ENSNLEG00000009021 (Nomascus leucogenys)
Runt

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00853 (Runt) IPR013524 ENSNLEG00000009021 T319433_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RUNX3
M03464_2.00
Homo sapiens
HRACCGCAAACCRCAN

NTGYGGTTTGCGGTYD
SELEX
Jolma et al.(2013)
RUNX3_1
0.989 0.989
RUNX3
M03465_2.00
Homo sapiens
WAACCRCARN

NYTGYGGTTW
SELEX
Jolma et al.(2013)
RUNX3_2
0.989 0.989
RUNX3
M03466_2.00
Homo sapiens
HDACCRCADWAACCRCRN

NYGYGGTTWHTGYGGTHD
SELEX
Jolma et al.(2013)
RUNX3_3
0.989 0.989
RUNX3
M03467_2.00
Homo sapiens
HRACCRCAAH

DTTGYGGTYD
SELEX
Jolma et al.(2013)
RUNX3_4
0.989 0.989
RUNX3
M02751_2.00
Homo sapiens
WACCRCAM

KTGYGGTW
SELEX
Jolma et al.(2010)
RUNX3_monomer
0.989 0.989
RUNX3
M05731_2.00
Homo sapiens
YWAACCGCAAAAACCGCARV

BYTGCGGTTTTTGCGGTTWR
SELEX
Yin et al.(2017)
RUNX3_FL_HT-SELEX
0.989 0.989
RUNX3
M09369_2.00
Homo sapiens
HAACCACARN

NYTGTGGTTD
Misc
Kulakovskiy et al.(2013)
RUNX3_HUMAN.H11MO.0.A
0.989 0.989
Runx3
M09374_2.00
Mus musculus
NHRACCACARVN

NBYTGTGGTYDN
Misc
Kulakovskiy et al.(2013)
RUNX3_MOUSE.H11MO.0.A
0.989 0.989
RUNX3
M11252_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML2_Q3_01
0.989 0.989
RUNX3
M11253_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML2_Q3
0.989 0.989
RUNX3
M11254_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML2_Q4
0.989 0.989
RUNX3
M05732_2.00
Homo sapiens
HWAACCACRAAAACCACRARN

NYTYGTGGTTTTYGTGGTTWD
SELEX
Yin et al.(2017)
RUNX3_FL_Methyl-HT-SELEX
0.989 0.989
Runx2
M01307_2.00
Mus musculus
NHDACCRCAN

NTGYGGTHDN
PBM
Lambert et al.(2019)
pTH9764
0.967 0.967
RUNX2
M03468_2.00
Homo sapiens
HRACCGCAAACCRCRD

HYGYGGTTTGCGGTYD
SELEX
Jolma et al.(2013)
RUNX2_1
0.967 0.967
RUNX2
M03469_2.00
Homo sapiens
HRACCRCADWWACCRCAD

HTGYGGTWWHTGYGGTYD
SELEX
Jolma et al.(2013)
RUNX2_2
0.967 0.967
RUNX2
M03470_2.00
Homo sapiens
WAACCRCAR

YTGYGGTTW
SELEX
Jolma et al.(2013)
RUNX2_3
0.967 0.967
RUNX2
M05733_2.00
Homo sapiens
NHRACCRCADWAACCRCAVN

NBTGYGGTTWHTGYGGTYDN
SELEX
Yin et al.(2017)
RUNX2_eDBD_HT-SELEX
0.967 0.967
RUNX2
M09370_2.00
Homo sapiens
MMHAACCACAVVMH

DKBBTGTGGTTDKK
Misc
Kulakovskiy et al.(2013)
RUNX2_HUMAN.H11MO.0.A
0.967 0.967
Runx2
M09373_2.00
Mus musculus
VWRACCACARVV

BBYTGTGGTYWB
Misc
Kulakovskiy et al.(2013)
RUNX2_MOUSE.H11MO.0.A
0.967 0.967
RUNX2
M09630_2.00
Homo sapiens
NHVACCACANNN

NNNTGTGGTBDN
Misc
Heinz et al.(2010)
PCa-RUNX2_GSE33889
0.967 0.967
RUNX2
M11255_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML3_Q3
0.967 0.967
RUNX2
M11256_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML3_Q6
0.967 0.967
RUNX2
M11257_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$OSF2_Q6
0.967 0.967
RUNX2
M05734_2.00
Homo sapiens
NWAACCACRAAAACCACRRN

