ACEP16394 (Atta cephalotes)
Runt

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00853 (Runt) IPR013524 ACEP16394 T319288_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
lz
M03964_2.00 		Drosophila melanogaster
HRACCGCAAHM
KDTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_1 		0.786 0.786
lz
M03965_2.00 		Drosophila melanogaster
HVACCRCARWAACCRCAV
BTGYGGTTWYTGYGGTBD		 SELEX
Nitta et al.(2015)
lz_2 		0.786 0.786
lz
M03966_2.00 		Drosophila melanogaster
WRACCRCAWTAACCRCAA
TTGYGGTTAWTGYGGTYW		 SELEX
Nitta et al.(2015)
lz_3 		0.786 0.786
lz
M03967_2.00 		Drosophila melanogaster
HRACCGCAAAACCRCAR
YTGYGGTTTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_4 		0.786 0.786
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ACEP16394-PA Runt 3 44

Links

Other Runt family TFs
Other Atta cephalotes TFs

70 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cflo_03913--XP_394013.3_APIME Camponotus floridanus Cflo_03913--XP_394013.3_APIME I 0.905
Hsal_04635--XP_394013.3_APIME Harpegnathos saltator Hsal_04635--XP_394013.3_APIME I 0.905
NV10998 Nasonia vitripennis NV10998 I 0.881
AMAM011616 Anopheles maculatus AMAM011616 I 0.840
MCINX000302 Melitaea cinxia MCINX000302 I 0.810
ACYPI001442 Acyrthosiphon pisum ACYPI001442 I 0.810
TC005566 Tribolium castaneum TC005566 I 0.810
AALB007752 Anopheles albimanus AALB007752 I 0.800
PPAI006591 Phlebotomus papatasi PPAI006591 I 0.792
GM22478 Drosophila sechellia FBgn0177348 I 0.786
GD16951 Drosophila simulans FBgn0188530 I 0.786
GL16499 Drosophila persimilis FBgn0154103 I 0.786
GE17788 Drosophila yakuba FBgn0235232 I 0.786
tetur01g02340 Tetranychus urticae tetur01g02340 I 0.786
GA22609 Drosophila pseudoobscura FBgn0244012 I 0.786
GI14398 Drosophila mojavensis FBgn0137150 I 0.786
GK25373 Drosophila willistoni FBgn0227332 I 0.786
GJ18742 Drosophila virilis FBgn0205894 I 0.786
CpipJ_CPIJ016825 Culex pipiens CpipJ_CPIJ016825 I 0.786
AATE002063 Anopheles atroparvus AATE002063 I 0.786
ACUA008762 Anopheles culicifacies ACUA008762 I 0.786
ASTEI07771 Anopheles stephensi ASTEI07771 I 0.786
ACEP16400 Atta cephalotes ACEP16400 I 0.786
GG18309 Drosophila erecta FBgn0110525 I 0.786
LDEC020504 Leptinotarsa decemlineata LDEC020504 N 0.786
AAEL006160 Aedes aegypti AAEL006160 I 0.786
LCUP002647 Lucilia cuprina LCUP002647 I 0.786
CPIJ016825 Culex quinquefasciatus CPIJ016825 I 0.786
lz Drosophila melanogaster FBgn0002576 D 0.786
MESCA007078 Megaselia scalaris MESCA007078 I 0.784
Cflo_03911--XP_394014.2_APIME Camponotus floridanus Cflo_03911--XP_394014.2_APIME I 0.762
YQE_12218 Dendroctonus ponderosae YQE_12218 I 0.762
PHUM333340 Pediculus humanus PHUM333340 I 0.762
NV11000 Nasonia vitripennis NV11000 I 0.762
CapteG142159 Capitella teleta CapteG142159 I 0.762
ADAC004330 Anopheles darlingi ADAC004330 I 0.762
DAPPUDRAFT_290557 Daphnia pulex DAPPUDRAFT_290557 I 0.762
GB52761 Apis mellifera GB52761 I 0.762
ACYPI007541 Acyrthosiphon pisum ACYPI007541 I 0.738
KGM_21075 Danaus plexippus KGM_21075 I 0.738
RPRC005391 Rhodnius prolixus RPRC005391 I 0.738
HMEL009842 Heliconius melpomene HMEL009842 I 0.738
LLOJ002717 Lutzomyia longipalpis LLOJ002717 I 0.738
PPAI007797 Phlebotomus papatasi PPAI007797 I 0.738
ISCW004493 Ixodes scapularis ISCW004493 I 0.738
MDOA010744 Musca domestica MDOA010744 I 0.738
AFAF013225 Anopheles farauti AFAF013225 I 0.714
AEPI003479 Anopheles epiroticus AEPI003479 I 0.714
ACYPI006937 Acyrthosiphon pisum ACYPI006937 I 0.714
ACEP16410 Atta cephalotes ACEP16410 I 0.714
ACHR004078 Anopheles christyi ACHR004078 I 0.714
MDOA011942 Musca domestica MDOA011942 I 0.714
ASTEI07959 Anopheles stephensi ASTEI07959 I 0.714
AAEL007040 Aedes aegypti AAEL007040 I 0.714
AMIN002518 Anopheles minimus AMIN002518 I 0.714
AMEM017856 Anopheles merus AMEM017856 I 0.714
LCUP002656 Lucilia cuprina LCUP002656 I 0.714
TriadG25179 Trichoplax adhaerens TriadG25179 I 0.714
Cflo_03910--XP_001121886.1_APIME Camponotus floridanus Cflo_03910--XP_001121886.1_APIME I 0.714
TC006536 Tribolium castaneum TC006536 I 0.714
TC005796 Tribolium castaneum TC005796 I 0.714
SINV13405 Solenopsis invicta SINV13405 I 0.714
AARA004356 Anopheles arabiensis AARA004356 I 0.714
ENSAMXG00000000881 Astyanax mexicanus ENSAMXG00000000881 I 0.714
AGAP002506 Anopheles gambiae AGAP002506 I 0.714
CpipJ_CPIJ006373 Culex pipiens CpipJ_CPIJ006373 I 0.714
CPIJ006373 Culex quinquefasciatus CPIJ006373 I 0.714
CLEC011124 Cimex lectularius CLEC011124 I 0.714
PHUM333300 Pediculus humanus PHUM333300 I 0.714
ENSAPLG00000007026 Anas platyrhynchos ENSAPLG00000007026 I 0.711