GLRG_03233 (Colletotrichum graminicola)
RFX

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02257 (RFX_DNA_binding) IPR003150 GLRG_03233 T318624_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RFX1
M00066_2.00
Saccharomyces cerevisiae
NSGTTGCYAN

NTRGCAACSN
PBM
Badis et al.(2008)
RFX1_4537
0.672 0.506
RFX1
M07494_2.00
Saccharomyces cerevisiae
BGTTRCYA

TRGYAACV
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0365.1
0.672 0.506
RFX1
M08600_2.00
Saccharomyces cerevisiae
CGTYRBYAYRGYWACM

KGTWRCYRTRVYRACG
Misc
DeBoer et al.(2011)
YLR176C_1478
0.672 0.506
RFX1
M08601_2.00
Saccharomyces cerevisiae
BGTTRCYA

TRGYAACV
Misc
DeBoer et al.(2011)
YLR176C_496
0.672 0.506
RFX1
M11251_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$RFX1_02
0.672 0.506
daf-19
M00709_2.00
Caenorhabditis elegans
SGTTRCTADG

CHTAGYAACS
PBM
Narasimhan et al.(2015)
pTH10021
0.657 0.455
RFX2
M02449_2.00
Homo sapiens
BGTHRYYADG

CHTRRYDACV
PBM
Weirauch et al.(2014)
pTH9194
0.651 0.403
RFX2
M02450_2.00
Ornithorhynchus anatinus
NGTHRYYANV

BNTRRYDACN
PBM
Weirauch et al.(2014)
pTH9269
0.651 0.403
For this family, TFs with SR scores > 0.650 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFQ28089 RFX 170 246

