AAEL006160 (Aedes aegypti)
Runt

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00853 (Runt) IPR013524 AAEL006160 T319283_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
lz
M03964_2.00
Drosophila melanogaster
HRACCGCAAHM

KDTTGCGGTYD
SELEX
Nitta et al.(2015)
lz_1
0.792 0.792
lz
M03965_2.00
Drosophila melanogaster
HVACCRCARWAACCRCAV

BTGYGGTTWYTGYGGTBD
SELEX
Nitta et al.(2015)
lz_2
0.792 0.792
lz
M03966_2.00
Drosophila melanogaster
WRACCRCAWTAACCRCAA

TTGYGGTTAWTGYGGTYW
SELEX
Nitta et al.(2015)
lz_3
0.792 0.792
lz
M03967_2.00
Drosophila melanogaster
HRACCGCAAAACCRCAR

YTGYGGTTTTGCGGTYD
SELEX
Nitta et al.(2015)
lz_4
0.792 0.792
RUNX3
M03464_2.00
Homo sapiens
HRACCGCAAACCRCAN

NTGYGGTTTGCGGTYD
SELEX
Jolma et al.(2013)
RUNX3_1
0.777 0.777
RUNX3
M03465_2.00
Homo sapiens
WAACCRCARN

NYTGYGGTTW
SELEX
Jolma et al.(2013)
RUNX3_2
0.777 0.777
RUNX3
M03466_2.00
Homo sapiens
HDACCRCADWAACCRCRN

NYGYGGTTWHTGYGGTHD
SELEX
Jolma et al.(2013)
RUNX3_3
0.777 0.777
RUNX3
M03467_2.00
Homo sapiens
HRACCRCAAH

DTTGYGGTYD
SELEX
Jolma et al.(2013)
RUNX3_4
0.777 0.777
RUNX3
M02751_2.00
Homo sapiens
WACCRCAM

KTGYGGTW
SELEX
Jolma et al.(2010)
RUNX3_monomer
0.777 0.777
RUNX3
M05731_2.00
Homo sapiens
YWAACCGCAAAAACCGCARV

BYTGCGGTTTTTGCGGTTWR
SELEX
Yin et al.(2017)
RUNX3_FL_HT-SELEX
0.777 0.777
RUNX3
M09369_2.00
Homo sapiens
HAACCACARN

NYTGTGGTTD
Misc
Kulakovskiy et al.(2013)
RUNX3_HUMAN.H11MO.0.A
0.777 0.777
Runx3
M09374_2.00
Mus musculus
NHRACCACARVN

NBYTGTGGTYDN
Misc
Kulakovskiy et al.(2013)
RUNX3_MOUSE.H11MO.0.A
0.777 0.777
RUNX3
M11252_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML2_Q3_01
0.777 0.777
RUNX3
M11253_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML2_Q3
0.777 0.777
RUNX3
M11254_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML2_Q4
0.777 0.777
RUNX3
M05732_2.00
Homo sapiens
HWAACCACRAAAACCACRARN

NYTYGTGGTTTTYGTGGTTWD
SELEX
Yin et al.(2017)
RUNX3_FL_Methyl-HT-SELEX
0.777 0.777
Runx1
M08163_2.00
Mus musculus
HRRCCACARVN

NBYTGTGGYYD
ChIP-seq
Mathelier et al.(2014)
MA0002.2
0.769 0.769
RUNX1
M09371_2.00
Homo sapiens
NWAACCACARV

BYTGTGGTTWN
Misc
Kulakovskiy et al.(2013)
RUNX1_HUMAN.H11MO.0.A
0.769 0.769
Runx1
M09372_2.00
Mus musculus
VWRACCACARVV

BBYTGTGGTYWB
Misc
Kulakovskiy et al.(2013)
RUNX1_MOUSE.H11MO.0.A
0.769 0.769
RUNX1
M09632_2.00
Homo sapiens
HAACCACADV

BHTGTGGTTD
Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE29180
0.769 0.769
RUNX1
M09631_2.00
Homo sapiens
VCCACWTCCTBY

RVAGGAWGTGGB
Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE17954
0.769 0.769
Runx1
M09633_2.00
Mus musculus
NWAACCACAR

YTGTGGTTWN
Misc
Heinz et al.(2010)
HPC7-Runx1_GSE22178
0.769 0.769
RUNX1
M11258_2.00
Homo sapiens
ACCRCA

TGYGGT
Transfac
Matys et al.(2006)
V$AML1_01
0.769 0.769
RUNX1
M11259_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q4_01
0.769 0.769
RUNX1
M11260_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q4_02
0.769 0.769
RUNX1
M11261_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q4
0.769 0.769
RUNX1
M11262_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q5
0.769 0.769
RUNX1
M11263_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q6
0.769 0.769
Runx2
M01307_2.00
Mus musculus
NHDACCRCAN

NTGYGGTHDN
PBM
Lambert et al.(2019)
pTH9764
0.762 0.762
RUNX2
M03468_2.00
Homo sapiens
HRACCGCAAACCRCRD

HYGYGGTTTGCGGTYD
SELEX
Jolma et al.(2013)
RUNX2_1
0.762 0.762
RUNX2
M03469_2.00
Homo sapiens
HRACCRCADWWACCRCAD

HTGYGGTWWHTGYGGTYD
SELEX
Jolma et al.(2013)
RUNX2_2
0.762 0.762
RUNX2
M03470_2.00
Homo sapiens
WAACCRCAR

