rel (Xenopus tropicalis)
Rel

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00554 (RHD_DNA_bind) IPR011539 XB-GENE-993262 T317878_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
REL
M02710_2.00
Homo sapiens
BGGRNWTTCC

GGAAWNYCCV
SELEX
Mathelier et al.(2014)
MA0101.1
0.793 0.793
REL
M09350_2.00
Homo sapiens
TGKVMTTYCCCHDBH

DVHDGGGRAAKBMCA
Misc
Kulakovskiy et al.(2013)
REL_HUMAN.H11MO.0.B
0.793 0.793
REL
M11235_2.00
Homo sapiens
BGGRNWTTCC

GGAAWNYCCV
Transfac
Matys et al.(2006)
V$CREL_01
0.793 0.793
REL
M11236_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CREL_Q6
0.793 0.793
Rel
M09353_2.00
Mus musculus
TGKVMTTYCCCHDBH

DVHDGGGRAAKBMCA
Misc
Kulakovskiy et al.(2013)
REL_MOUSE.H11MO.0.A
0.775 0.775
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAI36177 Rel 22 190

Links

Other Rel family TFs
Other Xenopus tropicalis TFs

59 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
rel.L Xenopus laevis XB-GENE-993266 I 0.953
rel.S Xenopus laevis XB-GENE-17342653 I 0.935
REL Felis catus ENSFCAG00000008018 I 0.793
REL Homo sapiens ENSG00000162924 D 0.793
ENSNLEG00000009519 Nomascus leucogenys ENSNLEG00000009519 I 0.793
ENSPPYG00000012391 Pongo abelii ENSPPYG00000012391 I 0.793
ENSAMEG00000018236 Ailuropoda melanoleuca ENSAMEG00000018236 I 0.793
REL Pan troglodytes ENSPTRG00000011949 I 0.793
REL Canis familiaris ENSCAFG00000002981 I 0.793
REL Oryctolagus cuniculus ENSOCUG00000004968 I 0.787
REL Ornithorhynchus anatinus ENSOANG00000012405 I 0.787
ENSMMUP00000014199 Macaca fascicularis ENSMMUP00000014199 I 0.787
REL Gorilla gorilla ENSGGOG00000024826 I 0.787
ENSPANG00000006148 Papio anubis ENSPANG00000006148 I 0.787
REL Macaca mulatta ENSMMUG00000010834 I 0.787
REL Equus caballus ENSECAG00000003277 I 0.787
REL Monodelphis domestica ENSMODG00000002172 I 0.781
ENSSTOG00000005785 Ictidomys tridecemlineatus ENSSTOG00000005785 I 0.781
REL Vicugna pacos ENSVPAG00000000493 I 0.781
ENSTSYG00000012918 Tarsius syrichta ENSTSYG00000012918 I 0.781
Rel Rattus norvegicus ENSRNOG00000054437 I 0.781
REL Otolemur garnettii ENSOGAG00000013722 I 0.781
ENSLACG00000008544 Latimeria chalumnae ENSLACG00000008544 I 0.781
REL Callithrix jacchus ENSCJAG00000008975 I 0.781
REL Loxodonta africana ENSLAFG00000013507 I 0.775
ENSOARG00000001457 Ovis aries ENSOARG00000001457 I 0.775
REL Cavia porcellus ENSCPOG00000011659 I 0.775
ENSMPUG00000005180 Mustela putorius furo ENSMPUG00000005180 I 0.775
Rel Mus musculus ENSMUSG00000020275 D 0.775
REL Bos taurus ENSBTAG00000015386 I 0.769
ENSP00000295025-D1 Bos grunniens ENSP00000295025-D1 I 0.769
ENSSHAG00000014405 Sarcophilus harrisii ENSSHAG00000014405 I 0.769
ENSETEG00000002607 Echinops telfairi ENSETEG00000002607 I 0.766
REL Choloepus hoffmanni ENSCHOG00000010935 I 0.766
Brh_R000963 Buceros rhinoceros Brh_R000963 I 0.763
ENSFALG00000011066 Ficedula albicollis ENSFALG00000011066 I 0.763
REL Myotis lucifugus ENSMLUG00000007454 I 0.757
Aan_R006375 Calypte anna Aan_R006375 I 0.757
REL Sorex araneus ENSSARG00000011809 I 0.757
Afo_R011359 Aptenodytes forsteri Afo_R011359 I 0.757
Gfo_R008165 Geospiza fortis Gfo_R008165 I 0.751
REL Meleagris gallopavo ENSMGAG00000001721 I 0.751
REL Gallus gallus ENSGALG00000007845 I 0.751
REL Taeniopygia guttata ENSTGUG00000006743 I 0.751
Myotis_brandtii_REL_10034307 Myotis brandtii Myotis_brandtii_REL_10034307 I 0.747
ENSLOCG00000016127 Lepisosteus oculatus ENSLOCG00000016127 I 0.746
REL Pteropus vampyrus ENSPVAG00000000364 I 0.740
ENSPSIG00000013860 Pelodiscus sinensis ENSPSIG00000013860 I 0.740
Cmyd_10008594 Chelonia mydas Cmyd_10008594 I 0.740
ENSONIG00000002983 Oreochromis niloticus ENSONIG00000002983 I 0.734
ENSAPLG00000006795 Anas platyrhynchos ENSAPLG00000006795 I 0.728
Pvit_04537 Pogona vitticeps Pvit_04537 I 0.728
REL Sus scrofa ENSSSCG00000008388 I 0.722
rel Oryzias latipes ENSORLG00000001586 I 0.716
ENSXMAG00000007379 Xiphophorus maculatus ENSXMAG00000007379 I 0.710
ENSPFOG00000013038 Poecilia formosa ENSPFOG00000013038 I 0.710
rel Danio rerio ENSDARG00000055276 I 0.710
ENSAMXG00000004647 Astyanax mexicanus ENSAMXG00000004647 I 0.704
Tal_R011178 Tyto alba Tal_R011178 I 0.700