Myotis_brandtii_RFX6_10035596 (Myotis brandtii)
RFX

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02257 (RFX_DNA_binding) IPR003150 Myotis_brandtii_RFX6_10035596 T319005_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Rfx6
M09365_2.00
Mus musculus
BDGTWKCYNDG

CHNRGMAACHV
Misc
Kulakovskiy et al.(2013)
RFX6_MOUSE.H11MO.0.C
0.722 0.940
RFX4
M02448_2.00
Cavia porcellus
GTHDYYNNGN

NCNNRRHDAC
PBM
Weirauch et al.(2014)
pTH9249
0.667 0.620
Rfx4
M00186_2.00
Mus musculus
GTHDYYNNSN

NSNNRRHDAC
PBM
Badis et al.(2009)
Rfx4_3761
0.667 0.620
RFX4
M03456_2.00
Homo sapiens
NGTWRYCATRGHWACN

NGTWDCYATGRYWACN
SELEX
Jolma et al.(2013)
RFX4_1
0.667 0.620
RFX4
M03457_2.00
Homo sapiens
NGTTGCYRRGCAACS

SGTTGCYYRGCAACN
SELEX
Jolma et al.(2013)
RFX4_2
0.667 0.620
RFX4
M05721_2.00
Homo sapiens
BGTWRYCATGRYWACV

BGTWRYCATGRYWACV
SELEX
Yin et al.(2017)
RFX4_eDBD_HT-SELEX
0.667 0.620
RFX4
M05722_2.00
Homo sapiens
BGTWRYCATGRYWACV

BGTWRYCATGRYWACV
SELEX
Yin et al.(2017)
RFX4_eDBD_Methyl-HT-SELEX
0.667 0.620
For this family, TFs with SR scores > 0.650 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Myotis_brandtii_RFX6_10035596 RFX 46 95

Links

Other RFX family TFs
Other Myotis brandtii TFs

166 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Ogr10888 Ophisaurus gracilis Ogr10888 I 0.742
RFX6 Echinops telfairi ENSETEG00000005677 I 0.728
RFX6 Gorilla gorilla ENSGGOG00000006982 I 0.727
RFX6 Meleagris gallopavo ENSMGAG00000013368 I 0.724
RFX6 Myotis lucifugus ENSMLUG00000006665 I 0.724
RFX6 Macaca mulatta ENSMMUG00000017189 I 0.724
ENSMPUG00000014252 Mustela putorius furo ENSMPUG00000014252 I 0.724
RFX6 Monodelphis domestica ENSMODG00000017815 I 0.724
Aan_R009636 Calypte anna Aan_R009636 I 0.724
ENSLACG00000004044 Latimeria chalumnae ENSLACG00000004044 I 0.724
RFX6 Homo sapiens ENSG00000185002 I 0.724
RFX6 Felis catus ENSFCAG00000018903 I 0.724
rfx6 Gasterosteus aculeatus ENSGACG00000005840 I 0.724
ENSBTAP00000000329-D1 Bos grunniens ENSBTAP00000000329-D1 I 0.724
ENSNLEG00000013258 Nomascus leucogenys ENSNLEG00000013258 I 0.724
RFX6 Gallus gallus ENSGALG00000014918 I 0.724
ENSSHAG00000009393 Sarcophilus harrisii ENSSHAG00000009393 I 0.724
ENSOARG00000008929 Ovis aries ENSOARG00000008929 I 0.724
ENSPPYG00000016960 Pongo abelii ENSPPYG00000016960 I 0.724
RFX6 Taeniopygia guttata ENSTGUG00000011924 I 0.724
ENSPFOG00000003162 Poecilia formosa ENSPFOG00000003162 I 0.724
ENSPSIG00000008368 Pelodiscus sinensis ENSPSIG00000008368 I 0.724
RFX6 Pan troglodytes ENSPTRG00000018540 I 0.724
ENSSTOG00000012365 Ictidomys tridecemlineatus ENSSTOG00000012365 I 0.724
RFX6 Pteropus vampyrus ENSPVAG00000000614 I 0.724
rfx6 Tetraodon nigroviridis ENSTNIG00000009728 I 0.724
ENSPANG00000008240 Papio anubis ENSPANG00000008240 I 0.724
RFX6 Otolemur garnettii ENSOGAG00000011937 I 0.724
ENSXMAG00000015726 Xiphophorus maculatus ENSXMAG00000015726 I 0.724
RFX6 Oryctolagus cuniculus ENSOCUG00000013227 I 0.724
RFX6 Vicugna pacos ENSVPAG00000002198 I 0.724
ENSONIG00000015740 Oreochromis niloticus ENSONIG00000015740 I 0.724
ENSTSYG00000008237 Tarsius syrichta ENSTSYG00000008237 I 0.724
RFX6 Tursiops truncatus ENSTTRG00000011052 I 0.724
ENSMMUP00000022612 Macaca fascicularis ENSMMUP00000022612 I 0.724
RFX6 Loxodonta africana ENSLAFG00000003465 I 0.724
Gfo_R016155 Geospiza fortis Gfo_R016155 I 0.724
ENSAPLG00000002929 Anas platyrhynchos ENSAPLG00000002929 I 0.724
RFX6 Anolis carolinensis ENSACAG00000014185 I 0.724
ENSAMEG00000005843 Ailuropoda melanoleuca ENSAMEG00000005843 I 0.724
RFX6 Dasypus novemcinctus ENSDNOG00000019162 I 0.724
ENSCSAG00000015856 Chlorocebus sabaeus ENSCSAG00000015856 I 0.724
RFX6 Callithrix jacchus ENSCJAG00000004349 I 0.724
Rfx6 Dipodomys ordii ENSDORG00000013591 I 0.724
RFX6 Bos taurus ENSBTAG00000000264 I 0.724
RFX6 Canis familiaris ENSCAFG00000000915 I 0.724
ENSFALG00000011057 Ficedula albicollis ENSFALG00000011057 I 0.724
RFX6 Equus caballus ENSECAG00000019804 I 0.724
RFX6 Erinaceus europaeus ENSEEUG00000001945 I 0.724
rfx6.L Xenopus laevis XB-GENE-6488525 I 0.724
rfx6 Xenopus tropicalis XB-GENE-1013164 I 0.724
ENSLOCG00000017133 Lepisosteus oculatus ENSLOCG00000017133 I 0.723
ENSAMXG00000017899 Astyanax mexicanus ENSAMXG00000017899 I 0.722
Rfx6 Mus musculus ENSMUSG00000019900 D 0.722
rfx6 Danio rerio ENSDARG00000041702 I 0.721