Links

Other RFX family TFs
Other Colletotrichum graminicola TFs

249 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
CFIO01_07583 Colletotrichum fioriniae CFIO01_07583 I 0.775
CH063_09103 Colletotrichum higginsianum CH063_09103 I 0.775
VDBG_04171 Verticillium albo atrum VDBG_04171 I 0.774
VDAG_01397 Verticillium dahliae VDAG_01397 I 0.774
CSUB01_01029 Colletotrichum sublineola CSUB01_01029 I 0.774
VDBG_04171 Verticillium alfalfae VDBG_04171 I 0.774
CGGC5_15149 Colletotrichum gloeosporioides CGGC5_15149 I 0.773
MAM_06665 Metarhizium album MAM_06665 I 0.773
VHEMI10038 Torrubiella hemipterigena VHEMI10038 I 0.773
TRIATDRAFT_83492 Trichoderma atroviride TRIATDRAFT_83492 I 0.773
MAC_02434 Metarhizium acridum MAC_02434 I 0.773
CPUR_03868 Claviceps purpurea CPUR_03868 I 0.772
MBR_03889 Metarhizium brunneum MBR_03889 I 0.772
OCS_02678 Ophiocordyceps sinensis OCS_02678 I 0.771
UCRPA7_1505 Togninia minima UCRPA7_1505 I 0.771
TRIVIDRAFT_34449 Trichoderma virens TRIVIDRAFT_34449 I 0.771
TRIREDRAFT_69349 Trichoderma reesei TRIREDRAFT_69349 I 0.771
X797_002751 Metarhizium robertsii X797_002751 I 0.771
MGU_07283 Metarhizium guizhouense MGU_07283 I 0.771
MANI_023048 Metarhizium anisopliae MANI_023048 I 0.771
MAJ_05697 Metarhizium majus MAJ_05697 I 0.771
Cob_11986 Colletotrichum orbiculare Cob_11986 I 0.770
NechaG49316 Fusarium solani NechaG49316 I 0.770
e_gw1.6.922.1 Nectria haematococca e_gw1.6.922.1 I 0.770
CMQ_5960 Grosmannia clavigera CMQ_5960 I 0.769
CCM_03895 Cordyceps militaris CCM_03895 I 0.768
F503_07504 Ophiostoma piceae uamh F503_07504 I 0.768
estExt_fgenesh2_pg.C_10713 Neurospora discreta estExt_fgenesh2_pg.C_10713 I 0.767
BBA_07182 Beauveria bassiana BBA_07182 I 0.766
MAPG_07750 Magnaporthe poae MAPG_07750 I 0.765
GGTG_07952 Gaeumannomyces graminis GGTG_07952 I 0.765
EV44_g5273 Erysiphe necator EV44_g5273 I 0.763
NEUTE1DRAFT_119738 Neurospora tetrasperma NEUTE1DRAFT_119738 I 0.763
NCU06701 Neurospora crassa NCU06701 I 0.763
HMPREF1624_04412 Sporothrix schenckii HMPREF1624_04412 I 0.762
SAPIO_CDS9685 Scedosporium apiospermum SAPIO_CDS9685 I 0.762
SPBR_05608 Sporothrix brasiliensis SPBR_05608 I 0.762
MBM_03129 Marssonina brunnea MBM_03129 I 0.761
V499_05779 Pseudogymnoascus pannorum V499_05779 I 0.760
GMDG_00789 Pseudogymnoascus destructans GMDG_00789 I 0.760
CTHT_0028340 Chaetomium thermophilum CTHT_0028340 I 0.758
PFICI_07890 Pestalotiopsis fici PFICI_07890 I 0.758
FOXG_01471 Fusarium oxysporum FOXG_01471 I 0.757
FVEG_07837 Fusarium verticillioides FVEG_07837 I 0.757
FGRRES_07420 Fusarium graminearum FGRRES_07420 I 0.757
FFUJ_02499 Fusarium fujikuroi FFUJ_02499 I 0.757
MYCTH_2301302 Myceliophthora thermophila MYCTH_2301302 I 0.756
Bcin03g02360 Botrytis cinerea Bcin03g02360 I 0.756
SBOR_6602 Sclerotinia borealis SBOR_6602 I 0.754
S40288_01173 Stachybotrys chartarum S40288_01173 I 0.753
