CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gw.501.1.1
(
Branchiostoma floridae
)
RFX
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02257 (RFX_DNA_binding)
IPR003150
gw.501.1.1
T319046_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Rfx6
M09365_2.00
Mus musculus
BDGTWKCYNDG
CHNRGMAACHV
Misc
Kulakovskiy et al.(2013)
RFX6_MOUSE.H11MO.0.C
0.655
0.938
For this family, TFs with SR scores >
0.650
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
gw.501.1.1
RFX
1
32
QTIRQKFPHLTTRRLGTRGHSKYHYYGIGIKE
Links
Other
RFX
family TFs
Other
Branchiostoma floridae
TFs
71 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy