CpipJ_CPIJ001309 (Culex pipiens)
Runt

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00853 (Runt) IPR013524 CpipJ_CPIJ001309 T319275_2.00 Broad (2016-May-1)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
run
M06444_2.00
Drosophila melanogaster
WAACCGCAR

YTGCGGTTW
B1H
Zhu et al.(2011)
run_Bgb_NBT_FBgn0003300
0.823 0.823
Runx1
M08163_2.00
Mus musculus
HRRCCACARVN

NBYTGTGGYYD
ChIP-seq
Mathelier et al.(2014)
MA0002.2
0.700 0.700
RUNX1
M09371_2.00
Homo sapiens
NWAACCACARV

BYTGTGGTTWN
Misc
Kulakovskiy et al.(2013)
RUNX1_HUMAN.H11MO.0.A
0.700 0.700
Runx1
M09372_2.00
Mus musculus
VWRACCACARVV

BBYTGTGGTYWB
Misc
Kulakovskiy et al.(2013)
RUNX1_MOUSE.H11MO.0.A
0.700 0.700
RUNX1
M09632_2.00
Homo sapiens
HAACCACADV

BHTGTGGTTD
Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE29180
0.700 0.700
RUNX1
M09631_2.00
Homo sapiens
VCCACWTCCTBY

RVAGGAWGTGGB
Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE17954
0.700 0.700
Runx1
M09633_2.00
Mus musculus
NWAACCACAR

YTGTGGTTWN
Misc
Heinz et al.(2010)
HPC7-Runx1_GSE22178
0.700 0.700
RUNX1
M11258_2.00
Homo sapiens
ACCRCA

TGYGGT
Transfac
Matys et al.(2006)
V$AML1_01
0.700 0.700
RUNX1
M11259_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q4_01
0.700 0.700
RUNX1
M11260_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q4_02
0.700 0.700
RUNX1
M11261_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q4
0.700 0.700
RUNX1
M11262_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q5
0.700 0.700
RUNX1
M11263_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q6
0.700 0.700
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CpipJ_CPIJ001309-RA Runt 24 153