S40285_05794 Stachybotrys chlorohalonata S40285_05794 I 0.753
SS1G_00575 Sclerotinia sclerotiorum SS1G_00575 I 0.752
THITE_2107553 Thielavia terrestris THITE_2107553 I 0.750
MGG_04000 Magnaporthe oryzae MGG_04000 I 0.749
BGHDH14_bgh05888 Blumeria graminis BGHDH14_bgh05888 I 0.745
SMAC_06634 Sordaria macrospora SMAC_06634 I 0.744
OIDMADRAFT_184073 Oidiodendron maius OIDMADRAFT_184073 I 0.741
FPSE_09383 Fusarium pseudograminearum FPSE_09383 I 0.741
fgenesh1_pg.C_scaffold_1001176 Cryphonectria parasitica fgenesh1_pg.C_scaffold_1001176 I 0.739
M437DRAFT_81253 Aureobasidium melanogenum M437DRAFT_81253 I 0.736
AUEXF2481DRAFT_78728 Aureobasidium subglaciale AUEXF2481DRAFT_78728 I 0.736
M438DRAFT_393589 Aureobasidium pullulans M438DRAFT_393589 I 0.736
SNOG_15366 Phaeosphaeria nodorum SNOG_15366 I 0.732
SNOG_15366 Stagonospora nodorum SNOG_15366 I 0.732
LEMA_P019700.1 Leptosphaeria maculans LEMA_P019700.1 I 0.731
W97_05844 Coniosporium apollinis W97_05844 I 0.730
COCCADRAFT_29061 Bipolaris zeicola COCCADRAFT_29061 I 0.729
Mycgr3G110369 Zymoseptoria tritici Mycgr3G110369 I 0.729
SETTUDRAFT_147537 Setosphaeria turcica SETTUDRAFT_147537 I 0.729
COCC4DRAFT_162970 Bipolaris maydis COCC4DRAFT_162970 I 0.729
COCMIDRAFT_23254 Bipolaris oryzae COCMIDRAFT_23254 I 0.729
COCSADRAFT_34318 Bipolaris sorokiniana COCSADRAFT_34318 I 0.729
estExt_fgenesh1_pg.C_chr_80140 Mycosphaerella graminicola estExt_fgenesh1_pg.C_chr_80140 I 0.729
COCVIDRAFT_40879 Bipolaris victoriae COCVIDRAFT_40879 I 0.729
SEPMUDRAFT_46603 Sphaerulina musiva SEPMUDRAFT_46603 I 0.728
MPH_13091 Macrophomina phaseolina MPH_13091 I 0.728
gw1.15.255.1 Mycosphaerella fijiensis gw1.15.255.1 I 0.728
AB07822.1 Alternaria brassicicola AB07822.1 I 0.728
MYCFIDRAFT_10959 Pseudocercospora fijiensis MYCFIDRAFT_10959 I 0.728
DOTSEDRAFT_132769 Dothistroma septosporum DOTSEDRAFT_132769 I 0.727
BAUCODRAFT_23427 Baudoinia compniacensis BAUCODRAFT_23427 I 0.726
PTT_09109 Pyrenophora teres PTT_09109 I 0.726
PTRG_01267 Pyrenophora triticirepentis PTRG_01267 I 0.725
MCYG_06867 Microsporum canis MCYG_06867 I 0.724
ARB_07111 Arthroderma benhamiae ARB_07111 I 0.724
H102_04304 Trichophyton rubrum H102_04304 I 0.724
MCYG_06867 Arthroderma otae MCYG_06867 I 0.724
MGYG_03742 Microsporum gypseum MGYG_03742 I 0.724
TEQG_02965 Trichophyton equinum TEQG_02965 I 0.724
H101_06747 Trichophyton interdigitale H101_06747 I 0.724
TRV_04907 Trichophyton verrucosum TRV_04907 I 0.724
TESG_00180 Trichophyton tonsurans TESG_00180 I 0.724
PV09_00065 Verruconis gallopava PV09_00065 I 0.723
ANIA_02296 Aspergillus nidulans CADANIAG00008989 I 0.722
CADANGAG00013568 Aspergillus niger CADANGAG00013568 I 0.722
ATEG_09416 Aspergillus terreus CADATEAG00008983 I 0.722
NFIA_036980 Neosartorya fischeri CADNFIAG00003299 I 0.722
PAAG_00480 Paracoccidioides sp lutzii PAAG_00480 I 0.722
PDE_02161 Penicillium oxalicum PDE_02161 I 0.722
