ENSONIG00000001436 (Oreochromis niloticus)
Runt

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00853 (Runt) IPR013524 ENSONIG00000001436 T319448_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Runx1
M08163_2.00
Mus musculus
HRRCCACARVN

NBYTGTGGYYD
ChIP-seq
Mathelier et al.(2014)
MA0002.2
0.762 0.762
RUNX1
M09371_2.00
Homo sapiens
NWAACCACARV

BYTGTGGTTWN
Misc
Kulakovskiy et al.(2013)
RUNX1_HUMAN.H11MO.0.A
0.762 0.762
Runx1
M09372_2.00
Mus musculus
VWRACCACARVV

BBYTGTGGTYWB
Misc
Kulakovskiy et al.(2013)
RUNX1_MOUSE.H11MO.0.A
0.762 0.762
RUNX1
M09632_2.00
Homo sapiens
HAACCACADV

BHTGTGGTTD
Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE29180
0.762 0.762
RUNX1
M09631_2.00
Homo sapiens
VCCACWTCCTBY

RVAGGAWGTGGB
Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE17954
0.762 0.762
Runx1
M09633_2.00
Mus musculus
NWAACCACAR

YTGTGGTTWN
Misc
Heinz et al.(2010)
HPC7-Runx1_GSE22178
0.762 0.762
RUNX1
M11258_2.00
Homo sapiens
ACCRCA

TGYGGT
Transfac
Matys et al.(2006)
V$AML1_01
0.762 0.762
RUNX1
M11259_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q4_01
0.762 0.762
RUNX1
M11260_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q4_02
0.762 0.762
RUNX1
M11261_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q4
0.762 0.762
RUNX1
M11262_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q5
0.762 0.762
RUNX1
M11263_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q6
0.762 0.762
Runx2
M01307_2.00
Mus musculus
NHDACCRCAN

NTGYGGTHDN
PBM
Lambert et al.(2019)
pTH9764
0.746 0.746
RUNX2
M03468_2.00
Homo sapiens
HRACCGCAAACCRCRD

HYGYGGTTTGCGGTYD
SELEX
Jolma et al.(2013)
RUNX2_1
0.746 0.746
RUNX2
M03469_2.00
Homo sapiens
HRACCRCADWWACCRCAD

HTGYGGTWWHTGYGGTYD
SELEX
Jolma et al.(2013)
RUNX2_2
0.746 0.746
RUNX2
M03470_2.00
Homo sapiens
WAACCRCAR

YTGYGGTTW
SELEX
Jolma et al.(2013)
RUNX2_3
0.746 0.746
RUNX2
M05733_2.00
Homo sapiens
NHRACCRCADWAACCRCAVN

NBTGYGGTTWHTGYGGTYDN
SELEX
Yin et al.(2017)
RUNX2_eDBD_HT-SELEX
0.746 0.746
RUNX2
M09370_2.00
Homo sapiens
MMHAACCACAVVMH

DKBBTGTGGTTDKK
Misc
Kulakovskiy et al.(2013)
RUNX2_HUMAN.H11MO.0.A
0.746 0.746
Runx2
M09373_2.00
Mus musculus
VWRACCACARVV

BBYTGTGGTYWB
Misc
Kulakovskiy et al.(2013)
RUNX2_MOUSE.H11MO.0.A
0.746 0.746
RUNX2
M09630_2.00
Homo sapiens
NHVACCACANNN

NNNTGTGGTBDN
Misc
Heinz et al.(2010)
PCa-RUNX2_GSE33889
0.746 0.746
RUNX2
M11255_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML3_Q3
0.746 0.746
RUNX2
M11256_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML3_Q6
0.746 0.746
RUNX2
M11257_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$OSF2_Q6
0.746 0.746
RUNX2
M05734_2.00
Homo sapiens
NWAACCACRAAAACCACRRN

NYYGTGGTTTTYGTGGTTWN
SELEX
Yin et al.(2017)
RUNX2_eDBD_Methyl-HT-SELEX
0.746 0.746
RUNX3
M03464_2.00
Homo sapiens
HRACCGCAAACCRCAN

NTGYGGTTTGCGGTYD
SELEX
Jolma et al.(2013)
RUNX3_1
0.738 0.738
RUNX3
M03465_2.00
Homo sapiens
WAACCRCARN

