SCLCIDRAFT_138144 (Scleroderma citrinum)
RFX

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02257 (RFX_DNA_binding) IPR003150 SCLCIDRAFT_138144 T318782_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RFX1
M00066_2.00
Saccharomyces cerevisiae
NSGTTGCYAN

NTRGCAACSN
PBM
Badis et al.(2008)
RFX1_4537
0.652 0.430
RFX1
M07494_2.00
Saccharomyces cerevisiae
BGTTRCYA

TRGYAACV
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0365.1
0.652 0.430
RFX1
M08600_2.00
Saccharomyces cerevisiae
CGTYRBYAYRGYWACM

KGTWRCYRTRVYRACG
Misc
DeBoer et al.(2011)
YLR176C_1478
0.652 0.430
RFX1
M08601_2.00
Saccharomyces cerevisiae
BGTTRCYA

TRGYAACV
Misc
DeBoer et al.(2011)
YLR176C_496
0.652 0.430
RFX1
M11251_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$RFX1_02
0.652 0.430
For this family, TFs with SR scores > 0.650 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KIM53792 RFX 196 274

Links

Other RFX family TFs
Other Scleroderma citrinum TFs

136 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
M404DRAFT_124798 Pisolithus tinctorius M404DRAFT_124798 I 0.788
PISMIDRAFT_670796 Pisolithus microcarpus PISMIDRAFT_670796 I 0.788
M378DRAFT_67300 Amanita muscaria M378DRAFT_67300 I 0.786
PILCRDRAFT_94503 Piloderma croceum PILCRDRAFT_94503 I 0.786
M413DRAFT_306124 Hebeloma cylindrosporum M413DRAFT_306124 I 0.786
PHLGIDRAFT_115381 Phlebiopsis gigantea PHLGIDRAFT_115381 I 0.786
CY34DRAFT_103779 Suillus luteus CY34DRAFT_103779 I 0.786
HETIRDRAFT_170415 Heterobasidion irregulare HETIRDRAFT_170415 I 0.786
PHACADRAFT_25186 Phanerochaete carnosa PHACADRAFT_25186 I 0.786
AGABI2DRAFT_184602 Agaricus bisporus AGABI2DRAFT_184602 I 0.786
FOMPIDRAFT_1038544 Fomitopsis pinicola FOMPIDRAFT_1038544 I 0.786
fgenesh1_pg.C_scaffold_2000774 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_2000774 I 0.786
EuGene4000430 Heterobasidion annosum EuGene4000430 I 0.786
K443DRAFT_673983 Laccaria amethystina K443DRAFT_673983 I 0.786
GALMADRAFT_236082 Galerina marginata GALMADRAFT_236082 I 0.786
SCHCODRAFT_71685 Schizophyllum commune SCHCODRAFT_71685 I 0.786
SERLA73DRAFT_85891 Serpula lacrymans SERLA73DRAFT_85891 I 0.786
LACBIDRAFT_311799 Laccaria bicolor LACBIDRAFT_311799 I 0.786
JAAARDRAFT_166855 Jaapia argillacea JAAARDRAFT_166855 I 0.785
GLOTRDRAFT_32962 Gloeophyllum trabeum GLOTRDRAFT_32962 I 0.785
BN946_scf184858.g55 Trametes cinnabarina BN946_scf184858.g55 I 0.783
M407DRAFT_70388 Tulasnella calospora M407DRAFT_70388 I 0.783
DICSQDRAFT_106385 Dichomitus squalens DICSQDRAFT_106385 I 0.783
PLEOSDRAFT_1038101 Pleurotus ostreatus PLEOSDRAFT_1038101 I 0.782
CERSUDRAFT_149026 Ceriporiopsis subvermispora CERSUDRAFT_149026 I 0.781
PAXRUDRAFT_31952 Paxillus rubicundulus PAXRUDRAFT_31952 I 0.781
Moror_7356 Moniliophthora roreri Moror_7356 N 0.781
BOTBODRAFT_100719 Botryobasidium botryosum BOTBODRAFT_100719 N 0.780
FIBRA_04592 Fibroporia radiculosa FIBRA_04592 I 0.779
CC1G_00311 Coprinopsis cinerea CC1G_00311 I 0.778
V565_046180 Rhizoctonia solani V565_046180 N 0.773