NYYGTGGTTTTYGTGGTTWN
SELEX
Yin et al.(2017)
RUNX2_eDBD_Methyl-HT-SELEX
0.967 0.967
Runx1
M08163_2.00
Mus musculus
HRRCCACARVN

NBYTGTGGYYD
ChIP-seq
Mathelier et al.(2014)
MA0002.2
0.934 0.934
RUNX1
M09371_2.00
Homo sapiens
NWAACCACARV

BYTGTGGTTWN
Misc
Kulakovskiy et al.(2013)
RUNX1_HUMAN.H11MO.0.A
0.934 0.934
Runx1
M09372_2.00
Mus musculus
VWRACCACARVV

BBYTGTGGTYWB
Misc
Kulakovskiy et al.(2013)
RUNX1_MOUSE.H11MO.0.A
0.934 0.934
RUNX1
M09632_2.00
Homo sapiens
HAACCACADV

BHTGTGGTTD
Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE29180
0.934 0.934
RUNX1
M09631_2.00
Homo sapiens
VCCACWTCCTBY

RVAGGAWGTGGB
Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE17954
0.934 0.934
Runx1
M09633_2.00
Mus musculus
NWAACCACAR

YTGTGGTTWN
Misc
Heinz et al.(2010)
HPC7-Runx1_GSE22178
0.934 0.934
RUNX1
M11258_2.00
Homo sapiens
ACCRCA

TGYGGT
Transfac
Matys et al.(2006)
V$AML1_01
0.934 0.934
RUNX1
M11259_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q4_01
0.934 0.934
RUNX1
M11260_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q4_02
0.934 0.934
RUNX1
M11261_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q4
0.934 0.934
RUNX1
M11262_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q5
0.934 0.934
RUNX1
M11263_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q6
0.934 0.934
lz
M03964_2.00
Drosophila melanogaster
HRACCGCAAHM

KDTTGCGGTYD
SELEX
Nitta et al.(2015)
lz_1
0.747 0.747
lz
M03965_2.00
Drosophila melanogaster
HVACCRCARWAACCRCAV

BTGYGGTTWYTGYGGTBD
SELEX
Nitta et al.(2015)
lz_2
0.747 0.747
lz
M03966_2.00
Drosophila melanogaster
WRACCRCAWTAACCRCAA

TTGYGGTTAWTGYGGTYW
SELEX
Nitta et al.(2015)
lz_3
0.747 0.747
lz
M03967_2.00
Drosophila melanogaster
HRACCGCAAAACCRCAR

YTGYGGTTTTGCGGTYD
SELEX
Nitta et al.(2015)
lz_4
0.747 0.747
run
M06444_2.00
Drosophila melanogaster
WAACCGCAR

YTGCGGTTW
B1H
Zhu et al.(2011)
run_Bgb_NBT_FBgn0003300
0.714 0.714
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSNLEP00000010988 Runt 1 91