NYTGYGGTTW
SELEX
Jolma et al.(2013)
RUNX3_2
0.738 0.738
RUNX3
M03466_2.00
Homo sapiens
HDACCRCADWAACCRCRN

NYGYGGTTWHTGYGGTHD
SELEX
Jolma et al.(2013)
RUNX3_3
0.738 0.738
RUNX3
M03467_2.00
Homo sapiens
HRACCRCAAH

DTTGYGGTYD
SELEX
Jolma et al.(2013)
RUNX3_4
0.738 0.738
RUNX3
M02751_2.00
Homo sapiens
WACCRCAM

KTGYGGTW
SELEX
Jolma et al.(2010)
RUNX3_monomer
0.738 0.738
RUNX3
M05731_2.00
Homo sapiens
YWAACCGCAAAAACCGCARV

BYTGCGGTTTTTGCGGTTWR
SELEX
Yin et al.(2017)
RUNX3_FL_HT-SELEX
0.738 0.738
RUNX3
M09369_2.00
Homo sapiens
HAACCACARN

NYTGTGGTTD
Misc
Kulakovskiy et al.(2013)
RUNX3_HUMAN.H11MO.0.A
0.738 0.738
Runx3
M09374_2.00
Mus musculus
NHRACCACARVN

NBYTGTGGTYDN
Misc
Kulakovskiy et al.(2013)
RUNX3_MOUSE.H11MO.0.A
0.738 0.738
RUNX3
M11252_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML2_Q3_01
0.738 0.738
RUNX3
M11253_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML2_Q3
0.738 0.738
RUNX3
M11254_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML2_Q4
0.738 0.738
RUNX3
M05732_2.00
Homo sapiens
HWAACCACRAAAACCACRARN

NYTYGTGGTTTTYGTGGTTWD
SELEX
Yin et al.(2017)
RUNX3_FL_Methyl-HT-SELEX
0.738 0.738
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSONIP00000001808 Runt 41 171

