ACEP16410 (Atta cephalotes)
Runt

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00853 (Runt) IPR013524 ACEP16410 T319293_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
run
M06444_2.00
Drosophila melanogaster
WAACCGCAR

YTGCGGTTW
B1H
Zhu et al.(2011)
run_Bgb_NBT_FBgn0003300
0.762 0.762
lz
M03964_2.00
Drosophila melanogaster
HRACCGCAAHM

KDTTGCGGTYD
SELEX
Nitta et al.(2015)
lz_1
0.715 0.715
lz
M03965_2.00
Drosophila melanogaster
HVACCRCARWAACCRCAV

BTGYGGTTWYTGYGGTBD
SELEX
Nitta et al.(2015)
lz_2
0.715 0.715
lz
M03966_2.00
Drosophila melanogaster
WRACCRCAWTAACCRCAA

TTGYGGTTAWTGYGGTYW
SELEX
Nitta et al.(2015)
lz_3
0.715 0.715
lz
M03967_2.00
Drosophila melanogaster
HRACCGCAAAACCRCAR

YTGYGGTTTTGCGGTYD
SELEX
Nitta et al.(2015)
lz_4
0.715 0.715
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ACEP16410-PA Runt 17 146

Links

Other Runt family TFs
Other Atta cephalotes TFs

180 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action