PLEOSDRAFT_1038101 (Pleurotus ostreatus)
RFX

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02257 (RFX_DNA_binding) IPR003150 PLEOSDRAFT_1038101 T318756_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RFX1
M00066_2.00 		Saccharomyces cerevisiae
NSGTTGCYAN
NTRGCAACSN		 PBM
Badis et al.(2008)
RFX1_4537 		0.651 0.430
RFX1
M07494_2.00 		Saccharomyces cerevisiae
BGTTRCYA
TRGYAACV		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0365.1 		0.651 0.430
RFX1
M08600_2.00 		Saccharomyces cerevisiae
CGTYRBYAYRGYWACM
KGTWRCYRTRVYRACG		 Misc
DeBoer et al.(2011)
YLR176C_1478 		0.651 0.430
RFX1
M08601_2.00 		Saccharomyces cerevisiae
BGTTRCYA
TRGYAACV		 Misc
DeBoer et al.(2011)
YLR176C_496 		0.651 0.430
RFX1
M11251_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$RFX1_02 		0.651 0.430
For this family, TFs with SR scores > 0.650 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KDQ28948 RFX 195 273

Links

Other RFX family TFs
Other Pleurotus ostreatus TFs

111 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PHLGIDRAFT_115381 Phlebiopsis gigantea PHLGIDRAFT_115381 I 0.784
FOMPIDRAFT_1038544 Fomitopsis pinicola FOMPIDRAFT_1038544 I 0.784
PILCRDRAFT_94503 Piloderma croceum PILCRDRAFT_94503 I 0.784
PHACADRAFT_25186 Phanerochaete carnosa PHACADRAFT_25186 I 0.784
PAXRUDRAFT_31952 Paxillus rubicundulus PAXRUDRAFT_31952 I 0.784
LACBIDRAFT_311799 Laccaria bicolor LACBIDRAFT_311799 I 0.784
M413DRAFT_306124 Hebeloma cylindrosporum M413DRAFT_306124 I 0.784
HETIRDRAFT_170415 Heterobasidion irregulare HETIRDRAFT_170415 I 0.784
CY34DRAFT_103779 Suillus luteus CY34DRAFT_103779 I 0.784
GALMADRAFT_236082 Galerina marginata GALMADRAFT_236082 I 0.784
fgenesh1_pg.C_scaffold_2000774 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_2000774 I 0.784
SERLA73DRAFT_85891 Serpula lacrymans SERLA73DRAFT_85891 I 0.784
AGABI2DRAFT_184602 Agaricus bisporus AGABI2DRAFT_184602 I 0.784
SCHCODRAFT_71685 Schizophyllum commune SCHCODRAFT_71685 I 0.784
K443DRAFT_673983 Laccaria amethystina K443DRAFT_673983 I 0.784
EuGene4000430 Heterobasidion annosum EuGene4000430 I 0.784
M378DRAFT_67300 Amanita muscaria M378DRAFT_67300 I 0.783
FIBRA_04592 Fibroporia radiculosa FIBRA_04592 I 0.783
M404DRAFT_124798 Pisolithus tinctorius M404DRAFT_124798 I 0.782
PISMIDRAFT_670796 Pisolithus microcarpus PISMIDRAFT_670796 I 0.782
JAAARDRAFT_166855 Jaapia argillacea JAAARDRAFT_166855 I 0.782
GLOTRDRAFT_32962 Gloeophyllum trabeum GLOTRDRAFT_32962 I 0.782
SCLCIDRAFT_138144 Scleroderma citrinum SCLCIDRAFT_138144 I 0.782
DICSQDRAFT_106385 Dichomitus squalens DICSQDRAFT_106385 I 0.780
BN946_scf184858.g55 Trametes cinnabarina BN946_scf184858.g55 I 0.780
M407DRAFT_70388 Tulasnella calospora M407DRAFT_70388 I 0.780
Moror_7356 Moniliophthora roreri Moror_7356 N 0.778
CERSUDRAFT_149026 Ceriporiopsis subvermispora CERSUDRAFT_149026 I 0.778
BOTBODRAFT_100719 Botryobasidium botryosum BOTBODRAFT_100719 N 0.776
CC1G_00311 Coprinopsis cinerea CC1G_00311 I 0.776
V565_046180 Rhizoctonia solani V565_046180 N 0.770
PIIN_08876 Piriformospora indica PIIN_08876 N 0.764
M408DRAFT_113587 Serendipita vermifera M408DRAFT_113587 N 0.759
DACRYDRAFT_45233 Dacryopinax sp DACRYDRAFT_45233 I 0.757
PGTG_11391 Puccinia graminis PGTG_11391 I 0.729
PTTG_01668 Puccinia triticina PTTG_01668 I 0.711
fgeneshTM_pg.2_#_559 Tremella mesenterica fgeneshTM_pg.2_#_559 I 0.690
E5Q_03026 Mixia osmundae E5Q_03026 I 0.690
E5Q_03025 Mixia osmundae E5Q_03025 I 0.690
MVLG_04348 Microbotryum violaceum MVLG_04348 I 0.677
SPPG_01648 Spizellomyces punctatus SPPG_01648 I 0.675
A1Q1_00828 Trichosporon asahii A1Q1_00828 I 0.667
GSTUM_00005211001 Tuber melanosporum GSTUM_00005211001 I 0.663
PNEG_02893 Pneumocystis murina PNEG_02893 I 0.662
PredSwiss_ASS2010_3110.1 Pneumocystis carinii PredSwiss_ASS2010_3110.1 I 0.662
PredSwiss_CON653.4 Pneumocystis carinii PredSwiss_CON653.4 I 0.662