Links

Other Runt family TFs
Other Oreochromis niloticus TFs

170 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSXMAG00000006715 Xiphophorus maculatus ENSXMAG00000006715 I 0.892
ENSGACG00000011721 Gasterosteus aculeatus ENSGACG00000011721 I 0.885
ENSORLG00000018584 Oryzias latipes ENSORLG00000018584 I 0.869
ENSPFOG00000013752 Poecilia formosa ENSPFOG00000013752 I 0.862
ENSGMOG00000000378 Gadus morhua ENSGMOG00000000378 N 0.831
frrunt Takifugu rubripes ENSTRUG00000006274 N 0.831
Brh_R001637 Buceros rhinoceros Brh_R001637 I 0.822
Afo_R004888 Aptenodytes forsteri Afo_R004888 I 0.822
Aan_R007315 Calypte anna Aan_R007315 I 0.822
ENSFCAG00000029032 Felis catus ENSFCAG00000029032 I 0.815
ENSTNIG00000009855 Tetraodon nigroviridis ENSTNIG00000009855 I 0.808
Brh_R000794 Buceros rhinoceros Brh_R000794 I 0.802
ENSAPLG00000011653 Anas platyrhynchos ENSAPLG00000011653 I 0.802
Tal_R011874 Tyto alba Tal_R011874 I 0.802
RUNX2 Meleagris gallopavo ENSMGAG00000014267 I 0.802
ENSPSIG00000014293 Pelodiscus sinensis ENSPSIG00000014293 I 0.793
CABZ01102124.1 Danio rerio ENSDARG00000103592 I 0.789
ENSAPLG00000007026 Anas platyrhynchos ENSAPLG00000007026 I 0.789
RUNX3 Anolis carolinensis ENSACAG00000017855 I 0.783
ENSCING00000002253 Ciona intestinalis ENSCING00000002253 I 0.773
ENSSSCG00000025551 Sus scrofa ENSSSCG00000025551 I 0.772
runx2b Danio rerio ENSDARG00000059233 I 0.769
RUNX1 Procavia capensis ENSPCAG00000016747 I 0.769
RUNX1 Gorilla gorilla ENSGGOG00000012862 I 0.762
ENSNLEG00000004310 Nomascus leucogenys ENSNLEG00000004310 I 0.762
ENSGMOG00000014088 Gadus morhua ENSGMOG00000014088 I 0.762
RUNX1 Loxodonta africana ENSLAFG00000004290 I 0.762
Runx1 Mus musculus ENSMUSG00000022952 D 0.762
RUNX1 Microcebus murinus ENSMICG00000011998 I 0.762
RUNX1 Macaca mulatta ENSMMUG00000001649 I 0.762
ENSMPUG00000001340 Mustela putorius furo ENSMPUG00000001340 I 0.762
RUNX1 Oryctolagus cuniculus ENSOCUG00000013731 I 0.762
RUNX1 Pan troglodytes ENSPTRG00000013883 I 0.762
Ogr17914 Ophisaurus gracilis Ogr17914 I 0.762
ENSP00000409227-D1 Bos grunniens ENSP00000409227-D1 I 0.762
Pvit_04762 Pogona vitticeps Pvit_04762 I 0.762
XP_002939386 Xenopus tropicalis XP_002939386 I 0.762
XP_002939387 Xenopus tropicalis XP_002939387 I 0.762
Cmyd_10021516 Chelonia mydas Cmyd_10021516 I 0.762
ENSSSCG00000012051 Sus scrofa ENSSSCG00000012051 I 0.762
ENSPPYG00000011394 Pongo abelii ENSPPYG00000011394 I 0.762
ENSPSIG00000017547 Pelodiscus sinensis ENSPSIG00000017547 I 0.762
RUNX1 Gallus gallus ENSGALG00000016022 I 0.762
Runx1 Rattus norvegicus ENSRNOG00000001704 I 0.762
ENSPANG00000007357 Papio anubis ENSPANG00000007357 I 0.762
RUNX1 Otolemur garnettii ENSOGAG00000033362 I 0.762
RUNX1 Canis familiaris ENSCAFG00000009596 I 0.762
RUNX1 Bos taurus ENSBTAG00000004742 I 0.762
ENSCSAG00000008703 Chlorocebus sabaeus ENSCSAG00000008703 I 0.762
Runx1 Dipodomys ordii ENSDORG00000004347 I 0.762
ENSFALG00000000025 Ficedula albicollis ENSFALG00000000025 I 0.762
RUNX1 Homo sapiens ENSG00000159216 D 0.762
RUNX1 Callithrix jacchus ENSCJAG00000002816 I 0.762
ENSAMEG00000005325 Ailuropoda melanoleuca ENSAMEG00000005325 I 0.762
RUNX1 Dasypus novemcinctus ENSDNOG00000015041 I 0.754