PIIN_08876 Piriformospora indica PIIN_08876 N 0.767
M408DRAFT_113587 Serendipita vermifera M408DRAFT_113587 N 0.762
DACRYDRAFT_45233 Dacryopinax sp DACRYDRAFT_45233 I 0.759
PGTG_11391 Puccinia graminis PGTG_11391 I 0.731
PTTG_01668 Puccinia triticina PTTG_01668 I 0.712
E5Q_03025 Mixia osmundae E5Q_03025 I 0.697
E5Q_03026 Mixia osmundae E5Q_03026 I 0.697
fgeneshTM_pg.2_#_559 Tremella mesenterica fgeneshTM_pg.2_#_559 I 0.695
MVLG_04348 Microbotryum violaceum MVLG_04348 I 0.682
SPPG_01648 Spizellomyces punctatus SPPG_01648 I 0.675
A1Q1_00828 Trichosporon asahii A1Q1_00828 I 0.672
O9G_004738 Rozella allomycis O9G_004738 I 0.667
GPLIN_000191300 Globodera pallida GPLIN_000191300 I 0.666
NERG_01713 Nematocida sp NERG_01713 I 0.664
PNEG_02893 Pneumocystis murina PNEG_02893 I 0.663
PredSwiss_CON653.4 Pneumocystis carinii PredSwiss_CON653.4 I 0.663
PredSwiss_ASS2010_3110.1 Pneumocystis carinii PredSwiss_ASS2010_3110.1 I 0.663
GSTUM_00005211001 Tuber melanosporum GSTUM_00005211001 I 0.662
NEPG_00460 Nematocida parisii ertm1 NEPG_00460 I 0.660
Mycgr3G110369 Zymoseptoria tritici Mycgr3G110369 I 0.658
estExt_fgenesh1_pg.C_chr_80140 Mycosphaerella graminicola estExt_fgenesh1_pg.C_chr_80140 I 0.658
CAGL0H03751g Candida glabrata CAGL0H03751g I 0.657
SMUV_0001085601 Syphacia muris SMUV_0001085601 I 0.657
sak1 Schizosaccharomyces pombe SPAC3G9.14 I 0.657
SAKL0D08734g Lachancea kluyveri SAKL0D08734g I 0.657
BDDG_02784 Blastomyces dermatitidis BDDG_02784 I 0.656
SJAG_04839 Schizosaccharomyces japonicus SJAG_04839 I 0.656
EVEC_0001085201 Enterobius vermicularis EVEC_0001085201 I 0.656
AACERI_AaceriAAL010W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAAL010W I 0.655
AGOS_AAL010W Ashbya gossypii AGOS_AAL010W I 0.655
YALI0_E13596g Yarrowia lipolytica YALI0_E13596g I 0.655
CAGL0B04895g Candida glabrata CAGL0B04895g I 0.655
ZYRO0E04642g Zygosaccharomyces rouxii ZYRO0E04642g I 0.655
14959_Multiple Saccharomyces mikatae 14959_Multiple I 0.654
PMAA_084960 Talaromyces marneffei PMAA_084960 I 0.654
PMAA_084960 Penicillium marneffei PMAA_084960 I 0.654
ACRE_029400 Acremonium chrysogenum ACRE_029400 I 0.654
PVAR5_6603 Byssochlamys spectabilis PVAR5_6603 I 0.654
tetur19g03130 Tetranychus urticae tetur19g03130 I 0.654
DOTSEDRAFT_132769 Dothistroma septosporum DOTSEDRAFT_132769 I 0.654
gw1.15.255.1 Mycosphaerella fijiensis gw1.15.255.1 I 0.654
HCBG_05483 Histoplasma capsulatum HCBG_05483 I 0.654
TDEL_0B05980 Torulaspora delbrueckii TDEL_0B05980 I 0.654
TSTA_119980 Talaromyces stipitatus TSTA_119980 I 0.654
MYCFIDRAFT_10959 Pseudocercospora fijiensis MYCFIDRAFT_10959 I 0.654
PTSG_10225 Salpingoeca rosetta PTSG_10225 I 0.653
ZBAI_08430 Zygosaccharomyces bailii ZBAI_08430 I 0.653
ZBAI_03427 Zygosaccharomyces bailii ZBAI_03427 I 0.653
fgenesh1_pg.00162_#_176 Aspergillus carbonarius fgenesh1_pg.00162_#_176 I 0.653
BAUCODRAFT_23427 Baudoinia compniacensis BAUCODRAFT_23427 I 0.653
PABG_06744 Paracoccidioides brasiliensis PABG_06744 I 0.653
ANIA_02296 Aspergillus nidulans CADANIAG00008989 I 0.653