YTGYGGTTW
SELEX
Jolma et al.(2013)
RUNX2_3
0.762 0.762
RUNX2
M05733_2.00
Homo sapiens
NHRACCRCADWAACCRCAVN

NBTGYGGTTWHTGYGGTYDN
SELEX
Yin et al.(2017)
RUNX2_eDBD_HT-SELEX
0.762 0.762
RUNX2
M09370_2.00
Homo sapiens
MMHAACCACAVVMH

DKBBTGTGGTTDKK
Misc
Kulakovskiy et al.(2013)
RUNX2_HUMAN.H11MO.0.A
0.762 0.762
Runx2
M09373_2.00
Mus musculus
VWRACCACARVV

BBYTGTGGTYWB
Misc
Kulakovskiy et al.(2013)
RUNX2_MOUSE.H11MO.0.A
0.762 0.762
RUNX2
M09630_2.00
Homo sapiens
NHVACCACANNN

NNNTGTGGTBDN
Misc
Heinz et al.(2010)
PCa-RUNX2_GSE33889
0.762 0.762
RUNX2
M11255_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML3_Q3
0.762 0.762
RUNX2
M11256_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML3_Q6
0.762 0.762
RUNX2
M11257_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$OSF2_Q6
0.762 0.762
RUNX2
M05734_2.00
Homo sapiens
NWAACCACRAAAACCACRRN

NYYGTGGTTTTYGTGGTTWN
SELEX
Yin et al.(2017)
RUNX2_eDBD_Methyl-HT-SELEX
0.762 0.762
run
M06444_2.00
Drosophila melanogaster
WAACCGCAR

YTGCGGTTW
B1H
Zhu et al.(2011)
run_Bgb_NBT_FBgn0003300
0.738 0.738
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAEL006160-PA Runt 11 140

Links

Other Runt family TFs
Other Aedes aegypti TFs

390 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
SSLN_0001115101 Schistocephalus solidus SSLN_0001115101 I 0.000
BGLB007764 Biomphalaria glabrata BGLB007764 I 0.000
AMAM010937 Anopheles maculatus AMAM010937 I 0.000
LCUP015670 Lucilia cuprina LCUP015670 I 0.000
LCUP013028 Lucilia cuprina LCUP013028 I 0.000
CLEC008846 Cimex lectularius CLEC008846 I 0.000
AAC60302 Xenopus laevis AAC60302 I 0.000
Cflo_05394--XP_001120031.1_APIME Camponotus floridanus Cflo_05394--XP_001120031.1_APIME I 0.000
WBGene00241130 Onchocerca volvulus WBGene00241130 I 0.000
ACAC_0001290301 Angiostrongylus cantonensis ACAC_0001290301 I 0.000
ACOC_0000178201 Angiostrongylus costaricensis ACOC_0000178201 I 0.000
SCUD_0000535601 Schistosoma curassoni SCUD_0000535601 I 0.000
nOo.2.0.1.g04580 Onchocerca ochengi nOo.2.0.1.g04580 I 0.000
nDi.2.2.2.g03678 Dirofilaria immitis nDi.2.2.2.g03678 I 0.000
nAv.1.0.1.g05236 Acanthocheilonema viteae nAv.1.0.1.g05236 I 0.000
L898_g18055 Steinernema monticolum L898_g18055 I 0.000
L889_g28670 Steinernema feltiae L889_g28670 I 0.000
L596_g7168 Steinernema carpocapsae L596_g7168 I 0.000
ECANG7_07793 Echinococcus canadensis ECANG7_07793 I 0.000
LotgiG135549 Lottia gigantea LotgiG135549 I 0.000
HelroG124549 Helobdella robusta HelroG124549 I 0.000
GM13025 Drosophila sechellia FBgn0167956 I 0.000
CBG04481 Caenorhabditis briggsae CBG04481 I 0.000
Bm14693 Brugia malayi Bm14693 I 0.000
ACEP12359 Atta cephalotes ACEP12359 I 0.000
L596_g12356 Steinernema carpocapsae L596_g12356 I 0.000
pax2.L Xenopus laevis XB-GENE-486805 I 0.000
ENSLOCG00000012825 Lepisosteus oculatus ENSLOCG00000012825 I 0.000
pax6a Danio rerio ENSDARG00000103379 I 0.000
pax6b Danio rerio ENSDARG00000045936 I 0.000
DAPPUDRAFT_38922 Daphnia pulex DAPPUDRAFT_38922 I 0.000
PAX5 Anolis carolinensis ENSACAG00000011646 I 0.000
pax2a Danio rerio ENSDARG00000028148 I 0.000
pax5 Tetraodon nigroviridis ENSTNIG00000005085 I 0.000
Pax5 Rattus norvegicus ENSRNOG00000024729 I 0.000
ENSPFOG00000003702 Poecilia formosa ENSPFOG00000003702 I 0.000
PAX8 Ochotona princeps ENSOPRG00000012910 I 0.000
ENSONIG00000016065 Oreochromis niloticus ENSONIG00000016065 I 0.000
PAX8 Microcebus murinus ENSMICG00000003265 I 0.000
ENSLACG00000013159 Latimeria chalumnae ENSLACG00000013159 I 0.000
ENSGMOG00000000463 Gadus morhua ENSGMOG00000000463 I 0.000
SMTD_0001015101 Schistosoma mattheei SMTD_0001015101 N 0.000
TCLT_0000192601 Thelazia callipaeda TCLT_0000192601 N 0.000