GPLIN_000191300 Globodera pallida GPLIN_000191300 I 0.661
O9G_004738 Rozella allomycis O9G_004738 I 0.660
NERG_01713 Nematocida sp NERG_01713 I 0.660
sak1 Schizosaccharomyces pombe SPAC3G9.14 I 0.658
estExt_fgenesh1_pg.C_chr_80140 Mycosphaerella graminicola estExt_fgenesh1_pg.C_chr_80140 I 0.657
NEPG_00460 Nematocida parisii ertm1 NEPG_00460 I 0.657
SJAG_04839 Schizosaccharomyces japonicus SJAG_04839 I 0.657
Mycgr3G110369 Zymoseptoria tritici Mycgr3G110369 I 0.657
SAKL0D08734g Lachancea kluyveri SAKL0D08734g I 0.657
TDEL_0B05980 Torulaspora delbrueckii TDEL_0B05980 I 0.656
AACERI_AaceriAAL010W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAAL010W I 0.655
YALI0_E13596g Yarrowia lipolytica YALI0_E13596g I 0.655
AGOS_AAL010W Ashbya gossypii AGOS_AAL010W I 0.655
MYCFIDRAFT_10959 Pseudocercospora fijiensis MYCFIDRAFT_10959 I 0.654
14959_Multiple Saccharomyces mikatae 14959_Multiple I 0.654
BDDG_02784 Blastomyces dermatitidis BDDG_02784 I 0.654
ACRE_029400 Acremonium chrysogenum ACRE_029400 I 0.654
gw1.15.255.1 Mycosphaerella fijiensis gw1.15.255.1 I 0.654
HelroG82191 Helobdella robusta HelroG82191 I 0.654
BAUCODRAFT_23427 Baudoinia compniacensis BAUCODRAFT_23427 I 0.653
GNLVRS01_PISO0F09355g Millerozyma farinosa GNLVRS01_PISO0F09355g I 0.653
GNLVRS01_PISO0E08012g Millerozyma farinosa GNLVRS01_PISO0E08012g I 0.653
CAGL0H03751g Candida glabrata CAGL0H03751g I 0.653
DOTSEDRAFT_132769 Dothistroma septosporum DOTSEDRAFT_132769 I 0.653
KAFR_0I02180 Kazachstania africana KAFR_0I02180 I 0.653
PMAA_084960 Penicillium marneffei PMAA_084960 I 0.652
PVAR5_6603 Byssochlamys spectabilis PVAR5_6603 I 0.652
TSTA_119980 Talaromyces stipitatus TSTA_119980 I 0.652
SMUV_0001085601 Syphacia muris SMUV_0001085601 I 0.652
PMAA_084960 Talaromyces marneffei PMAA_084960 I 0.652
HCBG_05483 Histoplasma capsulatum HCBG_05483 I 0.652
CAGL0B04895g Candida glabrata CAGL0B04895g I 0.652
LALA0_S03e09428g Lachancea lanzarotensis LALA0_S03e09428g I 0.652
ML02801a Mnemiopsis leidyi ML02801a I 0.652
ATEG_09416 Aspergillus terreus CADATEAG00008983 I 0.651
PAAG_00480 Paracoccidioides sp lutzii PAAG_00480 I 0.651
PABG_06744 Paracoccidioides brasiliensis PABG_06744 I 0.651
estExt_genewise1_worm.C_chr_6.10133 Pichia stipitis estExt_genewise1_worm.C_chr_6.10133 I 0.651
NFIA_036980 Neosartorya fischeri CADNFIAG00003299 I 0.651
fgenesh1_pg.00162_#_176 Aspergillus carbonarius fgenesh1_pg.00162_#_176 I 0.651
EVEC_0001085201 Enterobius vermicularis EVEC_0001085201 I 0.651
EURHEDRAFT_516724 Aspergillus ruber EURHEDRAFT_516724 I 0.651
CORT_0D05100 Candida orthopsilosis CORT_0D05100 I 0.651
Pc20g01690 Penicillium chrysogenum Pc20g01690 I 0.651
CPAG_04140 Candida parapsilosis CPAG_04140 I 0.651
16177_Multiple Saccharomyces paradoxus 16177_Multiple I 0.651
ZYRO0E04642g Zygosaccharomyces rouxii ZYRO0E04642g I 0.651
SEPMUDRAFT_46603 Sphaerulina musiva SEPMUDRAFT_46603 I 0.651
CADANGAG00013568 Aspergillus niger CADANGAG00013568 I 0.651
ANIA_02296 Aspergillus nidulans CADANIAG00008989 I 0.651
AFUA_5G06120 Aspergillus fumigatus CADAFUAG00006202 I 0.651
CADAFLAG00010851 Aspergillus flavus CADAFLAG00010851 I 0.651
PITC_028740 Penicillium italicum PITC_028740 I 0.651
ACLA_009440 Aspergillus clavatus CADACLAG00001004 I 0.651
SOCG_01623 Schizosaccharomyces octosporus SOCG_01623 I 0.651
PEX1_087840 Penicillium expansum PEX1_087840 I 0.651
RFX1 Saccharomyces cerevisiae YLR176C D 0.651
PDIP_47410 Penicillium digitatum PDIP_47410 I 0.651
PCH_Pc20g01690 Penicillium rubens PCH_Pc20g01690 I 0.651
CADAORAG00004061 Aspergillus oryzae CADAORAG00004061 I 0.651
U727_0043066021 Penicillium solitum U727_0043066021 I 0.651
PDE_02161 Penicillium oxalicum PDE_02161 I 0.650
SPAPADRAFT_70246 Spathaspora passalidarum SPAPADRAFT_70246 I 0.650
AMAG_11601 Allomyces macrogynus AMAG_11601 I 0.650
AMAG_10999 Allomyces macrogynus AMAG_10999 I 0.650