ENSGACG00000011721 (Gasterosteus aculeatus)
Runt

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00853 (Runt) IPR013524 ENSGACG00000011721 T319386_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Runx2
M01307_2.00
Mus musculus
NHDACCRCAN

NTGYGGTHDN
PBM
Lambert et al.(2019)
pTH9764
0.713 0.713
RUNX2
M03468_2.00
Homo sapiens
HRACCGCAAACCRCRD

HYGYGGTTTGCGGTYD
SELEX
Jolma et al.(2013)
RUNX2_1
0.713 0.713
RUNX2
M03469_2.00
Homo sapiens
HRACCRCADWWACCRCAD

HTGYGGTWWHTGYGGTYD
SELEX
Jolma et al.(2013)
RUNX2_2
0.713 0.713
RUNX2
M03470_2.00
Homo sapiens
WAACCRCAR

YTGYGGTTW
SELEX
Jolma et al.(2013)
RUNX2_3
0.713 0.713
RUNX2
M05733_2.00
Homo sapiens
NHRACCRCADWAACCRCAVN

NBTGYGGTTWHTGYGGTYDN
SELEX
Yin et al.(2017)
RUNX2_eDBD_HT-SELEX
0.713 0.713
Runx1
M08163_2.00
Mus musculus
HRRCCACARVN

NBYTGTGGYYD
ChIP-seq
Mathelier et al.(2014)
MA0002.2
0.713 0.713
RUNX1
M09371_2.00
Homo sapiens
NWAACCACARV

BYTGTGGTTWN
Misc
Kulakovskiy et al.(2013)
RUNX1_HUMAN.H11MO.0.A
0.713 0.713
RUNX2
M09370_2.00
Homo sapiens
MMHAACCACAVVMH

DKBBTGTGGTTDKK
Misc
Kulakovskiy et al.(2013)
RUNX2_HUMAN.H11MO.0.A
0.713 0.713
Runx1
M09372_2.00
Mus musculus
VWRACCACARVV

BBYTGTGGTYWB
Misc
Kulakovskiy et al.(2013)
RUNX1_MOUSE.H11MO.0.A
0.713 0.713
Runx2
M09373_2.00
Mus musculus
VWRACCACARVV

BBYTGTGGTYWB
Misc
Kulakovskiy et al.(2013)
RUNX2_MOUSE.H11MO.0.A
0.713 0.713
RUNX1
M09632_2.00
Homo sapiens
HAACCACADV

BHTGTGGTTD
Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE29180
0.713 0.713
RUNX1
M09631_2.00
Homo sapiens
VCCACWTCCTBY

RVAGGAWGTGGB
Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE17954
0.713 0.713
RUNX2
M09630_2.00
Homo sapiens
NHVACCACANNN

NNNTGTGGTBDN
Misc
Heinz et al.(2010)
PCa-RUNX2_GSE33889
0.713 0.713
Runx1
M09633_2.00
Mus musculus
NWAACCACAR

YTGTGGTTWN
Misc
Heinz et al.(2010)
HPC7-Runx1_GSE22178
0.713 0.713
RUNX1
M11258_2.00
Homo sapiens
ACCRCA

TGYGGT
Transfac
Matys et al.(2006)
V$AML1_01
0.713 0.713
RUNX1
M11259_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q4_01
0.713 0.713
RUNX1
M11260_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q4_02
0.713 0.713
RUNX1
M11261_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q4
0.713 0.713
RUNX1
M11262_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q5
0.713 0.713
RUNX1
M11263_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q6
0.713 0.713
RUNX2
M11255_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML3_Q3
0.713 0.713
RUNX2
M11256_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML3_Q6
0.713 0.713
RUNX2
M11257_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$OSF2_Q6
0.713 0.713
RUNX2
M05734_2.00
Homo sapiens
NWAACCACRAAAACCACRRN

NYYGTGGTTTTYGTGGTTWN
SELEX
Yin et al.(2017)
RUNX2_eDBD_Methyl-HT-SELEX
0.713 0.713
RUNX3
M03464_2.00
Homo sapiens
HRACCGCAAACCRCAN

NTGYGGTTTGCGGTYD
SELEX
Jolma et al.(2013)
RUNX3_1
0.705 0.705
RUNX3
M03465_2.00
Homo sapiens
WAACCRCARN

