
PBM
Lambert et al.(2019)
pTH9347
0.783 0.783
NFATC4
M05701_2.00
Homo sapiens
DBTTTCCRYN

NRYGGAAAVH
SELEX
Yin et al.(2017)
NFATC4_eDBD_HT-SELEX_1
0.783 0.783
NFATC4
M05702_2.00
Homo sapiens
NKTTCCATGGAAMV

BKTTCCATGGAAMN
SELEX
Yin et al.(2017)
NFATC4_eDBD_HT-SELEX_2
0.783 0.783
NFATC3
M05693_2.00
Homo sapiens
WNTTTCCRYN

NRYGGAAANW
SELEX
Yin et al.(2017)
NFATC3_eDBD_HT-SELEX_1
0.783 0.783
NFATC3
M05694_2.00
Homo sapiens
NTTTCCATGGAAAN

NTTTCCATGGAAAN
SELEX
Yin et al.(2017)
NFATC3_eDBD_HT-SELEX_2
0.783 0.783
NFATC3
M05695_2.00
Homo sapiens
DYGGAAANNNNNNNTTTCCRH

DYGGAAANNNNNNNTTTCCRH
SELEX
Yin et al.(2017)
NFATC3_eDBD_HT-SELEX_3
0.783 0.783
NFATC3
M09343_2.00
Homo sapiens
RDTTTTCCA

TGGAAAAHY
Misc
Kulakovskiy et al.(2013)
NFAC3_HUMAN.H11MO.0.B
0.783 0.783
NFATC4
M09345_2.00
Homo sapiens
HNDBTTTCCN

NGGAAAVHND
Misc
Kulakovskiy et al.(2013)
NFAC4_HUMAN.H11MO.0.C
0.783 0.783
Nfatc3
M09359_2.00
Mus musculus
RDTTTTCCA

TGGAAAAHY
Misc
Kulakovskiy et al.(2013)
NFAC3_MOUSE.H11MO.0.B
0.783 0.783
Nfatc4
M09354_2.00
Mus musculus
HNDBTTTCCN

NGGAAAVHND
Misc
Kulakovskiy et al.(2013)
NFAC4_MOUSE.H11MO.0.C
0.783 0.783
NFATC4
M11219_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NFAT3_Q3_01
0.783 0.783
NFATC4
M11220_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NFAT3_Q3
0.783 0.783
NFATC3
M11217_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NFAT4_Q3
0.783 0.783
NFATC3
M11218_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NFAT4_Q5
0.783 0.783
NFATC4
M05703_2.00
Homo sapiens
DNTTTCCRYN

NRYGGAAANH
SELEX
Yin et al.(2017)
NFATC4_eDBD_Methyl-HT-SELEX_1
0.783 0.783
NFATC4
M05704_2.00
Homo sapiens
NKTTCCRYGGAAMN

NKTTCCRYGGAAMN
SELEX
Yin et al.(2017)
NFATC4_eDBD_Methyl-HT-SELEX_2
0.783 0.783
NFATC3
M05696_2.00
Homo sapiens
WNTTTCCRYN

NRYGGAAANW
SELEX
Yin et al.(2017)
NFATC3_eDBD_Methyl-HT-SELEX_1
0.783 0.783
NFATC3
M05697_2.00
Homo sapiens
NTTTCCRYGGAAAN

NTTTCCRYGGAAAN
SELEX
Yin et al.(2017)
NFATC3_eDBD_Methyl-HT-SELEX_2
0.783 0.783
NFATC3
M05698_2.00
Homo sapiens
RYGGAAANHNNNDNTTTCCRY

RYGGAAANHNNNDNTTTCCRY
SELEX
Yin et al.(2017)
NFATC3_eDBD_Methyl-HT-SELEX_3
0.783 0.783
NFATC1
M03449_2.00
Homo sapiens
HKGRAAADDNWBTTTCCAYN

NRTGGAAAVWNHHTTTYCMD
SELEX
Jolma et al.(2013)
NFATC1_1
0.776 0.776
NFATC1
M03450_2.00
Homo sapiens
TTTCCAYWRYGGAAA