ENSOPRG00000000765 Ochotona princeps ENSOPRG00000000765 I 0.754
RUNX2 Anolis carolinensis ENSACAG00000013003 I 0.754
XP_002939388 Xenopus tropicalis XP_002939388 I 0.754
RUNX1 Equus caballus ENSECAG00000003462 I 0.754
runx1.L Xenopus laevis XB-GENE-864949 I 0.754
RUNX1 Pteropus vampyrus ENSPVAG00000001606 I 0.754
Pvit_01165 Pogona vitticeps Pvit_01165 I 0.754
ENSP00000300305 Macaca fascicularis ENSP00000300305 I 0.754
RUNX1 Monodelphis domestica ENSMODG00000021051 I 0.754
RUNX2 Taeniopygia guttata ENSTGUG00000013249 I 0.754
ENSSHAG00000014782 Sarcophilus harrisii ENSSHAG00000014782 I 0.754
ENSCPOG00000002684 Cavia porcellus ENSCPOG00000002684 I 0.754
Cmyd_10020455 Chelonia mydas Cmyd_10020455 I 0.754
runx2a Danio rerio ENSDARG00000040261 I 0.754
ENSLOCG00000010990 Lepisosteus oculatus ENSLOCG00000010990 I 0.754
Gfo_R011596 Geospiza fortis Gfo_R011596 I 0.752
ENSOANG00000031074 Ornithorhynchus anatinus ENSOANG00000031074 I 0.747
RUNX2 Pan troglodytes ENSPTRG00000018228 I 0.746
ENSSHAG00000009950 Sarcophilus harrisii ENSSHAG00000009950 I 0.746
Runx2 Rattus norvegicus ENSRNOG00000020193 I 0.746
ENSCSAG00000012528 Chlorocebus sabaeus ENSCSAG00000012528 I 0.746
ENSPPYG00000016664 Pongo abelii ENSPPYG00000016664 I 0.746
ENSPANG00000006186 Papio anubis ENSPANG00000006186 I 0.746
RUNX2 Dasypus novemcinctus ENSDNOG00000034361 I 0.746
ENSLOCG00000015816 Lepisosteus oculatus ENSLOCG00000015816 I 0.746
ENSPPYG00000001714 Pongo abelii ENSPPYG00000001714 I 0.746
RUNX2 Cavia porcellus ENSCPOG00000005277 I 0.746
ENSLACG00000015930 Latimeria chalumnae ENSLACG00000015930 I 0.746
RUNX2 Bos taurus ENSBTAG00000004104 I 0.746
Myotis_brandtii_RUNX2_10026084 Myotis brandtii Myotis_brandtii_RUNX2_10026084 I 0.746
RUNX2 Gorilla gorilla ENSGGOG00000012890 I 0.746
runx3 Xenopus tropicalis XB-GENE-487784 I 0.746
ENSLACG00000011545 Latimeria chalumnae ENSLACG00000011545 I 0.746
RUNX1 Tursiops truncatus ENSTTRG00000014160 I 0.746
RUNX1 Oryzias latipes ENSORLG00000020699 I 0.746
runx1 Takifugu rubripes ENSTRUG00000012611 I 0.746
ENSTSYG00000005097 Tarsius syrichta ENSTSYG00000005097 I 0.746
RUNX2 Tursiops truncatus ENSTTRG00000006943 I 0.746
ENSSTOG00000010163 Ictidomys tridecemlineatus ENSSTOG00000010163 I 0.746
RUNX2 Homo sapiens ENSG00000124813 D 0.746
RUNX2 Macaca mulatta ENSMMUG00000019819 I 0.746
RUNX2 Ochotona princeps ENSOPRG00000002943 I 0.746
Runx2 Mus musculus ENSMUSG00000039153 D 0.746
RUNX2 Erinaceus europaeus ENSEEUG00000009243 I 0.746
RUNX2 Monodelphis domestica ENSMODG00000018912 I 0.746
RUNX2 Otolemur garnettii ENSOGAG00000003900 I 0.746
ENSTGUG00000004719 Taeniopygia guttata ENSTGUG00000004719 I 0.742
runx3 Takifugu rubripes ENSTRUG00000001517 I 0.738
RUNX3 Canis familiaris ENSCAFG00000012903 I 0.738
Alligator_sinensis_CCG001676.1 Alligator sinensis Alligator_sinensis_CCG001676.1 I 0.738
ENSTNIG00000018690 Tetraodon nigroviridis ENSTNIG00000018690 I 0.738
ENSXMAG00000018835 Xiphophorus maculatus ENSXMAG00000018835 I 0.738
Runx3 Mus musculus ENSMUSG00000070691 D 0.738
RUNX3 Tursiops truncatus ENSTTRG00000009396 I 0.738
ENSGMOG00000019132 Gadus morhua ENSGMOG00000019132 I 0.738
runx2 Takifugu rubripes ENSTRUG00000003501 I 0.738
RUNX3 Callithrix jacchus ENSCJAG00000020815 I 0.738