NYTGYGGTTW
SELEX
Jolma et al.(2013)
RUNX3_2
0.705 0.705
RUNX3
M03466_2.00
Homo sapiens
HDACCRCADWAACCRCRN

NYGYGGTTWHTGYGGTHD
SELEX
Jolma et al.(2013)
RUNX3_3
0.705 0.705
RUNX3
M03467_2.00
Homo sapiens
HRACCRCAAH

DTTGYGGTYD
SELEX
Jolma et al.(2013)
RUNX3_4
0.705 0.705
RUNX3
M02751_2.00
Homo sapiens
WACCRCAM

KTGYGGTW
SELEX
Jolma et al.(2010)
RUNX3_monomer
0.705 0.705
RUNX3
M05731_2.00
Homo sapiens
YWAACCGCAAAAACCGCARV

BYTGCGGTTTTTGCGGTTWR
SELEX
Yin et al.(2017)
RUNX3_FL_HT-SELEX
0.705 0.705
RUNX3
M09369_2.00
Homo sapiens
HAACCACARN

NYTGTGGTTD
Misc
Kulakovskiy et al.(2013)
RUNX3_HUMAN.H11MO.0.A
0.705 0.705
Runx3
M09374_2.00
Mus musculus
NHRACCACARVN

NBYTGTGGTYDN
Misc
Kulakovskiy et al.(2013)
RUNX3_MOUSE.H11MO.0.A
0.705 0.705
RUNX3
M11252_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML2_Q3_01
0.705 0.705
RUNX3
M11253_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML2_Q3
0.705 0.705
RUNX3
M11254_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML2_Q4
0.705 0.705
RUNX3
M05732_2.00
Homo sapiens
HWAACCACRAAAACCACRARN

NYTYGTGGTTTTYGTGGTTWD
SELEX
Yin et al.(2017)
RUNX3_FL_Methyl-HT-SELEX
0.705 0.705
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGACP00000015505 Runt 42 171