Links

Other Runt family TFs
Other Nomascus leucogenys TFs

183 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
28641.m000082 Ricinus communis 28641.m000082 I 0.000
30169.m006542 Ricinus communis 30169.m006542 I 0.000
AMTR_s00097p00165740 Amborella trichopoda AMTR_s00097p00165740 I 0.000
Aquca_037_00045 Aquilegia coerulea Aquca_037_00045 I 0.000
BGIOSGA009571 Oryza indica BGIOSGA009571 I 0.000
Bo2g045930 Brassica oleracea Bo2g045930 I 0.000
Bo3g022760 Brassica oleracea Bo3g022760 I 0.000
Bo3g045150 Brassica oleracea Bo3g045150 I 0.000
Bo9g111050 Brassica oleracea Bo9g111050 I 0.000
Bostr.25463s0212 Boechera stricta Bostr.25463s0212 I 0.000
Bostr.26833s0952 Boechera stricta Bostr.26833s0952 I 0.000
Bostr.7867s0178 Boechera stricta Bostr.7867s0178 I 0.000
Bostr.7867s0626 Boechera stricta Bostr.7867s0626 I 0.000
Bra003068 Brassica rapa Bra003068 I 0.000
Bra022643 Brassica rapa Bra022643 I 0.000
Bra029079 Brassica rapa Bra029079 I 0.000
Cagra.0084s0074 Capsella grandiflora Cagra.0084s0074 I 0.000
Cagra.1225s0103 Capsella grandiflora Cagra.1225s0103 I 0.000
Cagra.1226s0039 Capsella grandiflora Cagra.1226s0039 I 0.000
Cagra.16778s0005 Capsella grandiflora Cagra.16778s0005 I 0.000
Carubv10001539m.g Capsella rubella Carubv10001539m.g I 0.000
Carubv10005160m.g Capsella rubella Carubv10005160m.g I 0.000
Carubv10005229m.g Capsella rubella Carubv10005229m.g I 0.000
Carubv10026682m.g Capsella rubella Carubv10026682m.g I 0.000
cassava27467.m1 Manihot esculenta cassava27467.m1 I 0.000
cassava32471.m1 Manihot esculenta cassava32471.m1 I 0.000
cassava7228.valid.m1 Manihot esculenta cassava7228.valid.m1 I 0.000
Ca_03948 Cicer arietinum Ca_03948 I 0.000
Ca_08911 Cicer arietinum Ca_08911 N 0.000
Ca_08913 Cicer arietinum Ca_08913 N 0.000
Ca_15671 Cicer arietinum Ca_15671 I 0.000
chr2.CM0060.150.nc Lotus japonicus chr2.CM0060.150.nc I 0.000
Ciclev10002183m.g Citrus clementina Ciclev10002183m.g I 0.000
Ciclev10005220m.g Citrus clementina Ciclev10005220m.g I 0.000
Cla004291 Citrullus lanatus Cla004291 I 0.000
Cla011108 Citrullus lanatus Cla011108 I 0.000
Cla013632 Citrullus lanatus Cla013632 I 0.000
CRF1 Arabidopsis lyrata fgenesh2_kg.6__3086__AT4G11140.1 I 0.000
CRF1 Arabidopsis thaliana AT4G11140 I 0.000
CRF2 Arabidopsis thaliana AT4G23750 D 0.000
CRF2 Arabidopsis lyrata fgenesh2_kg.7__1924__AT4G23750.1 I 0.000
CRF3 Arabidopsis thaliana AT5G53290 D 0.000
CRF3 Arabidopsis lyrata scaffold_801806.1 I 0.000
CRF4 Arabidopsis lyrata scaffold_701473.1 I 0.000
CRF4 Arabidopsis thaliana AT4G27950 D 0.000
Cucsa.012850 Cucumis sativus Cucsa.012850 I 0.000
Cucsa.107190 Cucumis sativus Cucsa.107190 I 0.000
Eucgr.A02669 Eucalyptus grandis Eucgr.A02669 I 0.000
Eucgr.K00321 Eucalyptus grandis Eucgr.K00321 I 0.000
evm.TU.supercontig_2.277 Carica papaya evm.TU.supercontig_2.277 I 0.000
gene13118-v1.0-hybrid Fragaria vesca gene13118-v1.0-hybrid I 0.000
GLYMA01G43350 Glycine max GLYMA01G43350 I 0.000
GLYMA02G40320 Glycine max GLYMA02G40320 I 0.000
GLYMA03G23330 Glycine max GLYMA03G23330 I 0.000
GLYMA04G41740 Glycine max GLYMA04G41740 I 0.000
GLYMA06G13040 Glycine max GLYMA06G13040 I 0.000
GLYMA08G02460 Glycine max GLYMA08G02460 I 0.000
GLYMA11G02140 Glycine max GLYMA11G02140 I 0.000
GLYMA20G33840 Glycine max GLYMA20G33840 I 0.000
Gorai.001G156900 Gossypium raimondii Gorai.001G156900 I 0.000
Gorai.006G200400 Gossypium raimondii Gorai.006G200400 I 0.000
Gorai.006G208200 Gossypium raimondii Gorai.006G208200 I 0.000
Gorai.007G105600 Gossypium raimondii Gorai.007G105600 I 0.000
Gorai.007G105700 Gossypium raimondii Gorai.007G105700 I 0.000
Gorai.008G271200 Gossypium raimondii Gorai.008G271200 I 0.000
Gorai.009G355700 Gossypium raimondii Gorai.009G355700 I 0.000
GSMUA_Achr11G19880_001 Musa acuminata GSMUA_Achr11G19880_001 I 0.000
GSMUA_Achr7G21980_001 Musa acuminata GSMUA_Achr7G21980_001 I 0.000
LjSGA_008718.1 Lotus japonicus LjSGA_008718.1 I 0.000
Lus10027573.g Linum usitatissimum Lus10027573.g I 0.000
Lus10039324.g Linum usitatissimum Lus10039324.g I 0.000
MDP0000190504 Malus domestica MDP0000190504 I 0.000
MDP0000308379 Malus domestica MDP0000308379 I 0.000
MDP0000854039 Malus domestica MDP0000854039 I 0.000
mgf018116m Mimulus guttatus mgf018116m I 0.000
mgf022434m Mimulus guttatus mgf022434m I 0.000
mgf023807m Mimulus guttatus mgf023807m I 0.000
MTR_3g090760 Medicago truncatula MTR_3g090760 I 0.000
O65242_TOBAC Nicotiana tabacum O65242_TOBAC D 0.000
OBART03G38710 Oryza barthii OBART03G38710 I 0.000
OGLUM03G38530 Oryza glumaepatula OGLUM03G38530 I 0.000
OMERI03G35630 Oryza meridionalis OMERI03G35630 I 0.000
ONIVA03G40360 Oryza nivara ONIVA03G40360 I 0.000
OPUNC03G35790 Oryza punctata OPUNC03G35790 I 0.000
orange1.1g043400m.g Citrus sinensis orange1.1g043400m.g I 0.000
orange1.1g047455m.g Citrus sinensis orange1.1g047455m.g I 0.000
ORGLA03G0354400 Oryza glaberrima ORGLA03G0354400 I 0.000
ORUFI03G40350 Oryza rufipogon ORUFI03G40350 I 0.000
OS03G0815800 Oryza sativa OS03G0815800 I 0.000
PGSC0003DMG400000091 Solanum tuberosum PGSC0003DMG400000091 I 0.000
PGSC0003DMG400002350 Solanum tuberosum PGSC0003DMG400002350 I 0.000
PGSC0003DMG400030472 Solanum tuberosum PGSC0003DMG400030472 I 0.000
PGSC0003DMG400036493 Solanum tuberosum PGSC0003DMG400036493 I 0.000
PK28823.1 Cannabis sativa PK28823.1 I 0.000
Pm000232 Prunus mume Pm000232 I 0.000
Pm013049 Prunus mume Pm013049 I 0.000
Pm019793 Prunus mume Pm019793 I 0.000
POPTR_0012s01260 Populus trichocarpa POPTR_0012s01260 I 0.000
POPTR_0013s15440 Populus trichocarpa POPTR_0013s15440 I 0.000
POPTR_0015s06070 Populus trichocarpa POPTR_0015s06070 I 0.000
POPTR_0019s15190 Populus trichocarpa POPTR_0019s15190 I 0.000
PRUPE_ppa008720mg Prunus persica PRUPE_ppa008720mg I 0.000
PRUPE_ppa022995mg Prunus persica PRUPE_ppa022995mg I 0.000
PRUPE_ppa025495mg Prunus persica PRUPE_ppa025495mg I 0.000
SapurV1A.0013s0740 Salix purpurea SapurV1A.0013s0740 I 0.000
SapurV1A.0215s0310 Salix purpurea SapurV1A.0215s0310 I 0.000
SapurV1A.1017s0070 Salix purpurea SapurV1A.1017s0070 I 0.000
SapurV1A.1043s0120 Salix purpurea SapurV1A.1043s0120 I 0.000
SapurV1A.1111s0070 Salix purpurea SapurV1A.1111s0070 I 0.000
SapurV1A.1442s0010 Salix purpurea SapurV1A.1442s0010 I 0.000
SapurV1A.2151s0020 Salix purpurea SapurV1A.2151s0020 I 0.000
SapurV1A.4828s0010 Salix purpurea SapurV1A.4828s0010 I 0.000
Solyc01g095500.2 Solanum lycopersicum Solyc01g095500.2 I 0.000
Solyc03g007460.1 Solanum lycopersicum Solyc03g007460.1 I 0.000
Solyc06g051840.1 Solanum lycopersicum Solyc06g051840.1 I 0.000
Solyc06g082590.1 Solanum lycopersicum Solyc06g082590.1 I 0.000
TCM_005203 Theobroma cacao TCM_005203 I 0.000
TCM_015336 Theobroma cacao TCM_015336 I 0.000
TCM_032408 Theobroma cacao TCM_032408 I 0.000
TCM_042300 Theobroma cacao TCM_042300 I 0.000
Thhalv10013898m.g Eutrema salsugineum Thhalv10013898m.g I 0.000
Thhalv10029132m.g Eutrema salsugineum Thhalv10029132m.g I 0.000
VIT_06s0004g08190 Vitis vinifera VIT_06s0004g08190 I 0.000
VIT_16s0050g02400 Vitis vinifera VIT_16s0050g02400 I 0.000