CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Kpol_457p14
(
Vanderwaltozyma polyspora
)
RFX
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02257 (RFX_DNA_binding)
IPR003150
Kpol_457p14
T318660_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RFX1
M00066_2.00
Saccharomyces cerevisiae
NSGTTGCYAN
NTRGCAACSN
PBM
Badis et al.(2008)
RFX1_4537
0.720
0.709
RFX1
M07494_2.00
Saccharomyces cerevisiae
BGTTRCYA
TRGYAACV
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0365.1
0.720
0.709
RFX1
M08600_2.00
Saccharomyces cerevisiae
CGTYRBYAYRGYWACM
KGTWRCYRTRVYRACG
Misc
DeBoer et al.(2011)
YLR176C_1478
0.720
0.709
RFX1
M08601_2.00
Saccharomyces cerevisiae
BGTTRCYA
TRGYAACV
Misc
DeBoer et al.(2011)
YLR176C_496
0.720
0.709
RFX1
M11251_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$RFX1_02
0.720
0.709
For this family, TFs with SR scores >
0.650
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EDO15363
RFX
276
354
QVYAFIWLMQNCTADSNSYVPRGRIFSQYATSCAKNSLKPLSQASLGKFIRSLFPNLKTRRLGMRGKSKYHYCGLKLVS
Links
Other
RFX
family TFs
Other
Vanderwaltozyma polyspora
TFs
208 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TPHA_0B03750
Tetrapisispora phaffii
TPHA_0B03750
I
0.745
SAKL0D08734g
Lachancea kluyveri
SAKL0D08734g
I
0.739
TBLA_0C01490
Tetrapisispora blattae
TBLA_0C01490
I
0.738
AGOS_AAL010W
Ashbya gossypii
AGOS_AAL010W
I
0.734
AACERI_AaceriAAL010W
Saccharomycetaceae sp ashbya aceri
AACERI_AaceriAAL010W
I
0.734
TDEL_0B05980
Torulaspora delbrueckii
TDEL_0B05980
I
0.733
ZYRO0E04642g
Zygosaccharomyces rouxii
ZYRO0E04642g
I
0.725
ZBAI_03427
Zygosaccharomyces bailii
ZBAI_03427
I
0.724
ZBAI_08430
Zygosaccharomyces bailii
ZBAI_08430
I
0.724
KAFR_0I02180
Kazachstania africana
KAFR_0I02180
I
0.723
NDAI_0G04240
Naumovozyma dairenensis
NDAI_0G04240
I
0.721
16177_Multiple
Saccharomyces paradoxus
16177_Multiple
I
0.720
RFX1
Saccharomyces cerevisiae
YLR176C
D
0.720
Scas_Contig488.2
Saccharomyces castellii
Scas_Contig488.2
I
0.720
KAFR_0H03130
Kazachstania africana
KAFR_0H03130
I
0.720
NCAS_0C04880
Naumovozyma castellii
NCAS_0C04880
I
0.720
14959_Multiple
Saccharomyces mikatae
14959_Multiple
I
0.720
KNAG_0I01300
Kazachstania naganishii
KNAG_0I01300
I
0.717
CAGL0H03751g
Candida glabrata
CAGL0H03751g
I
0.715
KLTH0H12144g
Kluyveromyces thermotolerans
KLTH0H12144g
I
0.714
Kwal_214
Kluyveromyces waltii
Kwal_214
I
0.714
KLTH0H12144g
Lachancea thermotolerans
KLTH0H12144g
I
0.714
CAGL0B04895g
Candida glabrata
CAGL0B04895g
I
0.712
LALA0_S03e09428g
Lachancea lanzarotensis
LALA0_S03e09428g
I
0.712
BN7_2967
Wickerhamomyces ciferrii
BN7_2967
I
0.695