Links

Other Runt family TFs
Other Gasterosteus aculeatus TFs

170 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aan_R005895 Calypte anna Aan_R005895 I 0.756
Aan_R007315 Calypte anna Aan_R007315 I 0.756
Afo_R004888 Aptenodytes forsteri Afo_R004888 I 0.756
Afo_R008955 Aptenodytes forsteri Afo_R008955 I 0.750
Alligator_sinensis_CCG001676.1 Alligator sinensis Alligator_sinensis_CCG001676.1 I 0.713
Alligator_sinensis_CCG010991.1 Alligator sinensis Alligator_sinensis_CCG010991.1 I 0.733
Brh_R000794 Buceros rhinoceros Brh_R000794 I 0.758
Brh_R001637 Buceros rhinoceros Brh_R001637 I 0.756
Cmyd_10020455 Chelonia mydas Cmyd_10020455 I 0.715
Cmyd_10020845 Chelonia mydas Cmyd_10020845 I 0.700
Cmyd_10021516 Chelonia mydas Cmyd_10021516 I 0.708
ENSAMEG00000005325 Ailuropoda melanoleuca ENSAMEG00000005325 I 0.708
ENSAMEG00000009223 Ailuropoda melanoleuca ENSAMEG00000009223 I 0.756
ENSAMEG00000010102 Ailuropoda melanoleuca ENSAMEG00000010102 I 0.700
ENSAMXG00000000881 Astyanax mexicanus ENSAMXG00000000881 I 0.708
ENSAMXG00000004048 Astyanax mexicanus ENSAMXG00000004048 I 0.700
ENSAMXG00000017349 Astyanax mexicanus ENSAMXG00000017349 I 0.700
ENSAPLG00000007026 Anas platyrhynchos ENSAPLG00000007026 I 0.711
ENSAPLG00000011653 Anas platyrhynchos ENSAPLG00000011653 I 0.758
ENSAPLG00000016439 Anas platyrhynchos ENSAPLG00000016439 I 0.700
ENSBTAP00000006227-D1 Bos grunniens ENSBTAP00000006227-D1 I 0.756
ENSCAFG00000031052 Canis familiaris ENSCAFG00000031052 I 0.733
ENSCING00000002253 Ciona intestinalis ENSCING00000002253 I 0.707
ENSCPOG00000000551 Cavia porcellus ENSCPOG00000000551 I 0.700
ENSCPOG00000002684 Cavia porcellus ENSCPOG00000002684 I 0.700
ENSCSAG00000000947 Chlorocebus sabaeus ENSCSAG00000000947 I 0.700
ENSCSAG00000008703 Chlorocebus sabaeus ENSCSAG00000008703 I 0.708
ENSCSAG00000012528 Chlorocebus sabaeus ENSCSAG00000012528 I 0.708
ENSFALG00000000025 Ficedula albicollis ENSFALG00000000025 I 0.708
ENSFALG00000000470 Ficedula albicollis ENSFALG00000000470 I 0.700
ENSFALG00000001493 Ficedula albicollis ENSFALG00000001493 I 0.722
ENSFCAG00000029032 Felis catus ENSFCAG00000029032 I 0.769
ENSGALG00000026821 Gallus gallus ENSGALG00000026821 I 0.700
ENSGMOG00000000378 Gadus morhua ENSGMOG00000000378 N 0.829
ENSGMOG00000010468 Gadus morhua ENSGMOG00000010468 I 0.700
ENSGMOG00000014088 Gadus morhua ENSGMOG00000014088 I 0.708
ENSGMOG00000019132 Gadus morhua ENSGMOG00000019132 I 0.700
ENSLACG00000011545 Latimeria chalumnae ENSLACG00000011545 I 0.708
ENSLACG00000015930 Latimeria chalumnae ENSLACG00000015930 I 0.700
ENSLOCG00000002744 Lepisosteus oculatus ENSLOCG00000002744 I 0.700
ENSLOCG00000010990 Lepisosteus oculatus ENSLOCG00000010990 I 0.700
ENSLOCG00000015816 Lepisosteus oculatus ENSLOCG00000015816 I 0.708
ENSMGAG00000002035 Meleagris gallopavo ENSMGAG00000002035 I 0.711
ENSMGAG00000014534 Meleagris gallopavo ENSMGAG00000014534 I 0.756
ENSMODG00000013941 Monodelphis domestica ENSMODG00000013941 I 0.700
ENSMPUG00000001340 Mustela putorius furo ENSMPUG00000001340 I 0.708
ENSMPUG00000015804 Mustela putorius furo ENSMPUG00000015804 I 0.769
ENSNLEG00000004310 Nomascus leucogenys ENSNLEG00000004310 I 0.708
ENSNLEG00000009021 Nomascus leucogenys ENSNLEG00000009021 I 0.747
ENSOANG00000031074 Ornithorhynchus anatinus ENSOANG00000031074 I 0.720
