CH063_09103 (Colletotrichum higginsianum)
RFX

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02257 (RFX_DNA_binding) IPR003150 CH063_09103 T318071_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RFX1
M00066_2.00
Saccharomyces cerevisiae
NSGTTGCYAN

NTRGCAACSN
PBM
Badis et al.(2008)
RFX1_4537
0.671 0.506
RFX1
M07494_2.00
Saccharomyces cerevisiae
BGTTRCYA

TRGYAACV
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0365.1
0.671 0.506
RFX1
M08600_2.00
Saccharomyces cerevisiae
CGTYRBYAYRGYWACM

KGTWRCYRTRVYRACG
Misc
DeBoer et al.(2011)
YLR176C_1478
0.671 0.506
RFX1
M08601_2.00
Saccharomyces cerevisiae
BGTTRCYA

TRGYAACV
Misc
DeBoer et al.(2011)
YLR176C_496
0.671 0.506
RFX1
M11251_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$RFX1_02
0.671 0.506
daf-19
M00709_2.00
Caenorhabditis elegans
SGTTRCTADG

CHTAGYAACS
PBM
Narasimhan et al.(2015)
pTH10021
0.656 0.455
For this family, TFs with SR scores > 0.650 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CCF37865 RFX 203 279

Links

Other RFX family TFs
Other Colletotrichum higginsianum TFs

228 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
14959_Multiple Saccharomyces mikatae 14959_Multiple I 0.671
16177_Multiple Saccharomyces paradoxus 16177_Multiple I 0.671
A1O1_08600 Capronia coronata A1O1_08600 I 0.712
A1O3_08026 Capronia epimyces A1O3_08026 I 0.712
A1O5_04383 Cladophialophora psammophila A1O5_04383 I 0.712
A1O7_03561 Cladophialophora yegresii A1O7_03561 I 0.711
A1O9_03272 Exophiala aquamarina A1O9_03272 I 0.711
AACERI_AaceriAAL010W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAAL010W I 0.675
Aan_R008768 Calypte anna Aan_R008768 I 0.656
AB07822.1 Alternaria brassicicola AB07822.1 I 0.728
ACRE_029400 Acremonium chrysogenum ACRE_029400 I 0.719
ACYPI002124 Acyrthosiphon pisum ACYPI002124 I 0.662
AGOS_AAL010W Ashbya gossypii AGOS_AAL010W I 0.675
AMAG_10999 Allomyces macrogynus AMAG_10999 I 0.651
AMAG_11601 Allomyces macrogynus AMAG_11601 I 0.651
AOL_s00215g602 Arthrobotrys oligospora AOL_s00215g602 I 0.697
Aqu1.223787 Amphimedon queenslandica Aqu1.223787 I 0.651
ARB_07111 Arthroderma benhamiae ARB_07111 I 0.722
AUEXF2481DRAFT_78728 Aureobasidium subglaciale AUEXF2481DRAFT_78728 I 0.735
BAUCODRAFT_23427 Baudoinia compniacensis BAUCODRAFT_23427 I 0.725
BBA_07182 Beauveria bassiana BBA_07182 I 0.770
Bcin03g02360 Botrytis cinerea Bcin03g02360 I 0.755
BDDG_02784 Blastomyces dermatitidis BDDG_02784 I 0.716
BGHDH14_bgh05888 Blumeria graminis BGHDH14_bgh05888 I 0.742
BN7_2967 Wickerhamomyces ciferrii BN7_2967 I 0.680
ACLA_009440 Aspergillus clavatus CADACLAG00001004 I 0.722
CADAFLAG00010851 Aspergillus flavus CADAFLAG00010851 I 0.722
AFUA_5G06120 Aspergillus fumigatus CADAFUAG00006202 I 0.722
CADANGAG00013568 Aspergillus niger CADANGAG00013568 I 0.722
ANIA_02296 Aspergillus nidulans CADANIAG00008989 I 0.722