TTTCCRYWRTGGAAA
SELEX
Jolma et al.(2013)
NFATC1_2
0.776 0.776
NFATC1
M03451_2.00
Homo sapiens
NTTTCCATGGAAAN

NTTTCCATGGAAAN
SELEX
Jolma et al.(2013)
NFATC1_3
0.776 0.776
NFATC1
M02747_2.00
Homo sapiens
DTTCCRYGGAA

TTCCRYGGAAH
SELEX
Jolma et al.(2010)
NFATc1_dimer
0.776 0.776
NFATC1
M02748_2.00
Homo sapiens
GGAANDTTCC

GGAAHNTTCC
SELEX
Jolma et al.(2010)
NFATc1_dimer_type2
0.776 0.776
NFATC1
M02749_2.00
Homo sapiens
WDTTTCCAY

RTGGAAAHW
SELEX
Jolma et al.(2010)
NFATc1_monomer
0.776 0.776
NFATC1
M05711_2.00
Homo sapiens
NTTTCCATGGAAAN

NTTTCCATGGAAAN
SELEX
Yin et al.(2017)
NFATC1_eDBD_HT-SELEX_1
0.776 0.776
NFATC1
M05712_2.00
Homo sapiens
NTTTCCRYNNRYGGAAAN

NTTTCCRYNNRYGGAAAN
SELEX
Yin et al.(2017)
NFATC1_eDBD_HT-SELEX_2
0.776 0.776
NFATC1
M09349_2.00
Homo sapiens
HBYHWBWBTTTCCWB

VWGGAAAVWVWDRVD
Misc
Kulakovskiy et al.(2013)
NFAC1_HUMAN.H11MO.0.B
0.776 0.776
NFATC1
M09625_2.00
Homo sapiens
WBTTTCCAYY

RRTGGAAAVW
Misc
Heinz et al.(2010)
Jurkat-NFATC1_Jolma_et_al.
0.776 0.776
NFATC1
M11232_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NFAT2_Q4
0.776 0.776
NFATC1
M11233_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NFAT2_Q5_01
0.776 0.776
NFATC1
M11234_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NFAT2_Q5
0.776 0.776
NFATC1
M05713_2.00
Homo sapiens
NTTTCCRYGGAAAN

NTTTCCRYGGAAAN
SELEX
Yin et al.(2017)
NFATC1_eDBD_Methyl-HT-SELEX_1
0.776 0.776
NFATC1
M05714_2.00
Homo sapiens
NTTTCCRYNNRYGGAAAN

NTTTCCRYNNRYGGAAAN
SELEX
Yin et al.(2017)
NFATC1_eDBD_Methyl-HT-SELEX_2
0.776 0.776
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
XP_002933215 Rel 300 460