EURHEDRAFT_516724 Aspergillus ruber EURHEDRAFT_516724 I 0.653
PAAG_00480 Paracoccidioides sp lutzii PAAG_00480 I 0.653
CADAORAG00004061 Aspergillus oryzae CADAORAG00004061 I 0.653
NFIA_036980 Neosartorya fischeri CADNFIAG00003299 I 0.653
ATEG_09416 Aspergillus terreus CADATEAG00008983 I 0.653
ACLA_009440 Aspergillus clavatus CADACLAG00001004 I 0.653
GNLVRS01_PISO0E08012g Millerozyma farinosa GNLVRS01_PISO0E08012g I 0.653
PDE_02161 Penicillium oxalicum PDE_02161 I 0.653
CADAFLAG00010851 Aspergillus flavus CADAFLAG00010851 I 0.653
HelroG82191 Helobdella robusta HelroG82191 I 0.653
CADANGAG00013568 Aspergillus niger CADANGAG00013568 I 0.653
AFUA_5G06120 Aspergillus fumigatus CADAFUAG00006202 I 0.653
GNLVRS01_PISO0F09355g Millerozyma farinosa GNLVRS01_PISO0F09355g I 0.653
CPC735_025690 Coccidioides posadasii CPC735_025690 I 0.652
A1O1_08600 Capronia coronata A1O1_08600 I 0.652
UREG_04378 Uncinocarpus reesii UREG_04378 I 0.652
HMPREF1120_04684 Exophiala dermatitidis HMPREF1120_04684 I 0.652
Z517_10332 Fonsecaea pedrosoi Z517_10332 I 0.652
U727_0043066021 Penicillium solitum U727_0043066021 I 0.652
16177_Multiple Saccharomyces paradoxus 16177_Multiple I 0.652
RFX1 Saccharomyces cerevisiae YLR176C D 0.652
A1O5_04383 Cladophialophora psammophila A1O5_04383 I 0.652
LALA0_S03e09428g Lachancea lanzarotensis LALA0_S03e09428g I 0.652
CIMG_05985 Coccidioides immitis CIMG_05985 I 0.652
PV05_05335 Exophiala xenobiotica PV05_05335 I 0.652
PDIP_47410 Penicillium digitatum PDIP_47410 I 0.652
PEX1_087840 Penicillium expansum PEX1_087840 I 0.652
PITC_028740 Penicillium italicum PITC_028740 I 0.652
PV06_00023 Exophiala oligosperma PV06_00023 I 0.652
PV08_04071 Exophiala spinifera PV08_04071 I 0.652
Pc20g01690 Penicillium chrysogenum Pc20g01690 I 0.652
PV10_05596 Exophiala mesophila PV10_05596 I 0.652
PCH_Pc20g01690 Penicillium rubens PCH_Pc20g01690 I 0.652
SCUD_0002149801 Schistosoma curassoni SCUD_0002149801 N 0.651
SROB_0002099101 Schistosoma rodhaini SROB_0002099101 N 0.651
XP_002492053.1 Pichia pastoris XP_002492053.1 I 0.651
MCYG_06867 Microsporum canis MCYG_06867 I 0.651
SMTD_0001942901 Schistosoma mattheei SMTD_0001942901 N 0.651
PV07_06647 Cladophialophora immunda PV07_06647 I 0.651
PAS_chr2-2_0153 Komagataella pastoris PAS_chr2-2_0153 I 0.651
ARB_07111 Arthroderma benhamiae ARB_07111 I 0.651
MGYG_03742 Microsporum gypseum MGYG_03742 I 0.651
MCYG_06867 Arthroderma otae MCYG_06867 I 0.651
H101_06747 Trichophyton interdigitale H101_06747 I 0.651
KAFR_0I02180 Kazachstania africana KAFR_0I02180 I 0.651
H102_04304 Trichophyton rubrum H102_04304 I 0.651
PV11_01295 Exophiala sideris PV11_01295 I 0.651
TRV_04907 Trichophyton verrucosum TRV_04907 I 0.651
A1O9_03272 Exophiala aquamarina A1O9_03272 I 0.651
TESG_00180 Trichophyton tonsurans TESG_00180 I 0.651
TEQG_02965 Trichophyton equinum TEQG_02965 I 0.651
SEPMUDRAFT_46603 Sphaerulina musiva SEPMUDRAFT_46603 I 0.651
estExt_genewise1_worm.C_chr_6.10133 Pichia stipitis estExt_genewise1_worm.C_chr_6.10133 I 0.651