CADAORAG00004061 Aspergillus oryzae CADAORAG00004061 I 0.722
ATEG_09416 Aspergillus terreus CADATEAG00008983 I 0.722
NFIA_036980 Neosartorya fischeri CADNFIAG00003299 I 0.722
CAGL0B04895g Candida glabrata CAGL0B04895g I 0.669
CAGL0H03751g Candida glabrata CAGL0H03751g I 0.659
CaO19.11346 Candida albicans CaO19.11346 I 0.673
CaO19.3865 Candida albicans CaO19.3865 I 0.673
CAOG_00356 Capsaspora owczarzaki CAOG_00356 I 0.671
CapteG168129 Capitella teleta CapteG168129 I 0.650
CCM_03895 Cordyceps militaris CCM_03895 I 0.772
CD36_31600 Candida dubliniensis CD36_31600 I 0.673
CFIO01_07583 Colletotrichum fioriniae CFIO01_07583 I 0.779
CGGC5_15149 Colletotrichum gloeosporioides CGGC5_15149 I 0.770
CIMG_05985 Coccidioides immitis CIMG_05985 I 0.722
CLUG_05348 Candida lusitaniae CLUG_05348 I 0.676
CLUG_05348 Clavispora lusitaniae CLUG_05348 I 0.676
CMQ_5960 Grosmannia clavigera CMQ_5960 I 0.766
Cmyd_10003770 Chelonia mydas Cmyd_10003770 I 0.651
Cob_11986 Colletotrichum orbiculare Cob_11986 I 0.774
COCC4DRAFT_162970 Bipolaris maydis COCC4DRAFT_162970 I 0.729
COCCADRAFT_29061 Bipolaris zeicola COCCADRAFT_29061 I 0.729
COCMIDRAFT_23254 Bipolaris oryzae COCMIDRAFT_23254 I 0.729
COCSADRAFT_34318 Bipolaris sorokiniana COCSADRAFT_34318 I 0.729
COCVIDRAFT_40879 Bipolaris victoriae COCVIDRAFT_40879 I 0.729
CORT_0D05100 Candida orthopsilosis CORT_0D05100 I 0.671
CPAG_04140 Candida parapsilosis CPAG_04140 I 0.671
CPC735_025690 Coccidioides posadasii CPC735_025690 I 0.722
CPUR_03868 Claviceps purpurea CPUR_03868 I 0.769
CSUB01_01029 Colletotrichum sublineola CSUB01_01029 I 0.779
CTHT_0028340 Chaetomium thermophilum CTHT_0028340 I 0.754
CTRG_00624 Candida tropicalis CTRG_00624 I 0.665
DEHA2G10868g Debaryomyces hansenii DEHA2G10868g I 0.686
DILT_0000443401 Diphyllobothrium latum DILT_0000443401 I 0.656
DOTSEDRAFT_132769 Dothistroma septosporum DOTSEDRAFT_132769 I 0.726
DRE_06212 Drechslerella stenobrocha DRE_06212 I 0.697
EPUS_04947 Endocarpon pusillum EPUS_04947 I 0.711
estExt_fgenesh1_pg.C_chr_80140 Mycosphaerella graminicola estExt_fgenesh1_pg.C_chr_80140 I 0.728
estExt_fgenesh2_pg.C_10713 Neurospora discreta estExt_fgenesh2_pg.C_10713 I 0.764
estExt_fgenesh2_pg.C_4710022 Branchiostoma floridae estExt_fgenesh2_pg.C_4710022 I 0.652
estExt_genewise1_worm.C_chr_6.10133 Pichia stipitis estExt_genewise1_worm.C_chr_6.10133 I 0.680
EURHEDRAFT_516724 Aspergillus ruber EURHEDRAFT_516724 I 0.722
EV44_g5273 Erysiphe necator EV44_g5273 I 0.760
e_gw1.6.922.1 Nectria haematococca e_gw1.6.922.1 I 0.769
F503_07504 Ophiostoma piceae uamh F503_07504 I 0.765
FFUJ_02499 Fusarium fujikuroi FFUJ_02499 I 0.756
fgenesh1_pg.00162_#_176 Aspergillus carbonarius fgenesh1_pg.00162_#_176 I 0.722
fgenesh1_pg.C_scaffold_1001176 Cryphonectria parasitica fgenesh1_pg.C_scaffold_1001176 I 0.739