rfx6 Takifugu rubripes ENSTRUG00000008447 I 0.721
RFX6 Tupaia belangeri ENSTBEG00000011557 I 0.719
RFX6 Cavia porcellus ENSCPOG00000015023 I 0.716
SPU_011477 Strongylocentrotus purpuratus SPU_011477 I 0.714
Sakowv30020492m.g Saccoglossus kowalevskii Sakowv30020492m.g I 0.714
ENSORLG00000018626 Oryzias latipes ENSORLG00000018626 I 0.713
ENSGMOG00000018155 Gadus morhua ENSGMOG00000018155 I 0.713
Brh_R008084 Buceros rhinoceros Brh_R008084 I 0.712
Afo_R005589 Aptenodytes forsteri Afo_R005589 I 0.712
Tal_R000797 Tyto alba Tal_R000797 I 0.712
SPU_025817 Strongylocentrotus purpuratus SPU_025817 I 0.711
LotgiG122187 Lottia gigantea LotgiG122187 I 0.709
RFX6 Sorex araneus ENSSARG00000012002 I 0.708
ENSMICG00000009092 Microcebus murinus ENSMICG00000009092 I 0.708
SMAR001902 Strigamia maritima SMAR001902 I 0.706
ENSOANG00000020392 Ornithorhynchus anatinus ENSOANG00000020392 I 0.705
Ocbimv22008419m.g Octopus bimaculoides Ocbimv22008419m.g I 0.704
fgenesh2_pg.scaffold_44000109 Branchiostoma floridae fgenesh2_pg.scaffold_44000109 I 0.697
NEMVEDRAFT_v1g85569 Nematostella vectensis NEMVEDRAFT_v1g85569 I 0.695
CapteG220726 Capitella teleta CapteG220726 I 0.690
fgenesh2_pg.scaffold_117000002 Branchiostoma floridae fgenesh2_pg.scaffold_117000002 I 0.686
Ocbimv22026231m.g Octopus bimaculoides Ocbimv22026231m.g I 0.679
ENSMEUG00000007718 Macropus eugenii ENSMEUG00000007718 I 0.677
RFX4 Vicugna pacos ENSVPAG00000008521 I 0.677
RFX4 Homo sapiens ENSG00000111783 D 0.675
tetur35g00700 Tetranychus urticae tetur35g00700 I 0.671
XP_002167174.1 Hydra magnipapillata XP_002167174.1 I 0.670
ENSETEG00000007550 Echinops telfairi ENSETEG00000007550 I 0.670
CGI_10006760 Crassostrea gigas CGI_10006760 I 0.669
SMAR011197 Strigamia maritima SMAR011197 I 0.669
ENSSTOG00000015740 Ictidomys tridecemlineatus ENSSTOG00000015740 I 0.669
Sakowv30020494m.g Saccoglossus kowalevskii Sakowv30020494m.g I 0.668
TriadG51678 Trichoplax adhaerens TriadG51678 I 0.668
RFX4 Tupaia belangeri ENSTBEG00000014680 I 0.667
ENSBTAP00000000169-D1 Bos grunniens ENSBTAP00000000169-D1 I 0.667
ENSSHAG00000013027 Sarcophilus harrisii ENSSHAG00000013027 I 0.667
Myotis_brandtii_RFX4_10020417 Myotis brandtii Myotis_brandtii_RFX4_10020417 I 0.667
RFX4 Tursiops truncatus ENSTTRG00000010688 I 0.667
ENSXMAG00000001638 Xiphophorus maculatus ENSXMAG00000001638 I 0.667
ENSP00000350552 Macaca fascicularis ENSP00000350552 I 0.667
Aan_R008662 Calypte anna Aan_R008662 I 0.667
Afo_R011060 Aptenodytes forsteri Afo_R011060 I 0.667
ENSTGUG00000011025 Taeniopygia guttata ENSTGUG00000011025 I 0.667
Brh_R002885 Buceros rhinoceros Brh_R002885 I 0.667
Sakowv30039514m.g Saccoglossus kowalevskii Sakowv30039514m.g I 0.667
Gfo_R004629 Geospiza fortis Gfo_R004629 I 0.667
RFX4 Ochotona princeps ENSOPRG00000008616 I 0.667
ENSNLEG00000006695 Nomascus leucogenys ENSNLEG00000006695 I 0.667
rfx4 Danio rerio ENSDARG00000026395 I 0.667
Rfx4 Mus musculus ENSMUSG00000020037 D 0.667
ENSCSAG00000002952 Chlorocebus sabaeus ENSCSAG00000002952 I 0.667
ENSOANG00000005534 Ornithorhynchus anatinus ENSOANG00000005534 I 0.667
RFX4 Felis catus ENSFCAG00000015618 I 0.667
ENSOARG00000017616 Ovis aries ENSOARG00000017616 I 0.667