AFUA_5G06120 Aspergillus fumigatus CADAFUAG00006202 I 0.722
CADAFLAG00010851 Aspergillus flavus CADAFLAG00010851 I 0.722
CIMG_05985 Coccidioides immitis CIMG_05985 I 0.722
fgenesh1_pg.00162_#_176 Aspergillus carbonarius fgenesh1_pg.00162_#_176 I 0.722
UV8b_7132 Ustilaginoidea virens UV8b_7132 I 0.722
UREG_04378 Uncinocarpus reesii UREG_04378 I 0.722
ACLA_009440 Aspergillus clavatus CADACLAG00001004 I 0.722
EURHEDRAFT_516724 Aspergillus ruber EURHEDRAFT_516724 I 0.722
CPC735_025690 Coccidioides posadasii CPC735_025690 I 0.722
CADAORAG00004061 Aspergillus oryzae CADAORAG00004061 I 0.722
H105_04329 Trichophyton soudanense H105_04329 I 0.722
PCH_Pc20g01690 Penicillium rubens PCH_Pc20g01690 I 0.721
U727_0043066021 Penicillium solitum U727_0043066021 I 0.721
HCBG_05483 Histoplasma capsulatum HCBG_05483 I 0.721
PEX1_087840 Penicillium expansum PEX1_087840 I 0.721
PDIP_47410 Penicillium digitatum PDIP_47410 I 0.721
Pc20g01690 Penicillium chrysogenum Pc20g01690 I 0.721
PITC_028740 Penicillium italicum PITC_028740 I 0.721
PABG_06744 Paracoccidioides brasiliensis PABG_06744 I 0.720
BDDG_02784 Blastomyces dermatitidis BDDG_02784 I 0.718
PVAR5_6603 Byssochlamys spectabilis PVAR5_6603 I 0.718
ACRE_029400 Acremonium chrysogenum ACRE_029400 I 0.717
PMAA_084960 Penicillium marneffei PMAA_084960 I 0.716
TSTA_119980 Talaromyces stipitatus TSTA_119980 I 0.716
PMAA_084960 Talaromyces marneffei PMAA_084960 I 0.716
HMPREF1120_04684 Exophiala dermatitidis HMPREF1120_04684 I 0.713
PV08_04071 Exophiala spinifera PV08_04071 I 0.713
A1O3_08026 Capronia epimyces A1O3_08026 I 0.713
PV10_05596 Exophiala mesophila PV10_05596 I 0.713
PV06_00023 Exophiala oligosperma PV06_00023 I 0.713
PV05_05335 Exophiala xenobiotica PV05_05335 I 0.713
PV04_03763 Capronia semiimmersa PV04_03763 I 0.713
A1O1_08600 Capronia coronata A1O1_08600 I 0.713
G647_04815 Cladophialophora carrionii G647_04815 I 0.713
Z517_10332 Fonsecaea pedrosoi Z517_10332 I 0.713
A1O5_04383 Cladophialophora psammophila A1O5_04383 I 0.713
Z518_01660 Rhinocladiella mackenziei Z518_01660 I 0.713
PV07_06647 Cladophialophora immunda PV07_06647 I 0.712
A1O9_03272 Exophiala aquamarina A1O9_03272 I 0.712
A1O7_03561 Cladophialophora yegresii A1O7_03561 I 0.712
EPUS_04947 Endocarpon pusillum EPUS_04947 I 0.712
PV11_01295 Exophiala sideris PV11_01295 I 0.712
HMPREF1541_04667 Cyphellophora europaea HMPREF1541_04667 I 0.709
PODANS_2_5740 Podospora anserina PODANS_2_5740 I 0.706
DRE_06212 Drechslerella stenobrocha DRE_06212 I 0.698
AOL_s00215g602 Arthrobotrys oligospora AOL_s00215g602 I 0.698
H072_327 Dactylellina haptotyla H072_327 I 0.698
YALI0_E13596g Yarrowia lipolytica YALI0_E13596g I 0.694
DEHA2G10868g Debaryomyces hansenii DEHA2G10868g I 0.687
PICST_78645 Scheffersomyces stipitis PICST_78645 I 0.686
GNLVRS01_PISO0F09355g Millerozyma farinosa GNLVRS01_PISO0F09355g I 0.685