DEHA2G10868g
Debaryomyces hansenii
DEHA2G10868g
I
0.694
GNLVRS01_PISO0E08012g
Millerozyma farinosa
GNLVRS01_PISO0E08012g
I
0.693
GNLVRS01_PISO0F09355g
Millerozyma farinosa
GNLVRS01_PISO0F09355g
I
0.693
PICST_78645
Scheffersomyces stipitis
PICST_78645
I
0.685
SJAG_04839
Schizosaccharomyces japonicus
SJAG_04839
I
0.683
estExt_genewise1_worm.C_chr_6.10133
Pichia stipitis
estExt_genewise1_worm.C_chr_6.10133
I
0.680
SPAPADRAFT_70246
Spathaspora passalidarum
SPAPADRAFT_70246
I
0.680
PredSwiss_CON653.4
Pneumocystis carinii
PredSwiss_CON653.4
I
0.679
PredSwiss_ASS2010_3110.1
Pneumocystis carinii
PredSwiss_ASS2010_3110.1
I
0.679
PNEG_02893
Pneumocystis murina
PNEG_02893
I
0.679
PV08_04071
Exophiala spinifera
PV08_04071
I
0.676
PV05_05335
Exophiala xenobiotica
PV05_05335
I
0.676
PV06_00023
Exophiala oligosperma
PV06_00023
I
0.676
HMPREF1120_04684
Exophiala dermatitidis
HMPREF1120_04684
I
0.676
Z517_10332
Fonsecaea pedrosoi
Z517_10332
I
0.676
PV10_05596
Exophiala mesophila
PV10_05596
I
0.676
YALI0_E13596g
Yarrowia lipolytica
YALI0_E13596g
I
0.676
A1O1_08600
Capronia coronata
A1O1_08600
I
0.676
A1O5_04383
Cladophialophora psammophila
A1O5_04383
I
0.676
SOCG_01623
Schizosaccharomyces octosporus
SOCG_01623
I
0.675
PV07_06647
Cladophialophora immunda
PV07_06647
I
0.675
PV11_01295
Exophiala sideris
PV11_01295
I
0.675
SPOG_03909
Schizosaccharomyces cryophilus
SPOG_03909
I
0.674
A1O9_03272
Exophiala aquamarina
A1O9_03272
I
0.674
EPUS_04947
Endocarpon pusillum
EPUS_04947
I
0.673
GGTG_07952
Gaeumannomyces graminis
GGTG_07952
I
0.673
A1O3_08026
Capronia epimyces
A1O3_08026
I
0.673
HMPREF1541_04667
Cyphellophora europaea
HMPREF1541_04667
I
0.673
MAPG_07750
Magnaporthe poae
MAPG_07750
I
0.673
estExt_fgenesh2_pg.C_10713
Neurospora discreta
estExt_fgenesh2_pg.C_10713
I
0.673
PV04_03763
Capronia semiimmersa
PV04_03763
I
0.673
Z518_01660
Rhinocladiella mackenziei
Z518_01660
I
0.673
CD36_31600
Candida dubliniensis
CD36_31600
I
0.673
G647_04815
Cladophialophora carrionii
G647_04815
I
0.672
CFIO01_07583
Colletotrichum fioriniae
CFIO01_07583
I
0.672
Cob_11986
Colletotrichum orbiculare
Cob_11986
I
0.672
A1O7_03561
Cladophialophora yegresii
A1O7_03561
I
0.672
CH063_09103
Colletotrichum higginsianum
CH063_09103
I
0.672
BBA_07182
Beauveria bassiana
BBA_07182
I
0.672
THITE_2107553
Thielavia terrestris
THITE_2107553
I
0.671
PAS_chr2-2_0153
Komagataella pastoris
PAS_chr2-2_0153
I
0.671
CPAG_04140
Candida parapsilosis
CPAG_04140
I
0.671
CaO19.11346
Candida albicans
CaO19.11346
I
0.671
CORT_0D05100
Candida orthopsilosis
CORT_0D05100
I
0.671
XP_002492053.1
Pichia pastoris
