CERSUDRAFT_149026 (Ceriporiopsis subvermispora)
RFX

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02257 (RFX_DNA_binding) IPR003150 CERSUDRAFT_149026 T318062_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RFX1
M00066_2.00
Saccharomyces cerevisiae
NSGTTGCYAN

NTRGCAACSN
PBM
Badis et al.(2008)
RFX1_4537
0.653 0.430
RFX1
M07494_2.00
Saccharomyces cerevisiae
BGTTRCYA

TRGYAACV
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0365.1
0.653 0.430
RFX1
M08600_2.00
Saccharomyces cerevisiae
CGTYRBYAYRGYWACM

KGTWRCYRTRVYRACG
Misc
DeBoer et al.(2011)
YLR176C_1478
0.653 0.430
RFX1
M08601_2.00
Saccharomyces cerevisiae
BGTTRCYA

TRGYAACV
Misc
DeBoer et al.(2011)
YLR176C_496
0.653 0.430
RFX1
M11251_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$RFX1_02
0.653 0.430
For this family, TFs with SR scores > 0.650 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EMD40705 RFX 215 293

Links

Other RFX family TFs
Other Ceriporiopsis subvermispora TFs

119 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
nAv.1.0.1.g06901 Acanthocheilonema viteae nAv.1.0.1.g06901 I 0.650
ACRE_029400 Acremonium chrysogenum ACRE_029400 I 0.652
AGABI2DRAFT_184602 Agaricus bisporus AGABI2DRAFT_184602 I 0.783
M378DRAFT_67300 Amanita muscaria M378DRAFT_67300 I 0.783
ALUE_0001355401 Ascaris lumbricoides ALUE_0001355401 I 0.650
ASU_01592 Ascaris suum ASU_01592 I 0.650
AGOS_AAL010W Ashbya gossypii AGOS_AAL010W I 0.651
BAUCODRAFT_23427 Baudoinia compniacensis BAUCODRAFT_23427 I 0.655
BDDG_02784 Blastomyces dermatitidis BDDG_02784 I 0.655
BOTBODRAFT_100719 Botryobasidium botryosum BOTBODRAFT_100719 N 0.775
estExt_fgenesh2_pg.C_4710022 Branchiostoma floridae estExt_fgenesh2_pg.C_4710022 I 0.650
Bm3804 Brugia malayi Bm3804 I 0.650
BXY_1592600 Bursaphelenchus xylophilus BXY_1592600 I 0.651
PVAR5_6603 Byssochlamys spectabilis PVAR5_6603 I 0.651
CAGL0B04895g Candida glabrata CAGL0B04895g I 0.655
CAGL0H03751g Candida glabrata CAGL0H03751g I 0.656
CAOG_00356 Capsaspora owczarzaki CAOG_00356 I 0.650
CC1G_00311 Coprinopsis cinerea CC1G_00311 I 0.775
DACRYDRAFT_45233 Dacryopinax sp DACRYDRAFT_45233 I 0.759
DICSQDRAFT_106385 Dichomitus squalens DICSQDRAFT_106385 I 0.786
nDi.2.2.2.g03767 Dirofilaria immitis nDi.2.2.2.g03767 I 0.650
DOTSEDRAFT_132769 Dothistroma septosporum DOTSEDRAFT_132769 I 0.654
EEL_0000135001 Elaeophora elaphi EEL_0000135001 I 0.650
EVEC_0001085201 Enterobius vermicularis EVEC_0001085201 I 0.657
FIBRA_04592 Fibroporia radiculosa FIBRA_04592 I 0.782
FOMPIDRAFT_1038544 Fomitopsis pinicola FOMPIDRAFT_1038544 I 0.783
GALMADRAFT_236082 Galerina marginata GALMADRAFT_236082 I 0.783
GPLIN_000191300 Globodera pallida GPLIN_000191300 I 0.667