ENSOCUG00000011739 Oryctolagus cuniculus ENSOCUG00000011739 I 0.756
ENSONIG00000001025 Oreochromis niloticus ENSONIG00000001025 I 0.700
ENSONIG00000001436 Oreochromis niloticus ENSONIG00000001436 I 0.885
ENSONIG00000008210 Oreochromis niloticus ENSONIG00000008210 I 0.700
ENSOPRG00000000765 Ochotona princeps ENSOPRG00000000765 I 0.705
ENSORLG00000018584 Oryzias latipes ENSORLG00000018584 I 0.885
ENSP00000300305 Macaca fascicularis ENSP00000300305 I 0.700
ENSP00000409227-D1 Bos grunniens ENSP00000409227-D1 I 0.708
ENSPANG00000006186 Papio anubis ENSPANG00000006186 I 0.708
ENSPANG00000007357 Papio anubis ENSPANG00000007357 I 0.708
ENSPANG00000008140 Papio anubis ENSPANG00000008140 I 0.700
ENSPFOG00000003997 Poecilia formosa ENSPFOG00000003997 I 0.700
ENSPFOG00000013752 Poecilia formosa ENSPFOG00000013752 I 0.846
ENSPFOG00000016115 Poecilia formosa ENSPFOG00000016115 I 0.700
ENSPPYG00000001714 Pongo abelii ENSPPYG00000001714 I 0.713
ENSPPYG00000011394 Pongo abelii ENSPPYG00000011394 I 0.708
ENSPPYG00000016664 Pongo abelii ENSPPYG00000016664 I 0.708
ENSPSIG00000014293 Pelodiscus sinensis ENSPSIG00000014293 I 0.750
ENSPSIG00000017547 Pelodiscus sinensis ENSPSIG00000017547 I 0.708
ENSSHAG00000009950 Sarcophilus harrisii ENSSHAG00000009950 I 0.708
ENSSHAG00000012559 Sarcophilus harrisii ENSSHAG00000012559 I 0.756
ENSSHAG00000014782 Sarcophilus harrisii ENSSHAG00000014782 I 0.705
ENSSSCG00000012051 Sus scrofa ENSSSCG00000012051 I 0.708
ENSSSCG00000025551 Sus scrofa ENSSSCG00000025551 I 0.737
ENSSTOG00000010163 Ictidomys tridecemlineatus ENSSTOG00000010163 I 0.708
ENSSTOG00000020082 Ictidomys tridecemlineatus ENSSTOG00000020082 I 0.719
ENSSTOG00000022471 Ictidomys tridecemlineatus ENSSTOG00000022471 I 0.700
ENSTNIG00000009855 Tetraodon nigroviridis ENSTNIG00000009855 I 0.791
ENSTSYG00000005097 Tarsius syrichta ENSTSYG00000005097 I 0.700
ENSXMAG00000003400 Xiphophorus maculatus ENSXMAG00000003400 I 0.700
ENSXMAG00000006715 Xiphophorus maculatus ENSXMAG00000006715 I 0.869
ENSXMAG00000018835 Xiphophorus maculatus ENSXMAG00000018835 I 0.700
frrunt Takifugu rubripes ENSTRUG00000006274 N 0.823
Gfo_R011596 Geospiza fortis Gfo_R011596 I 0.719
Gfo_R013848 Geospiza fortis Gfo_R013848 I 0.711
Myotis_brandtii_RUNX2_10026084 Myotis brandtii Myotis_brandtii_RUNX2_10026084 I 0.708
Ogr17914 Ophisaurus gracilis Ogr17914 I 0.708
Pvit_01165 Pogona vitticeps Pvit_01165 I 0.715
Pvit_04762 Pogona vitticeps Pvit_04762 I 0.708
Pvit_17193 Pogona vitticeps Pvit_17193 I 0.700
RUNX1 Pan troglodytes ENSPTRG00000013883 I 0.708
RUNX1 Pteropus vampyrus ENSPVAG00000001606 I 0.705
RUNX1 Procavia capensis ENSPCAG00000016747 I 0.715
Runx1 Rattus norvegicus ENSRNOG00000001704 I 0.708
RUNX1 Otolemur garnettii ENSOGAG00000033362 I 0.708
RUNX1 Gorilla gorilla ENSGGOG00000012862 I 0.708
RUNX1 Gallus gallus ENSGALG00000016022 I 0.708
RUNX1 Equus caballus ENSECAG00000003462 I 0.700
Runx1 Dipodomys ordii ENSDORG00000004347 I 0.708
RUNX1 Dasypus novemcinctus ENSDNOG00000015041 I 0.705
RUNX1 Canis familiaris ENSCAFG00000009596 I 0.708
RUNX1 Callithrix jacchus ENSCJAG00000002816 I 0.747
RUNX1 Bos taurus ENSBTAG00000004742 I 0.708
RUNX1 Loxodonta africana ENSLAFG00000004290 I 0.708
RUNX1 Homo sapiens ENSG00000159216 D 0.708