XP_002492053.1
I
0.671
CaO19.3865
Candida albicans
CaO19.3865
I
0.671
CSUB01_01029
Colletotrichum sublineola
CSUB01_01029
I
0.671
sak1
Schizosaccharomyces pombe
SPAC3G9.14
I
0.671
MCYG_06867
Arthroderma otae
MCYG_06867
I
0.670
PDIP_47410
Penicillium digitatum
PDIP_47410
I
0.670
PCH_Pc20g01690
Penicillium rubens
PCH_Pc20g01690
I
0.670
CTHT_0028340
Chaetomium thermophilum
CTHT_0028340
I
0.670
PVAR5_6603
Byssochlamys spectabilis
PVAR5_6603
I
0.670
CCM_03895
Cordyceps militaris
CCM_03895
I
0.670
Pc20g01690
Penicillium chrysogenum
Pc20g01690
I
0.670
PEX1_087840
Penicillium expansum
PEX1_087840
I
0.670
MCYG_06867
Microsporum canis
MCYG_06867
I
0.670
PITC_028740
Penicillium italicum
PITC_028740
I
0.670
BDDG_02784
Blastomyces dermatitidis
BDDG_02784
I
0.670
U727_0043066021
Penicillium solitum
U727_0043066021
I
0.670
MAC_02434
Metarhizium acridum
MAC_02434
I
0.669
TRV_04907
Trichophyton verrucosum
TRV_04907
I
0.669
PMAA_084960
Talaromyces marneffei
PMAA_084960
I
0.669
PFICI_07890
Pestalotiopsis fici
PFICI_07890
I
0.669
PMAA_084960
Penicillium marneffei
PMAA_084960
I
0.669
TSTA_119980
Talaromyces stipitatus
TSTA_119980
I
0.669
MGYG_03742
Microsporum gypseum
MGYG_03742
I
0.669
UREG_04378
Uncinocarpus reesii
UREG_04378
I
0.669
VDBG_04171
Verticillium albo atrum
VDBG_04171
I
0.669
VDAG_01397
Verticillium dahliae
VDAG_01397
I
0.669
MAM_06665
Metarhizium album
MAM_06665
I
0.669
H105_04329
Trichophyton soudanense
H105_04329
I
0.669
F503_07504
Ophiostoma piceae uamh
F503_07504
I
0.669
EURHEDRAFT_516724
Aspergillus ruber
EURHEDRAFT_516724
I
0.669
CADAORAG00004061
Aspergillus oryzae
CADAORAG00004061
I
0.669
TEQG_02965
Trichophyton equinum
TEQG_02965
I
0.669
TESG_00180
Trichophyton tonsurans
TESG_00180
I
0.669
ATEG_09416
Aspergillus terreus
CADATEAG00008983
I
0.669
NFIA_036980
Neosartorya fischeri
CADNFIAG00003299
I
0.669
CIMG_05985
Coccidioides immitis
CIMG_05985
I
0.669
CGGC5_15149
Colletotrichum gloeosporioides
CGGC5_15149
I
0.669
CPC735_025690
Coccidioides posadasii
CPC735_025690
I
0.669
SPBR_05608
Sporothrix brasiliensis
SPBR_05608
I
0.669
CADANGAG00013568
Aspergillus niger
CADANGAG00013568
I
0.669
AFUA_5G06120
Aspergillus fumigatus
CADAFUAG00006202
I
0.669
HMPREF1624_04412
Sporothrix schenckii
HMPREF1624_04412
I
0.669
HPODL_00388
Ogataea parapolymorpha
HPODL_00388
I
0.669
VHEMI10038
Torrubiella hemipterigena
VHEMI10038
I
0.669
ARB_07111
Arthroderma benhamiae
ARB_07111
I
0.669
fgenesh1_pg.00162_#_176
Aspergillus carbonarius
fgenesh1_pg.00162_#_176
I
0.669
TRIATDRAFT_83492
Trichoderma atroviride
TRIATDRAFT_83492
I
0.669
ACLA_009440
Aspergillus clavatus