GLOTRDRAFT_32962 Gloeophyllum trabeum GLOTRDRAFT_32962 I 0.782
M413DRAFT_306124 Hebeloma cylindrosporum M413DRAFT_306124 I 0.783
HelroG82191 Helobdella robusta HelroG82191 I 0.654
EuGene4000430 Heterobasidion annosum EuGene4000430 I 0.783
HETIRDRAFT_170415 Heterobasidion irregulare HETIRDRAFT_170415 I 0.783
HCBG_05483 Histoplasma capsulatum HCBG_05483 I 0.653
JAAARDRAFT_166855 Jaapia argillacea JAAARDRAFT_166855 I 0.782
KAFR_0I02180 Kazachstania africana KAFR_0I02180 I 0.651
PAS_chr2-2_0153 Komagataella pastoris PAS_chr2-2_0153 I 0.652
K443DRAFT_673983 Laccaria amethystina K443DRAFT_673983 I 0.783
LACBIDRAFT_311799 Laccaria bicolor LACBIDRAFT_311799 I 0.783
SAKL0D08734g Lachancea kluyveri SAKL0D08734g I 0.652
nLs.2.1.2.g03959 Litomosoides sigmodontis nLs.2.1.2.g03959 I 0.650
LOAG_17230 Loa loa LOAG_17230 I 0.650
MVLG_04348 Microbotryum violaceum MVLG_04348 I 0.685
GNLVRS01_PISO0E08012g Millerozyma farinosa GNLVRS01_PISO0E08012g I 0.651
GNLVRS01_PISO0F09355g Millerozyma farinosa GNLVRS01_PISO0F09355g I 0.651
E5Q_03025 Mixia osmundae E5Q_03025 I 0.698
E5Q_03026 Mixia osmundae E5Q_03026 I 0.698
ML02801a Mnemiopsis leidyi ML02801a I 0.651
Moror_7356 Moniliophthora roreri Moror_7356 N 0.778
gw1.15.255.1 Mycosphaerella fijiensis gw1.15.255.1 I 0.655
estExt_fgenesh1_pg.C_chr_80140 Mycosphaerella graminicola estExt_fgenesh1_pg.C_chr_80140 I 0.656
NEPG_00460 Nematocida parisii ertm1 NEPG_00460 I 0.659
NERG_01713 Nematocida sp NERG_01713 I 0.662
OFLC_0000277501 Onchocerca flexuosa OFLC_0000277501 I 0.650
nOo.2.0.1.g04858 Onchocerca ochengi nOo.2.0.1.g04858 I 0.650
WBGene00247845 Onchocerca volvulus WBGene00247845 I 0.650
PABG_06744 Paracoccidioides brasiliensis PABG_06744 I 0.652
PAAG_00480 Paracoccidioides sp lutzii PAAG_00480 I 0.652
PAXRUDRAFT_31952 Paxillus rubicundulus PAXRUDRAFT_31952 I 0.778
PMAA_084960 Penicillium marneffei PMAA_084960 I 0.651
PHACADRAFT_25186 Phanerochaete carnosa PHACADRAFT_25186 I 0.783
fgenesh1_pg.C_scaffold_2000774 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_2000774 I 0.783
PHLGIDRAFT_115381 Phlebiopsis gigantea PHLGIDRAFT_115381 I 0.783
XP_002492053.1 Pichia pastoris XP_002492053.1 I 0.652
estExt_genewise1_worm.C_chr_6.10133 Pichia stipitis estExt_genewise1_worm.C_chr_6.10133 I 0.652
PILCRDRAFT_94503 Piloderma croceum PILCRDRAFT_94503 I 0.783
PIIN_08876 Piriformospora indica PIIN_08876 N 0.771
PISMIDRAFT_670796 Pisolithus microcarpus PISMIDRAFT_670796 I 0.781
M404DRAFT_124798 Pisolithus tinctorius M404DRAFT_124798 I 0.781
PLEOSDRAFT_1038101 Pleurotus ostreatus PLEOSDRAFT_1038101 I 0.778
PredSwiss_ASS2010_3110.1 Pneumocystis carinii PredSwiss_ASS2010_3110.1 I 0.663
PredSwiss_CON653.4 Pneumocystis carinii PredSwiss_CON653.4 I 0.663