GNLVRS01_PISO0E08012g Millerozyma farinosa GNLVRS01_PISO0E08012g I 0.685
sak1 Schizosaccharomyces pombe SPAC3G9.14 I 0.681
estExt_genewise1_worm.C_chr_6.10133 Pichia stipitis estExt_genewise1_worm.C_chr_6.10133 I 0.681
BN7_2967 Wickerhamomyces ciferrii BN7_2967 I 0.681
SPAPADRAFT_70246 Spathaspora passalidarum SPAPADRAFT_70246 I 0.681
LALA0_S03e09428g Lachancea lanzarotensis LALA0_S03e09428g I 0.680
PAS_chr2-2_0153 Komagataella pastoris PAS_chr2-2_0153 I 0.679
XP_002492053.1 Pichia pastoris XP_002492053.1 I 0.679
PredSwiss_CON653.4 Pneumocystis carinii PredSwiss_CON653.4 I 0.678
PredSwiss_ASS2010_3110.1 Pneumocystis carinii PredSwiss_ASS2010_3110.1 I 0.678
PNEG_02893 Pneumocystis murina PNEG_02893 I 0.678
CLUG_05348 Candida lusitaniae CLUG_05348 I 0.677
CLUG_05348 Clavispora lusitaniae CLUG_05348 I 0.677
SJAG_04839 Schizosaccharomyces japonicus SJAG_04839 I 0.676
NCAS_0C04880 Naumovozyma castellii NCAS_0C04880 I 0.675
NDAI_0G04240 Naumovozyma dairenensis NDAI_0G04240 I 0.675
Scas_Contig488.2 Saccharomyces castellii Scas_Contig488.2 I 0.675
GSTUM_00005211001 Tuber melanosporum GSTUM_00005211001 I 0.675
ZBAI_03427 Zygosaccharomyces bailii ZBAI_03427 I 0.674
KLTH0H12144g Kluyveromyces thermotolerans KLTH0H12144g I 0.674
Kwal_214 Kluyveromyces waltii Kwal_214 I 0.674
KLTH0H12144g Lachancea thermotolerans KLTH0H12144g I 0.674
ZBAI_08430 Zygosaccharomyces bailii ZBAI_08430 I 0.674
CaO19.3865 Candida albicans CaO19.3865 I 0.674
CaO19.11346 Candida albicans CaO19.11346 I 0.674
TBLA_0C01490 Tetrapisispora blattae TBLA_0C01490 I 0.674
ZYRO0E04642g Zygosaccharomyces rouxii ZYRO0E04642g I 0.674
CD36_31600 Candida dubliniensis CD36_31600 I 0.674
KNAG_0I01300 Kazachstania naganishii KNAG_0I01300 I 0.674
AGOS_AAL010W Ashbya gossypii AGOS_AAL010W I 0.673
AACERI_AaceriAAL010W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAAL010W I 0.673
CORT_0D05100 Candida orthopsilosis CORT_0D05100 I 0.672
CAOG_00356 Capsaspora owczarzaki CAOG_00356 I 0.672
16177_Multiple Saccharomyces paradoxus 16177_Multiple I 0.672
14959_Multiple Saccharomyces mikatae 14959_Multiple I 0.672
RFX1 Saccharomyces cerevisiae YLR176C D 0.672
CPAG_04140 Candida parapsilosis CPAG_04140 I 0.672
SOCG_01623 Schizosaccharomyces octosporus SOCG_01623 I 0.672
KAFR_0I02180 Kazachstania africana KAFR_0I02180 I 0.672
CAGL0B04895g Candida glabrata CAGL0B04895g I 0.672
SPOG_03909 Schizosaccharomyces cryophilus SPOG_03909 I 0.671
SAKL0D08734g Lachancea kluyveri SAKL0D08734g I 0.671
Z519_02210 Cladophialophora bantiana Z519_02210 N 0.670
TDEL_0B05980 Torulaspora delbrueckii TDEL_0B05980 I 0.670
PGUG_04792 Candida guilliermondii PGUG_04792 I 0.669
TPHA_0B03750 Tetrapisispora phaffii TPHA_0B03750 I 0.669
PGUG_04792 Meyerozyma guilliermondii PGUG_04792 I 0.669
Kpol_457p14 Vanderwaltozyma polyspora Kpol_457p14 I 0.668
LELG_03203 Lodderomyces elongisporus LELG_03203 I 0.667