Links

Other Runt family TFs
Other Culex pipiens TFs

160 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
CPIJ001309 Culex quinquefasciatus CPIJ001309 I 1.000
AMIN005759 Anopheles minimus AMIN005759 I 0.892
ADIR005600 Anopheles dirus ADIR005600 I 0.892
AEPI010884 Anopheles epiroticus AEPI010884 I 0.892
AFUN010423 Anopheles funestus AFUN010423 I 0.892
AMAM016300 Anopheles maculatus AMAM016300 I 0.892
ACUA016618 Anopheles culicifacies ACUA016618 I 0.892
ACHR006341 Anopheles christyi ACHR006341 I 0.892
AALB007754 Anopheles albimanus AALB007754 I 0.892
AATE017340 Anopheles atroparvus AATE017340 I 0.892
ASTEI07770 Anopheles stephensi ASTEI07770 I 0.892
AFAF000166 Anopheles farauti AFAF000166 I 0.892
ASIS001308 Anopheles sinensis ASIS001308 I 0.892
AARA011472 Anopheles arabiensis AARA011472 I 0.885
ACOM031089 Anopheles coluzzii ACOM031089 I 0.885
AGAP001094 Anopheles gambiae AGAP001094 I 0.885
AMEC007551 Anopheles melas AMEC007551 I 0.885
AQUA009970 Anopheles quadriannulatus AQUA009970 I 0.885
AMEM004753 Anopheles merus AMEM004753 I 0.885
PPAI010986 Phlebotomus papatasi PPAI010986 I 0.869
AAEL006167 Aedes aegypti AAEL006167 I 0.869
LCUP002659 Lucilia cuprina LCUP002659 I 0.838
MDOA009046 Musca domestica MDOA009046 I 0.831
run Drosophila erecta FBgn0085118 I 0.823
run Drosophila yakuba FBgn0084618 I 0.823
GF15970 Drosophila ananassae FBgn0092993 I 0.823
run Drosophila simulans FBgn0016352 I 0.823
GH17740 Drosophila grimshawi FBgn0125210 I 0.823
run Drosophila virilis FBgn0013920 I 0.823
run Drosophila pseudoobscura FBgn0013862 I 0.823
L798_10922 Zootermopsis nevadensis L798_10922 I 0.823
run Drosophila melanogaster FBgn0003300 D 0.823
GI15491 Drosophila mojavensis FBgn0138240 I 0.823
GK19815 Drosophila willistoni FBgn0221813 I 0.823
GL15806 Drosophila persimilis FBgn0153410 I 0.823
GM23050 Drosophila sechellia FBgn0177918 I 0.823
TC006542 Tribolium castaneum TC006542 I 0.815
PHUM333310 Pediculus humanus PHUM333310 I 0.808
GB52719 Apis mellifera GB52719 I 0.792
BGIBMGA008906 Bombyx mori BGIBMGA008906 I 0.785
NV17759 Nasonia vitripennis NV17759 I 0.777
MCINX005905 Melitaea cinxia MCINX005905 I 0.769
LDEC006645 Leptinotarsa decemlineata LDEC006645 I 0.769
MESCA003521 Megaselia scalaris MESCA003521 I 0.762
GD17495 Drosophila simulans FBgn0189047 I 0.754
Cflo_03910--XP_001121886.1_APIME Camponotus floridanus Cflo_03910--XP_001121886.1_APIME I 0.754
GH17737 Drosophila grimshawi FBgn0125207 I 0.754
RunxB Drosophila melanogaster FBgn0259162 I 0.754
TC005796 Tribolium castaneum TC005796 I 0.754
PHUM333300 Pediculus humanus PHUM333300 I 0.754
SINV13356 Solenopsis invicta SINV13356 I 0.754
GL15800 Drosophila persimilis FBgn0153404 I 0.754
KGM_21067 Danaus plexippus KGM_21067 I 0.754
GG19691 Drosophila erecta FBgn0111893 I 0.754
GK19810 Drosophila willistoni FBgn0221808 I 0.754
GA13742 Drosophila pseudoobscura FBgn0073778 I 0.754
GE17890 Drosophila yakuba FBgn0235328 I 0.754
CLEC011122 Cimex lectularius CLEC011122 I 0.754
GM23044 Drosophila sechellia FBgn0177912 I 0.754
GJ19245 Drosophila virilis FBgn0206390 I 0.754
GF15967 Drosophila ananassae FBgn0092990 I 0.754
PHUM333320 Pediculus humanus PHUM333320 I 0.746
NV17793 Nasonia vitripennis NV17793 I 0.731
AAEL006160 Aedes aegypti AAEL006160 I 0.731
TC006536 Tribolium castaneum TC006536 I 0.731
ACEP16410 Atta cephalotes ACEP16410 I 0.731
MDOA013149 Musca domestica MDOA013149 I 0.731
AAEL007040 Aedes aegypti AAEL007040 I 0.731
ASTEI07771 Anopheles stephensi ASTEI07771 I 0.731
AATE002063 Anopheles atroparvus AATE002063 I 0.731
Cflo_03911--XP_394014.2_APIME Camponotus floridanus Cflo_03911--XP_394014.2_APIME I 0.723
Cflo_03909--XP_394016.2_APIME Camponotus floridanus Cflo_03909--XP_394016.2_APIME I 0.723
ISCW004493 Ixodes scapularis ISCW004493 I 0.723
Hsal_12319--XP_394016.2_APIME Harpegnathos saltator Hsal_12319--XP_394016.2_APIME I 0.723
Sakowv30005496m.g Saccoglossus kowalevskii Sakowv30005496m.g I 0.723
KGM_21075 Danaus plexippus KGM_21075 I 0.723
TC005566 Tribolium castaneum TC005566 I 0.723
SINV13317 Solenopsis invicta SINV13317 I 0.723
ACYPI001442 Acyrthosiphon pisum ACYPI001442 I 0.715
Hsal_12321--XP_001121886.1_APIME Harpegnathos saltator Hsal_12321--XP_001121886.1_APIME I 0.715
PHUM333340 Pediculus humanus PHUM333340 I 0.715