CADACLAG00001004
I
0.669
CADAFLAG00010851
Aspergillus flavus
CADAFLAG00010851
I
0.669
H101_06747
Trichophyton interdigitale
H101_06747
I
0.669
H102_04304
Trichophyton rubrum
H102_04304
I
0.669
VDBG_04171
Verticillium alfalfae
VDBG_04171
I
0.669
SAPIO_CDS9685
Scedosporium apiospermum
SAPIO_CDS9685
I
0.668
MAJ_05697
Metarhizium majus
MAJ_05697
I
0.668
X797_002751
Metarhizium robertsii
X797_002751
I
0.668
PDE_02161
Penicillium oxalicum
PDE_02161
I
0.668
MANI_023048
Metarhizium anisopliae
MANI_023048
I
0.668
MBR_03889
Metarhizium brunneum
MBR_03889
I
0.668
GLRG_03233
Colletotrichum graminicola
GLRG_03233
I
0.668
ANIA_02296
Aspergillus nidulans
CADANIAG00008989
I
0.668
NCU06701
Neurospora crassa
NCU06701
I
0.668
CPUR_03868
Claviceps purpurea
CPUR_03868
I
0.668
CTRG_00624
Candida tropicalis
CTRG_00624
I
0.668
FGRRES_07420
Fusarium graminearum
FGRRES_07420
I
0.668
MGU_07283
Metarhizium guizhouense
MGU_07283
I
0.668
LELG_03203
Lodderomyces elongisporus
LELG_03203
I
0.668
ACRE_029400
Acremonium chrysogenum
ACRE_029400
I
0.668
NEUTE1DRAFT_119738
Neurospora tetrasperma
NEUTE1DRAFT_119738
I
0.668
MPH_13091
Macrophomina phaseolina
MPH_13091
I
0.668
e_gw1.6.922.1
Nectria haematococca
e_gw1.6.922.1
I
0.667
NechaG49316
Fusarium solani
NechaG49316
I
0.667
EV44_g5273
Erysiphe necator
EV44_g5273
I
0.667
PAAG_00480
Paracoccidioides sp lutzii
PAAG_00480
I
0.667
CMQ_5960
Grosmannia clavigera
CMQ_5960
I
0.667
PABG_06744
Paracoccidioides brasiliensis
PABG_06744
I
0.667
MGG_04000
Magnaporthe oryzae
MGG_04000
I
0.667
OCS_02678
Ophiocordyceps sinensis
OCS_02678
I
0.666
TRIVIDRAFT_34449
Trichoderma virens
TRIVIDRAFT_34449
I
0.666
SS1G_00575
Sclerotinia sclerotiorum
SS1G_00575
I
0.666
MYCTH_2301302
Myceliophthora thermophila
MYCTH_2301302
I
0.666
TRIREDRAFT_69349
Trichoderma reesei
TRIREDRAFT_69349
I
0.666
UCRPA7_1505
Togninia minima
UCRPA7_1505
I
0.666
GMDG_00789
Pseudogymnoascus destructans
GMDG_00789
I
0.665
M438DRAFT_393589
Aureobasidium pullulans
M438DRAFT_393589
I
0.665
V499_05779
Pseudogymnoascus pannorum
V499_05779
I
0.665
M437DRAFT_81253
Aureobasidium melanogenum
M437DRAFT_81253
I
0.665
AUEXF2481DRAFT_78728
Aureobasidium subglaciale
AUEXF2481DRAFT_78728
I
0.665
HCBG_05483
Histoplasma capsulatum
HCBG_05483
I
0.665
G210_0560
Candida maltosa
G210_0560
I
0.665
MBM_03129
Marssonina brunnea
MBM_03129
I
0.664
S40285_05794
Stachybotrys chlorohalonata
S40285_05794
I
0.664
H072_327
Dactylellina haptotyla
H072_327
I
0.664
AOL_s00215g602
Arthrobotrys oligospora
AOL_s00215g602
I
0.664
S40288_01173
Stachybotrys chartarum
S40288_01173
I
0.664
DRE_06212
Drechslerella stenobrocha
DRE_06212
I
0.663
fgenesh1_pg.C_scaffold_1001176
Cryphonectria parasitica
fgenesh1_pg.C_scaffold_1001176
I
0.663
COCSADRAFT_34318
Bipolaris sorokiniana
COCSADRAFT_34318
I
0.662
KLLA0_D04862g
Kluyveromyces lactis
KLLA0_D04862g
I
0.662
LEMA_P019700.1
Leptosphaeria maculans
LEMA_P019700.1
I
0.662
COCMIDRAFT_23254
Bipolaris oryzae
COCMIDRAFT_23254
I
0.662
COCVIDRAFT_40879
Bipolaris victoriae
COCVIDRAFT_40879
I
0.662
COCC4DRAFT_162970
Bipolaris maydis
COCC4DRAFT_162970
I
0.662
SETTUDRAFT_147537
Setosphaeria turcica
SETTUDRAFT_147537
I
0.662
COCCADRAFT_29061
Bipolaris zeicola
COCCADRAFT_29061
I
0.662
SBOR_6602
Sclerotinia borealis
SBOR_6602
I
0.662
Bcin03g02360
Botrytis cinerea
Bcin03g02360
I
0.662
FVEG_07837
Fusarium verticillioides
FVEG_07837
I
0.661
FOXG_01471
Fusarium oxysporum
FOXG_01471
I
0.661
AB07822.1
Alternaria brassicicola
AB07822.1
I
0.661
FFUJ_02499
Fusarium fujikuroi
FFUJ_02499
I
0.661
SNOG_15366
Stagonospora nodorum
SNOG_15366
I
0.660
SNOG_15366
Phaeosphaeria nodorum
SNOG_15366
I
0.660
PTT_09109
Pyrenophora teres
PTT_09109
I
0.659
PV09_00065
Verruconis gallopava
PV09_00065
I
0.659
estExt_fgenesh1_pg.C_chr_80140
Mycosphaerella graminicola
estExt_fgenesh1_pg.C_chr_80140
I
0.659
Mycgr3G110369
Zymoseptoria tritici
Mycgr3G110369
I
0.659
MYCFIDRAFT_10959
Pseudocercospora fijiensis
MYCFIDRAFT_10959
I
0.658
gw1.15.255.1
Mycosphaerella fijiensis
gw1.15.255.1
I
0.658
SEPMUDRAFT_46603
Sphaerulina musiva
SEPMUDRAFT_46603
I
0.658
PGUG_04792
Meyerozyma guilliermondii
PGUG_04792
I
0.658
PGUG_04792
Candida guilliermondii
PGUG_04792
I
0.658
D918_02290
Trichuris suis
D918_02290
I
0.658
PTRG_01267
Pyrenophora triticirepentis
PTRG_01267
I
0.658
CLUG_05348
Clavispora lusitaniae
CLUG_05348
I
0.657
BAUCODRAFT_23427
Baudoinia compniacensis
BAUCODRAFT_23427
I
0.657
CLUG_05348
Candida lusitaniae
CLUG_05348
I
0.657
W97_05844
Coniosporium apollinis
W97_05844
I
0.657
SPU_002235
Strongylocentrotus purpuratus
SPU_002235
I
0.657
DOTSEDRAFT_132769
Dothistroma septosporum
DOTSEDRAFT_132769
I
0.657
FPSE_09383
Fusarium pseudograminearum
FPSE_09383
I
0.656
UV8b_7132
Ustilaginoidea virens
UV8b_7132
I
0.656
CAOG_00356
Capsaspora owczarzaki
CAOG_00356
I
0.655
BGHDH14_bgh05888
Blumeria graminis
BGHDH14_bgh05888
I
0.654
SMAC_06634
Sordaria macrospora
SMAC_06634
I
0.654
estExt_fgenesh2_pg.C_390014
Monosiga brevicollis
estExt_fgenesh2_pg.C_390014
I
0.653
HelroG82191
Helobdella robusta
HelroG82191
I
0.652
DI09_1p30
Microsporidia sp
DI09_1p30
I
0.651
DI09_91p30
Microsporidia sp
DI09_91p30
I
0.651
ENSTSYG00000008562
Tarsius syrichta
ENSTSYG00000008562
I
0.650