fgeneshMC_pg.6_#_740 Mucor circinelloides fgeneshMC_pg.6_#_740 I 0.651
FGRRES_07420 Fusarium graminearum FGRRES_07420 I 0.754
FOXG_01471 Fusarium oxysporum FOXG_01471 I 0.756
FPSE_09383 Fusarium pseudograminearum FPSE_09383 I 0.738
FVEG_07837 Fusarium verticillioides FVEG_07837 I 0.756
G210_0560 Candida maltosa G210_0560 I 0.664
G647_04815 Cladophialophora carrionii G647_04815 I 0.712
GGTG_07952 Gaeumannomyces graminis GGTG_07952 I 0.769
GLRG_03233 Colletotrichum graminicola GLRG_03233 I 0.775
GMDG_00789 Pseudogymnoascus destructans GMDG_00789 I 0.759
GNLVRS01_PISO0E08012g Millerozyma farinosa GNLVRS01_PISO0E08012g I 0.684
GNLVRS01_PISO0F09355g Millerozyma farinosa GNLVRS01_PISO0F09355g I 0.684
GSTUM_00005211001 Tuber melanosporum GSTUM_00005211001 I 0.672
gw1.15.255.1 Mycosphaerella fijiensis gw1.15.255.1 I 0.727
H072_327 Dactylellina haptotyla H072_327 I 0.697
H101_06747 Trichophyton interdigitale H101_06747 I 0.722
H102_04304 Trichophyton rubrum H102_04304 I 0.722
H105_04329 Trichophyton soudanense H105_04329 I 0.721
HCBG_05483 Histoplasma capsulatum HCBG_05483 I 0.720
HelroG70386 Helobdella robusta HelroG70386 I 0.654
HMPREF1120_04684 Exophiala dermatitidis HMPREF1120_04684 I 0.712
HMPREF1541_04667 Cyphellophora europaea HMPREF1541_04667 I 0.711
HMPREF1624_04412 Sporothrix schenckii HMPREF1624_04412 I 0.759
HPODL_00388 Ogataea parapolymorpha HPODL_00388 I 0.656
KAFR_0H03130 Kazachstania africana KAFR_0H03130 I 0.655
KAFR_0I02180 Kazachstania africana KAFR_0I02180 I 0.671
KGM_13721 Danaus plexippus KGM_13721 I 0.654
KLTH0H12144g Kluyveromyces thermotolerans KLTH0H12144g I 0.676
KLTH0H12144g Lachancea thermotolerans KLTH0H12144g I 0.676
KNAG_0I01300 Kazachstania naganishii KNAG_0I01300 I 0.673
Kpol_457p14 Vanderwaltozyma polyspora Kpol_457p14 I 0.672
Kwal_214 Kluyveromyces waltii Kwal_214 I 0.676
LALA0_S03e09428g Lachancea lanzarotensis LALA0_S03e09428g I 0.682
LELG_03203 Lodderomyces elongisporus LELG_03203 I 0.666
LEMA_P019700.1 Leptosphaeria maculans LEMA_P019700.1 I 0.731
LLOJ001292 Lutzomyia longipalpis LLOJ001292 I 0.651
M437DRAFT_81253 Aureobasidium melanogenum M437DRAFT_81253 I 0.735
M438DRAFT_393589 Aureobasidium pullulans M438DRAFT_393589 I 0.735
MAC_02434 Metarhizium acridum MAC_02434 I 0.770
MAJ_05697 Metarhizium majus MAJ_05697 I 0.768
maker-nMf.1.1.scaf03280-augustus-gene-0.7 Meloidogyne floridensis maker-nMf.1.1.scaf03280-augustus-gene-0.7 I 0.651
MAM_06665 Metarhizium album MAM_06665 I 0.770
MANI_023048 Metarhizium anisopliae MANI_023048 I 0.768
MAPG_07750 Magnaporthe poae MAPG_07750 I 0.769
MBM_03129 Marssonina brunnea MBM_03129 I 0.760
MBR_03889 Metarhizium brunneum MBR_03889 I 0.769
MCYG_06867 Microsporum canis MCYG_06867 I 0.723
MCYG_06867 Arthroderma otae MCYG_06867 I 0.723
MGG_04000 Magnaporthe oryzae MGG_04000 I 0.746
MGU_07283 Metarhizium guizhouense MGU_07283 I 0.768
MGYG_03742 Microsporum gypseum MGYG_03742 I 0.722
MhA1_Contig1476.frz3.gene5 Meloidogyne hapla MhA1_Contig1476.frz3.gene5 I 0.651
Minc08233 Meloidogyne incognita Minc08233 I 0.651
MPH_13091 Macrophomina phaseolina MPH_13091 I 0.727
MYCFIDRAFT_10959 Pseudocercospora fijiensis MYCFIDRAFT_10959 I 0.727
Mycgr3G110369 Zymoseptoria tritici Mycgr3G110369 I 0.728
MYCTH_2301302 Myceliophthora thermophila MYCTH_2301302 I 0.753
NCAS_0C04880 Naumovozyma castellii NCAS_0C04880 I 0.674
NCU06701 Neurospora crassa NCU06701 I 0.760
NDAI_0G04240 Naumovozyma dairenensis NDAI_0G04240 I 0.674
NechaG49316 Fusarium solani NechaG49316 I 0.769
NEMVEDRAFT_v1g96414 Nematostella vectensis NEMVEDRAFT_v1g96414 I 0.659
NEUTE1DRAFT_119738 Neurospora tetrasperma NEUTE1DRAFT_119738 I 0.760
OCS_02678 Ophiocordyceps sinensis OCS_02678 I 0.768
OIDMADRAFT_184073 Oidiodendron maius OIDMADRAFT_184073 I 0.739
PAAG_00480 Paracoccidioides sp lutzii PAAG_00480 I 0.721
PABG_06744 Paracoccidioides brasiliensis PABG_06744 I 0.719
PAS_chr2-2_0153 Komagataella pastoris PAS_chr2-2_0153 I 0.678
PAS_chr3_0071 Komagataella pastoris PAS_chr3_0071 N 0.652
Pc20g01690 Penicillium chrysogenum Pc20g01690 I 0.721
PCH_Pc20g01690 Penicillium rubens PCH_Pc20g01690 I 0.721
PDE_02161 Penicillium oxalicum PDE_02161 I 0.722
PDIP_47410 Penicillium digitatum PDIP_47410 I 0.721
PEX1_087840 Penicillium expansum PEX1_087840 I 0.721
PFICI_07890 Pestalotiopsis fici PFICI_07890 I 0.755
PGUG_04792 Meyerozyma guilliermondii PGUG_04792 I 0.668
PGUG_04792 Candida guilliermondii PGUG_04792 I 0.668
PHUM236330 Pediculus humanus PHUM236330 I 0.652
PICST_78645 Scheffersomyces stipitis PICST_78645 I 0.685
PITC_028740 Penicillium italicum PITC_028740 I 0.721
PMAA_084960 Talaromyces marneffei PMAA_084960 I 0.716
PMAA_084960 Penicillium marneffei PMAA_084960 I 0.716
PNEG_02893 Pneumocystis murina PNEG_02893 I 0.677
PODANS_2_5740 Podospora anserina PODANS_2_5740 I 0.707
PPAI005117 Phlebotomus papatasi PPAI005117 I 0.651
PredSwiss_ASS2010_3110.1 Pneumocystis carinii PredSwiss_ASS2010_3110.1 I 0.677
PredSwiss_CON653.4 Pneumocystis carinii PredSwiss_CON653.4 I 0.677
PTRG_01267 Pyrenophora triticirepentis PTRG_01267 I 0.725
PTT_09109 Pyrenophora teres PTT_09109 I 0.726
PV04_03763 Capronia semiimmersa PV04_03763 I 0.712
PV05_05335 Exophiala xenobiotica PV05_05335 I 0.712
PV06_00023 Exophiala oligosperma PV06_00023 I 0.712
PV07_06647 Cladophialophora immunda PV07_06647 I 0.711
PV08_04071 Exophiala spinifera PV08_04071 I 0.712
PV09_00065 Verruconis gallopava PV09_00065 I 0.722
PV10_05596 Exophiala mesophila PV10_05596 I 0.712
PV11_01295 Exophiala sideris PV11_01295 I 0.711
PVAR5_6603 Byssochlamys spectabilis PVAR5_6603 I 0.718
S40285_05794 Stachybotrys chlorohalonata S40285_05794 I 0.750
S40288_01173 Stachybotrys chartarum S40288_01173 I 0.750
SAKL0D08734g Lachancea kluyveri SAKL0D08734g I 0.673