GL15927 Drosophila persimilis FBgn0153531 I 0.715
GG17578 Drosophila erecta FBgn0109803 I 0.715
GF15983 Drosophila ananassae FBgn0093006 I 0.715
GI15119 Drosophila mojavensis FBgn0137869 I 0.715
GH17774 Drosophila grimshawi FBgn0125244 I 0.715
YQE_12218 Dendroctonus ponderosae YQE_12218 I 0.715
tetur01g02340 Tetranychus urticae tetur01g02340 I 0.715
RunxA Drosophila melanogaster FBgn0083981 I 0.715
NV10998 Nasonia vitripennis NV10998 I 0.715
GM22662 Drosophila sechellia FBgn0177532 I 0.715
MCINX000302 Melitaea cinxia MCINX000302 I 0.715
MDOA011942 Musca domestica MDOA011942 I 0.715
GE15340 Drosophila yakuba FBgn0232921 I 0.715
GK20052 Drosophila willistoni FBgn0222049 I 0.715
GB52761 Apis mellifera GB52761 I 0.715
GA25684 Drosophila pseudoobscura FBgn0247061 I 0.715
GB52721 Apis mellifera GB52721 I 0.715
GJ18917 Drosophila virilis FBgn0206063 I 0.715
AARA004356 Anopheles arabiensis AARA004356 I 0.708
AMEM017856 Anopheles merus AMEM017856 I 0.708
AMIN002518 Anopheles minimus AMIN002518 I 0.708
GB52718 Apis mellifera GB52718 I 0.708
ENSPSIG00000017547 Pelodiscus sinensis ENSPSIG00000017547 I 0.708
RUNX1 Dasypus novemcinctus ENSDNOG00000015041 I 0.708
AEPI003479 Anopheles epiroticus AEPI003479 I 0.708
ACHR004078 Anopheles christyi ACHR004078 I 0.708
RUNX1 Callithrix jacchus ENSCJAG00000002816 I 0.708
Hsal_12322--XP_394014.2_APIME Harpegnathos saltator Hsal_12322--XP_394014.2_APIME I 0.708
RUNX1 Homo sapiens ENSG00000159216 D 0.708
AALB009220 Anopheles albimanus AALB009220 I 0.708
GI14398 Drosophila mojavensis FBgn0137150 I 0.708
GJ18742 Drosophila virilis FBgn0205894 I 0.708
ASTEI07959 Anopheles stephensi ASTEI07959 I 0.708
RPRC005391 Rhodnius prolixus RPRC005391 I 0.708
Runx1 Mus musculus ENSMUSG00000022952 D 0.708
ACYPI007541 Acyrthosiphon pisum ACYPI007541 I 0.708
SINV13363 Solenopsis invicta SINV13363 I 0.708
RUNX1 Macaca mulatta ENSMMUG00000001649 I 0.708
AGAP002506 Anopheles gambiae AGAP002506 I 0.708
SPU_006917 Strongylocentrotus purpuratus SPU_006917 I 0.708
ENSFALG00000000025 Ficedula albicollis ENSFALG00000000025 I 0.700
ENSSHAG00000014782 Sarcophilus harrisii ENSSHAG00000014782 I 0.700
RUNX1 Tursiops truncatus ENSTTRG00000014160 I 0.700
RUNX1 Gallus gallus ENSGALG00000016022 I 0.700
RUNX1 Equus caballus ENSECAG00000003462 I 0.700
ENSSSCG00000012051 Sus scrofa ENSSSCG00000012051 I 0.700
ENSCSAG00000008703 Chlorocebus sabaeus ENSCSAG00000008703 I 0.700
ENSAMXG00000012244 Astyanax mexicanus ENSAMXG00000012244 I 0.700
ENSAMEG00000005325 Ailuropoda melanoleuca ENSAMEG00000005325 I 0.700
RUNX1 Canis familiaris ENSCAFG00000009596 I 0.700
RUNX1 Pteropus vampyrus ENSPVAG00000001606 I 0.700
Runx1 Rattus norvegicus ENSRNOG00000001704 I 0.700
Runx1 Dipodomys ordii ENSDORG00000004347 I 0.700
Ogr17914 Ophisaurus gracilis Ogr17914 I 0.700
RUNX1 Oryctolagus cuniculus ENSOCUG00000013731 I 0.700
ENSTSYG00000005097 Tarsius syrichta ENSTSYG00000005097 I 0.700
RUNX1 Otolemur garnettii ENSOGAG00000033362 I 0.700
ENSPANG00000007357 Papio anubis ENSPANG00000007357 I 0.700
Cflo_03913--XP_394013.3_APIME Camponotus floridanus Cflo_03913--XP_394013.3_APIME I 0.700
RUNX1 Monodelphis domestica ENSMODG00000021051 I 0.700
ENSNLEG00000004310 Nomascus leucogenys ENSNLEG00000004310 I 0.700
GK25373 Drosophila willistoni FBgn0227332 I 0.700
ENSMPUG00000001340 Mustela putorius furo ENSMPUG00000001340 I 0.700
LotgiG96224 Lottia gigantea LotgiG96224 I 0.700
NV11000 Nasonia vitripennis NV11000 I 0.700
Cmyd_10021516 Chelonia mydas Cmyd_10021516 I 0.700
Hsal_04635--XP_394013.3_APIME Harpegnathos saltator Hsal_04635--XP_394013.3_APIME I 0.700
XP_002939387 Xenopus tropicalis XP_002939387 I 0.700
XP_002939386 Xenopus tropicalis XP_002939386 I 0.700
XP_002939388 Xenopus tropicalis XP_002939388 I 0.700
AALB007752 Anopheles albimanus AALB007752 I 0.700
RUNX1 Loxodonta africana ENSLAFG00000004290 I 0.700
RUNX1 Pan troglodytes ENSPTRG00000013883 I 0.700
RUNX1 Microcebus murinus ENSMICG00000011998 I 0.700
Pvit_04762 Pogona vitticeps Pvit_04762 I 0.700
estExt_fgenesh2_kg.C_3770001 Branchiostoma floridae estExt_fgenesh2_kg.C_3770001 I 0.700
estExt_fgenesh2_kg.C_750001 Branchiostoma floridae estExt_fgenesh2_kg.C_750001 I 0.700
ENSPPYG00000011394 Pongo abelii ENSPPYG00000011394 I 0.700
RUNX1 Gorilla gorilla ENSGGOG00000012862 I 0.700