CTRG_00624 Candida tropicalis CTRG_00624 I 0.666
G210_0560 Candida maltosa G210_0560 I 0.665
ACYPI002124 Acyrthosiphon pisum ACYPI002124 I 0.664
NEMVEDRAFT_v1g96414 Nematostella vectensis NEMVEDRAFT_v1g96414 I 0.660
CAGL0H03751g Candida glabrata CAGL0H03751g I 0.658
daf-19 Caenorhabditis elegans WBGene00000914 D 0.657
scaffold324-EXSNAP2012.23 Pristionchus exspectatus scaffold324-EXSNAP2012.23 I 0.657
HPODL_00388 Ogataea parapolymorpha HPODL_00388 I 0.657
KAFR_0H03130 Kazachstania africana KAFR_0H03130 I 0.656
Aan_R008768 Calypte anna Aan_R008768 I 0.656
KGM_13721 Danaus plexippus KGM_13721 I 0.655
HelroG70386 Helobdella robusta HelroG70386 I 0.655
PHUM236330 Pediculus humanus PHUM236330 I 0.653
estExt_fgenesh2_pg.C_4710022 Branchiostoma floridae estExt_fgenesh2_pg.C_4710022 I 0.653
SMU15029830 Schmidtea mediterranea SMU15029830 I 0.653
XP_002492279.1 Pichia pastoris XP_002492279.1 N 0.652
Minc08233 Meloidogyne incognita Minc08233 I 0.652
Aqu1.223787 Amphimedon queenslandica Aqu1.223787 I 0.652
PAS_chr3_0071 Komagataella pastoris PAS_chr3_0071 N 0.652
Cmyd_10003770 Chelonia mydas Cmyd_10003770 I 0.652
PPAI005117 Phlebotomus papatasi PPAI005117 I 0.652
LLOJ001292 Lutzomyia longipalpis LLOJ001292 I 0.652
AMAG_10999 Allomyces macrogynus AMAG_10999 I 0.652
DILT_0000443401 Diphyllobothrium latum DILT_0000443401 I 0.652
AMAG_11601 Allomyces macrogynus AMAG_11601 I 0.652
MhA1_Contig1476.frz3.gene5 Meloidogyne hapla MhA1_Contig1476.frz3.gene5 I 0.652
maker-nMf.1.1.scaf03280-augustus-gene-0.7 Meloidogyne floridensis maker-nMf.1.1.scaf03280-augustus-gene-0.7 I 0.652
RFX2 Macaca mulatta ENSMMUG00000011967 I 0.651
snap_masked-nMf.1.1.scaf12121-processed-gene-0.2 Meloidogyne floridensis snap_masked-nMf.1.1.scaf12121-processed-gene-0.2 I 0.651
ENSMPUG00000006329 Mustela putorius furo ENSMPUG00000006329 I 0.651
AALB009562 Anopheles albimanus AALB009562 I 0.651
BGIBMGA012712 Bombyx mori BGIBMGA012712 I 0.651
Rfx2 Mus musculus ENSMUSG00000024206 D 0.651
RFX2 Ornithorhynchus anatinus ENSOANG00000003796 D 0.651
CapteG168129 Capitella teleta CapteG168129 I 0.651
DI09_91p30 Microsporidia sp DI09_91p30 I 0.651
ADAC010162 Anopheles darlingi ADAC010162 I 0.651
Myotis_brandtii_Rfx2_10010595 Myotis brandtii Myotis_brandtii_Rfx2_10010595 I 0.651
ENSPPYG00000009445 Pongo abelii ENSPPYG00000009445 I 0.651
RFX2 Homo sapiens ENSG00000087903 D 0.651
DI09_1p30 Microsporidia sp DI09_1p30 I 0.651
L798_03671 Zootermopsis nevadensis L798_03671 I 0.651
Rfx2 Rattus norvegicus ENSRNOG00000045846 I 0.651
HMEL015479 Heliconius melpomene HMEL015479 I 0.650
CPIJ004011 Culex quinquefasciatus CPIJ004011 I 0.650
Brh_R000260 Buceros rhinoceros Brh_R000260 I 0.650
AAEL018287 Aedes aegypti AAEL018287 I 0.650
ENSPSIG00000005029 Pelodiscus sinensis ENSPSIG00000005029 I 0.650
LCUP002873 Lucilia cuprina LCUP002873 I 0.650
CpipJ_CPIJ004011 Culex pipiens CpipJ_CPIJ004011 I 0.650