RFX4 Cavia porcellus ENSCPOG00000001750 D 0.667
RFX4 Equus caballus ENSECAG00000005111 I 0.667
RFX4 Macaca mulatta ENSMMUG00000022118 I 0.667
ENSFALG00000013407 Ficedula albicollis ENSFALG00000013407 I 0.667
ENSGMOG00000004267 Gadus morhua ENSGMOG00000004267 I 0.667
RFX4 Gorilla gorilla ENSGGOG00000007759 I 0.667
ENSLACG00000017280 Latimeria chalumnae ENSLACG00000017280 I 0.667
RFX4 Loxodonta africana ENSLAFG00000014122 I 0.667
RFX4 Myotis lucifugus ENSMLUG00000016257 I 0.667
RFX4 Meleagris gallopavo ENSMGAG00000012867 I 0.667
ENSLOCG00000015258 Lepisosteus oculatus ENSLOCG00000015258 I 0.667
RFX4 Gallus gallus ENSGALG00000012647 I 0.667
RFX4 Canis familiaris ENSCAFG00000001813 I 0.667
ENSPANG00000006357 Papio anubis ENSPANG00000006357 I 0.667
ENSAPLG00000005849 Anas platyrhynchos ENSAPLG00000005849 I 0.667
RFX4 Pteropus vampyrus ENSPVAG00000005862 I 0.667
RFX4 Pan troglodytes ENSPTRG00000005391 I 0.667
RFX4 Procavia capensis ENSPCAG00000005023 I 0.667
ENSPPYG00000004906 Pongo abelii ENSPPYG00000004906 I 0.667
ENSPFOG00000016523 Poecilia formosa ENSPFOG00000016523 I 0.667
RFX4 Anolis carolinensis ENSACAG00000015355 I 0.667
rfx4 Oryzias latipes ENSORLG00000011114 I 0.667
RFX4 Otolemur garnettii ENSOGAG00000003546 I 0.667
RFX4 Oryctolagus cuniculus ENSOCUG00000028228 I 0.667
ENSONIG00000014750 Oreochromis niloticus ENSONIG00000014750 I 0.667
ENSAMXG00000020148 Astyanax mexicanus ENSAMXG00000020148 I 0.667
ENSAMEG00000016059 Ailuropoda melanoleuca ENSAMEG00000016059 I 0.667
rfx4 Gasterosteus aculeatus ENSGACG00000011830 I 0.667
ENSPSIG00000015178 Pelodiscus sinensis ENSPSIG00000015178 I 0.667
Rfx4 Dipodomys ordii ENSDORG00000003959 I 0.665
rfx4 Tetraodon nigroviridis ENSTNIG00000012137 I 0.665
rfx4 Takifugu rubripes ENSTRUG00000008925 I 0.665
CapteG183181 Capitella teleta CapteG183181 I 0.664
ENSMPUG00000012144 Mustela putorius furo ENSMPUG00000012144 I 0.664
LotgiG113173 Lottia gigantea LotgiG113173 I 0.663
CapteG108705 Capitella teleta CapteG108705 I 0.663
tetur18g01090 Tetranychus urticae tetur18g01090 I 0.662
DAPPUDRAFT_42744 Daphnia pulex DAPPUDRAFT_42744 I 0.659
HelroG184328 Helobdella robusta HelroG184328 I 0.658
CGI_10018775 Crassostrea gigas CGI_10018775 I 0.657
ENSTSYG00000008562 Tarsius syrichta ENSTSYG00000008562 I 0.656
RFX1 Ochotona princeps ENSOPRG00000003641 I 0.655
Rfx4 Rattus norvegicus ENSRNOG00000051536 I 0.653
ENSSSCG00000000168 Sus scrofa ENSSSCG00000000168 I 0.653
ENSOCUG00000023815 Oryctolagus cuniculus ENSOCUG00000023815 I 0.653
NEMVEDRAFT_v1g110404 Nematostella vectensis NEMVEDRAFT_v1g110404 I 0.653
rfx1b Danio rerio ENSDARG00000075904 I 0.652
ENSAMXG00000010111 Astyanax mexicanus ENSAMXG00000010111 I 0.652
SPU_020781 Strongylocentrotus purpuratus SPU_020781 I 0.652
csin108803 Clonorchis sinensis csin108803 I 0.651
T265_05437 Opisthorchis viverrini T265_05437 I 0.651
Rfx2 Rattus norvegicus ENSRNOG00000045846 I 0.651
Alligator_sinensis_CCG009361.1 Alligator sinensis Alligator_sinensis_CCG009361.1 I 0.651
Rfx2 Mus musculus ENSMUSG00000024206 D 0.651
TTRE_0000199701 Trichuris trichiura TTRE_0000199701 I 0.650
TMUE_s0029001200 Trichuris muris TMUE_s0029001200 I 0.650
PHUM236330 Pediculus humanus PHUM236330 I 0.650