PNEG_02893 Pneumocystis murina PNEG_02893 I 0.663
scaffold324-EXSNAP2012.23 Pristionchus exspectatus scaffold324-EXSNAP2012.23 I 0.650
MYCFIDRAFT_10959 Pseudocercospora fijiensis MYCFIDRAFT_10959 I 0.655
PAN0_021d6025 Pseudozyma antarctica PAN0_021d6025 N 0.651
PaG_06171 Pseudozyma aphidis PaG_06171 N 0.651
PHSY_002871 Pseudozyma hubeiensis PHSY_002871 N 0.652
PGTG_11391 Puccinia graminis PGTG_11391 I 0.725
PTTG_01668 Puccinia triticina PTTG_01668 I 0.706
V565_046180 Rhizoctonia solani V565_046180 N 0.769
O9G_004738 Rozella allomycis O9G_004738 I 0.666
RFX1 Saccharomyces cerevisiae YLR176C D 0.653
14959_Multiple Saccharomyces mikatae 14959_Multiple I 0.653
16177_Multiple Saccharomyces paradoxus 16177_Multiple I 0.653
AACERI_AaceriAAL010W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAAL010W I 0.651
PTSG_10225 Salpingoeca rosetta PTSG_10225 I 0.653
PICST_78645 Scheffersomyces stipitis PICST_78645 I 0.651
SCHCODRAFT_71685 Schizophyllum commune SCHCODRAFT_71685 I 0.783
SPOG_03909 Schizosaccharomyces cryophilus SPOG_03909 I 0.651
SJAG_04839 Schizosaccharomyces japonicus SJAG_04839 I 0.658
SOCG_01623 Schizosaccharomyces octosporus SOCG_01623 I 0.652
sak1 Schizosaccharomyces pombe SPAC3G9.14 I 0.658
SCLCIDRAFT_138144 Scleroderma citrinum SCLCIDRAFT_138144 I 0.781
M408DRAFT_113587 Serendipita vermifera M408DRAFT_113587 N 0.766
SERLA73DRAFT_85891 Serpula lacrymans SERLA73DRAFT_85891 I 0.783
SPAPADRAFT_70246 Spathaspora passalidarum SPAPADRAFT_70246 I 0.652
SEPMUDRAFT_46603 Sphaerulina musiva SEPMUDRAFT_46603 I 0.652
SPPG_01648 Spizellomyces punctatus SPPG_01648 I 0.675
sr13205 Sporisorium reilianum sr13205 N 0.652
CY34DRAFT_103779 Suillus luteus CY34DRAFT_103779 I 0.783
SMUV_0001085601 Syphacia muris SMUV_0001085601 I 0.658
PMAA_084960 Talaromyces marneffei PMAA_084960 I 0.651
TSTA_119980 Talaromyces stipitatus TSTA_119980 I 0.651
tetur19g03130 Tetranychus urticae tetur19g03130 I 0.655
TCNE_0001843801 Toxocara canis TCNE_0001843801 I 0.650
BN946_scf184858.g55 Trametes cinnabarina BN946_scf184858.g55 I 0.786
fgeneshTM_pg.2_#_559 Tremella mesenterica fgeneshTM_pg.2_#_559 I 0.693
A1Q1_00828 Trichosporon asahii A1Q1_00828 I 0.670
GSTUM_00005211001 Tuber melanosporum GSTUM_00005211001 I 0.662
M407DRAFT_70388 Tulasnella calospora M407DRAFT_70388 I 0.775
UHOR_03310 Ustilago hordei UHOR_03310 N 0.652
UM06308 Ustilago maydis UM06308 N 0.651
WUBG_07284 Wuchereria bancrofti WUBG_07284 I 0.650
YALI0_E13596g Yarrowia lipolytica YALI0_E13596g I 0.656
ZBAI_03427 Zygosaccharomyces bailii ZBAI_03427 I 0.651
ZBAI_08430 Zygosaccharomyces bailii ZBAI_08430 I 0.651
ZYRO0E04642g Zygosaccharomyces rouxii ZYRO0E04642g I 0.654
Mycgr3G110369 Zymoseptoria tritici Mycgr3G110369 I 0.656