RUNX1 Oryctolagus cuniculus ENSOCUG00000013731 I 0.708
Runx1 Mus musculus ENSMUSG00000022952 D 0.710
RUNX1 Monodelphis domestica ENSMODG00000021051 I 0.705
RUNX1 Tursiops truncatus ENSTTRG00000014160 I 0.705
RUNX1 Macaca mulatta ENSMMUG00000001649 I 0.747
RUNX1 Microcebus murinus ENSMICG00000011998 I 0.708
runx1.L Xenopus laevis XB-GENE-864949 I 0.700
RUNX2 Tursiops truncatus ENSTTRG00000006943 I 0.708
RUNX2 Taeniopygia guttata ENSTGUG00000013249 I 0.715
runx2 Takifugu rubripes ENSTRUG00000003501 I 0.700
RUNX2 Tupaia belangeri ENSTBEG00000000948 I 0.756
runx2 Oryzias latipes ENSORLG00000010169 I 0.700
RUNX2 Meleagris gallopavo ENSMGAG00000014267 I 0.758
RUNX2 Equus caballus ENSECAG00000020875 I 0.709
RUNX2 Felis catus ENSFCAG00000022480 I 0.756
RUNX2 Ornithorhynchus anatinus ENSOANG00000008265 I 0.756
RUNX2 Homo sapiens ENSG00000124813 D 0.708
Runx2 Mus musculus ENSMUSG00000039153 D 0.708
RUNX2 Monodelphis domestica ENSMODG00000018912 I 0.708
RUNX2 Macaca mulatta ENSMMUG00000019819 I 0.708
RUNX2 Gorilla gorilla ENSGGOG00000012890 I 0.708
RUNX2 Myotis lucifugus ENSMLUG00000000514 I 0.756
RUNX2 Dasypus novemcinctus ENSDNOG00000034361 I 0.708
RUNX2 Otolemur garnettii ENSOGAG00000003900 I 0.708
Runx2 Rattus norvegicus ENSRNOG00000020193 I 0.708
RUNX2 Pan troglodytes ENSPTRG00000018228 I 0.708
RUNX2 Bos taurus ENSBTAG00000004104 I 0.708
RUNX2 Anolis carolinensis ENSACAG00000013003 I 0.715
RUNX2 Erinaceus europaeus ENSEEUG00000009243 I 0.708
RUNX2 Cavia porcellus ENSCPOG00000005277 I 0.708
RUNX2 Ochotona princeps ENSOPRG00000002943 I 0.708
RUNX2 Loxodonta africana ENSLAFG00000005054 I 0.756
runx2.L Xenopus laevis XB-GENE-864817 I 0.700
runx2a Danio rerio ENSDARG00000040261 I 0.721
runx2b Tetraodon nigroviridis ENSTNIG00000009685 I 0.700
runx2b Danio rerio ENSDARG00000059233 I 0.718
RUNX3 Loxodonta africana ENSLAFG00000008382 I 0.700
RUNX3 Otolemur garnettii ENSOGAG00000025633 I 0.700
RUNX3 Ochotona princeps ENSOPRG00000011273 I 0.700
runx3 Oryzias latipes ENSORLG00000017515 I 0.700
RUNX3 Callithrix jacchus ENSCJAG00000020815 I 0.715
RUNX3 Canis familiaris ENSCAFG00000012903 I 0.700
RUNX3 Bos taurus ENSBTAG00000019800 I 0.747
RUNX3 Oryctolagus cuniculus ENSOCUG00000017751 I 0.700
runx3 Xenopus tropicalis XB-GENE-487784 I 0.708
RUNX3 Pan troglodytes ENSPTRG00000000351 I 0.700
RUNX3 Anolis carolinensis ENSACAG00000017855 I 0.739
runx3 Danio rerio ENSDARG00000052826 I 0.700
RUNX3 Taeniopygia guttata ENSTGUG00000001130 I 0.700
Runx3 Rattus norvegicus ENSRNOG00000054217 I 0.700
runx3 Gasterosteus aculeatus ENSGACG00000007301 I 0.700
RUNX3 Macaca mulatta ENSMMUG00000002420 I 0.700
Runx3 Mus musculus ENSMUSG00000070691 D 0.700
RUNX3 Homo sapiens ENSG00000020633 D 0.700
runx3 Takifugu rubripes ENSTRUG00000001517 I 0.700
RUNX3 Felis catus ENSFCAG00000000680 I 0.700
RUNX3 Gorilla gorilla ENSGGOG00000004848 I 0.700
runx3 Tetraodon nigroviridis ENSTNIG00000016911 I 0.700
RUNX3 Dasypus novemcinctus ENSDNOG00000043493 I 0.700
RUNX3 Tursiops truncatus ENSTTRG00000009396 I 0.700
runx3.L Xenopus laevis XB-GENE-6487158 I 0.700
Tal_R011874 Tyto alba Tal_R011874 I 0.758
XP_002939386 Xenopus tropicalis XP_002939386 I 0.708
XP_002939387 Xenopus tropicalis XP_002939387 I 0.708
XP_002939388 Xenopus tropicalis XP_002939388 I 0.708