SAPIO_CDS9685 Scedosporium apiospermum SAPIO_CDS9685 I 0.761
SBOR_6602 Sclerotinia borealis SBOR_6602 I 0.752
scaffold324-EXSNAP2012.23 Pristionchus exspectatus scaffold324-EXSNAP2012.23 I 0.656
Scas_Contig488.2 Saccharomyces castellii Scas_Contig488.2 I 0.674
SEPMUDRAFT_46603 Sphaerulina musiva SEPMUDRAFT_46603 I 0.727
SETTUDRAFT_147537 Setosphaeria turcica SETTUDRAFT_147537 I 0.729
SJAG_04839 Schizosaccharomyces japonicus SJAG_04839 I 0.675
SMAC_06634 Sordaria macrospora SMAC_06634 I 0.741
SMU15029830 Schmidtea mediterranea SMU15029830 I 0.652
SNOG_15366 Stagonospora nodorum SNOG_15366 I 0.732
SNOG_15366 Phaeosphaeria nodorum SNOG_15366 I 0.732
SOCG_01623 Schizosaccharomyces octosporus SOCG_01623 I 0.671
sak1 Schizosaccharomyces pombe SPAC3G9.14 I 0.680
SPAPADRAFT_70246 Spathaspora passalidarum SPAPADRAFT_70246 I 0.680
SPBR_05608 Sporothrix brasiliensis SPBR_05608 I 0.759
SPOG_03909 Schizosaccharomyces cryophilus SPOG_03909 I 0.670
SS1G_00575 Sclerotinia sclerotiorum SS1G_00575 I 0.751
TBLA_0C01490 Tetrapisispora blattae TBLA_0C01490 I 0.674
TDEL_0B05980 Torulaspora delbrueckii TDEL_0B05980 I 0.672
TEQG_02965 Trichophyton equinum TEQG_02965 I 0.722
TESG_00180 Trichophyton tonsurans TESG_00180 I 0.722
THITE_2107553 Thielavia terrestris THITE_2107553 I 0.747
TPHA_0B03750 Tetrapisispora phaffii TPHA_0B03750 I 0.671
TRIATDRAFT_83492 Trichoderma atroviride TRIATDRAFT_83492 I 0.770
TRIREDRAFT_69349 Trichoderma reesei TRIREDRAFT_69349 I 0.767
TRIVIDRAFT_34449 Trichoderma virens TRIVIDRAFT_34449 I 0.767
TRV_04907 Trichophyton verrucosum TRV_04907 I 0.722
TSTA_119980 Talaromyces stipitatus TSTA_119980 I 0.716
U727_0043066021 Penicillium solitum U727_0043066021 I 0.721
UCRPA7_1505 Togninia minima UCRPA7_1505 I 0.768
UREG_04378 Uncinocarpus reesii UREG_04378 I 0.722
UV8b_7132 Ustilaginoidea virens UV8b_7132 I 0.727
V499_05779 Pseudogymnoascus pannorum V499_05779 I 0.759
VDAG_01397 Verticillium dahliae VDAG_01397 I 0.771
VDBG_04171 Verticillium albo atrum VDBG_04171 I 0.771
VDBG_04171 Verticillium alfalfae VDBG_04171 I 0.771
VHEMI10038 Torrubiella hemipterigena VHEMI10038 I 0.770
W97_05844 Coniosporium apollinis W97_05844 I 0.730
daf-19 Caenorhabditis elegans WBGene00000914 D 0.656
X797_002751 Metarhizium robertsii X797_002751 I 0.768
XP_002492053.1 Pichia pastoris XP_002492053.1 I 0.678
XP_002492279.1 Pichia pastoris XP_002492279.1 N 0.652
YALI0_E13596g Yarrowia lipolytica YALI0_E13596g I 0.693
RFX1 Saccharomyces cerevisiae YLR176C D 0.671
Z517_10332 Fonsecaea pedrosoi Z517_10332 I 0.712
Z518_01660 Rhinocladiella mackenziei Z518_01660 I 0.712
Z519_02210 Cladophialophora bantiana Z519_02210 N 0.670
ZBAI_03427 Zygosaccharomyces bailii ZBAI_03427 I 0.672
ZBAI_08430 Zygosaccharomyces bailii ZBAI_08430 I 0.672
ZYRO0E04642g Zygosaccharomyces rouxii ZYRO0E04642g I 0.673