Links

Other Rel family TFs
Other Xenopus tropicalis TFs

237 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AMTR_s00186p00018500 Amborella trichopoda AMTR_s00186p00018500 N 0.000
Aquca_014_00370 Aquilegia coerulea Aquca_014_00370 N 0.000
SCL1 Arabidopsis lyrata fgenesh2_kg.1__2335__AT1G21450.1 N 0.000
SCL1 Arabidopsis thaliana AT1G21450 N 0.000
Bostr.25570s0024 Boechera stricta Bostr.25570s0024 N 0.000
Bo7g059410 Brassica oleracea Bo7g059410 N 0.000
Bo5g034360 Brassica oleracea Bo5g034360 N 0.000
Bra017915 Brassica rapa Bra017915 N 0.000
Bra012280 Brassica rapa Bra012280 N 0.000
PK29476.1 Cannabis sativa PK29476.1 N 0.000
Cagra.1632s0036 Capsella grandiflora Cagra.1632s0036 N 0.000
Carubv10008658m.g Capsella rubella Carubv10008658m.g N 0.000
evm.TU.supercontig_26.96 Carica papaya evm.TU.supercontig_26.96 N 0.000
Ca_13102 Cicer arietinum Ca_13102 N 0.000
Ca_03920 Cicer arietinum Ca_03920 N 0.000
Cla015267 Citrullus lanatus Cla015267 N 0.000
orange1.1g007853m.g Citrus sinensis orange1.1g007853m.g N 0.000
Cucsa.079150 Cucumis sativus Cucsa.079150 N 0.000
Eucgr.F04276 Eucalyptus grandis Eucgr.F04276 N 0.000
Thhalv10007142m.g Eutrema salsugineum Thhalv10007142m.g N 0.000
gene01015-v1.0-hybrid Fragaria vesca gene01015-v1.0-hybrid N 0.000
GLYMA14G27290 Glycine max GLYMA14G27290 N 0.000
GLYMA04G42090 Glycine max GLYMA04G42090 N 0.000
GLYMA06G12701 Glycine max GLYMA06G12701 N 0.000
GLYMA13G09220 Glycine max GLYMA13G09220 N 0.000
Gorai.009G251800 Gossypium raimondii Gorai.009G251800 N 0.000
Gorai.005G083700 Gossypium raimondii Gorai.005G083700 N 0.000
LPERR01G33950 Leersia perrieri LPERR01G33950 N 0.000
Lus10029747.g Linum usitatissimum Lus10029747.g N 0.000
Lus10042776.g Linum usitatissimum Lus10042776.g N 0.000
chr1.CM0982.460.nd Lotus japonicus chr1.CM0982.460.nd N 0.000
MDP0000859087 Malus domestica MDP0000859087 N 0.000
MDP0000727836 Malus domestica MDP0000727836 N 0.000
cassava26784.m1 Manihot esculenta cassava26784.m1 N 0.000
cassava42388.valid.m1 Manihot esculenta cassava42388.valid.m1 N 0.000
MTR_1g029420 Medicago truncatula MTR_1g029420 N 0.000
MTR_3g089055 Medicago truncatula MTR_3g089055 N 0.000
mgf010500m Mimulus guttatus mgf010500m N 0.000
GSMUA_Achr10G17290_001 Musa acuminata GSMUA_Achr10G17290_001 N 0.000
GSMUA_Achr3G02410_001 Musa acuminata GSMUA_Achr3G02410_001 N 0.000
GSMUA_Achr6G11780_001 Musa acuminata GSMUA_Achr6G11780_001 N 0.000
OBART01G39420 Oryza barthii OBART01G39420 N 0.000
OB01G48180 Oryza brachyantha OB01G48180 N 0.000
ORGLA01G0333300 Oryza glaberrima ORGLA01G0333300 N 0.000
OGLUM01G43650 Oryza glumaepatula OGLUM01G43650 N 0.000
OLONG_003002 Oryza longistaminata OLONG_003002 N 0.000
OMERI01G36330 Oryza meridionalis OMERI01G36330 N 0.000
ONIVA01G44280 Oryza nivara ONIVA01G44280 N 0.000
OPUNC01G38160 Oryza punctata OPUNC01G38160 N 0.000
ORUFI01G42800 Oryza rufipogon ORUFI01G42800 N 0.000
OS01G0881500 Oryza sativa OS01G0881500 N 0.000
PDK_20s1392371g003 Phoenix dactylifera PDK_20s1392371g003 N 0.000
POPTR_0005s20890 Populus trichocarpa POPTR_0005s20890 N 0.000
POPTR_0002s07430 Populus trichocarpa POPTR_0002s07430 N 0.000
Pm022704 Prunus mume Pm022704 N 0.000
PRUPE_ppa003310mg Prunus persica PRUPE_ppa003310mg N 0.000
29648.m001919 Ricinus communis 29648.m001919 N 0.000
SapurV1A.0267s0240 Salix purpurea SapurV1A.0267s0240 N 0.000
SapurV1A.0261s0120 Salix purpurea SapurV1A.0261s0120 N 0.000
Solyc04g064550.1 Solanum lycopersicum Solyc04g064550.1 N 0.000
PGSC0003DMG400024853 Solanum tuberosum PGSC0003DMG400024853 N 0.000
TCM_035362 Theobroma cacao TCM_035362 N 0.000
SCL1 Vitis vinifera VIT_18s0001g15270 N 0.000
VIT_04s0044g01370 Vitis vinifera VIT_04s0044g01370 N 0.000