ENSXMAG00000003400 Xiphophorus maculatus ENSXMAG00000003400 I 0.738
Cmyd_10020845 Chelonia mydas Cmyd_10020845 I 0.738
runx3.L Xenopus laevis XB-GENE-6487158 I 0.738
ENSAMXG00000000881 Astyanax mexicanus ENSAMXG00000000881 I 0.738
ENSAMEG00000010102 Ailuropoda melanoleuca ENSAMEG00000010102 I 0.738
RUNX3 Gorilla gorilla ENSGGOG00000004848 I 0.738
ENSGALG00000026821 Gallus gallus ENSGALG00000026821 I 0.738
Pvit_17193 Pogona vitticeps Pvit_17193 I 0.738
ENSAMXG00000004048 Astyanax mexicanus ENSAMXG00000004048 I 0.738
ENSAPLG00000016439 Anas platyrhynchos ENSAPLG00000016439 I 0.738
runx3 Tetraodon nigroviridis ENSTNIG00000016911 I 0.738
runx3 Gasterosteus aculeatus ENSGACG00000007301 I 0.738
ENSAMXG00000017349 Astyanax mexicanus ENSAMXG00000017349 I 0.738
ENSAMXG00000012244 Astyanax mexicanus ENSAMXG00000012244 I 0.738
ENSGMOG00000010468 Gadus morhua ENSGMOG00000010468 I 0.738
ENSFALG00000000470 Ficedula albicollis ENSFALG00000000470 I 0.738
ENSCPOG00000000551 Cavia porcellus ENSCPOG00000000551 I 0.738
RUNX3 Homo sapiens ENSG00000020633 D 0.738
ENSONIG00000008210 Oreochromis niloticus ENSONIG00000008210 I 0.738
ENSONIG00000004914 Oreochromis niloticus ENSONIG00000004914 I 0.738
ENSCSAG00000000947 Chlorocebus sabaeus ENSCSAG00000000947 I 0.738
ENSLOCG00000002744 Lepisosteus oculatus ENSLOCG00000002744 I 0.738
runx3 Danio rerio ENSDARG00000052826 I 0.738
RUNX3 Ochotona princeps ENSOPRG00000011273 I 0.738
ENSPANG00000008140 Papio anubis ENSPANG00000008140 I 0.738
RUNX3 Dasypus novemcinctus ENSDNOG00000043493 I 0.738
runx3 Oryzias latipes ENSORLG00000017515 I 0.738
ENSPFOG00000003997 Poecilia formosa ENSPFOG00000003997 I 0.738
ENSPFOG00000016115 Poecilia formosa ENSPFOG00000016115 I 0.738
runx2 Oryzias latipes ENSORLG00000010169 I 0.738
ENSONIG00000001025 Oreochromis niloticus ENSONIG00000001025 I 0.738
RUNX3 Pan troglodytes ENSPTRG00000000351 I 0.738
ENSSTOG00000022471 Ictidomys tridecemlineatus ENSSTOG00000022471 I 0.738
RUNX3 Taeniopygia guttata ENSTGUG00000001130 I 0.738
RUNX3 Oryctolagus cuniculus ENSOCUG00000017751 I 0.738
runx2b Tetraodon nigroviridis ENSTNIG00000009685 I 0.738
Runx3 Rattus norvegicus ENSRNOG00000054217 I 0.738
ENSMODG00000013941 Monodelphis domestica ENSMODG00000013941 I 0.738
RUNX3 Loxodonta africana ENSLAFG00000008382 I 0.738
RUNX3 Otolemur garnettii ENSOGAG00000025633 I 0.738
RUNX3 Felis catus ENSFCAG00000000680 I 0.738
estExt_fgenesh2_kg.C_3770001 Branchiostoma floridae estExt_fgenesh2_kg.C_3770001 I 0.731
ENSMEUG00000014419 Macropus eugenii ENSMEUG00000014419 I 0.731
runx2b Gasterosteus aculeatus ENSGACG00000012322 I 0.731
runx2.L Xenopus laevis XB-GENE-864817 I 0.731
estExt_fgenesh2_kg.C_750001 Branchiostoma floridae estExt_fgenesh2_kg.C_750001 I 0.731
RUNX2 Equus caballus ENSECAG00000020875 I 0.731
RUNX1 Gasterosteus aculeatus ENSGACG00000015276 I 0.731
RUNX3 Macaca mulatta ENSMMUG00000002420 I 0.731
ENSPSIG00000012728 Pelodiscus sinensis ENSPSIG00000012728 I 0.731
ENSMPUG00000015804 Mustela putorius furo ENSMPUG00000015804 I 0.723
Gfo_R015914 Geospiza fortis Gfo_R015914 I 0.723
ENSPFOG00000008944 Poecilia formosa ENSPFOG00000008944 I 0.723
ENSXMAG00000004396 Xiphophorus maculatus ENSXMAG00000004396 I 0.723
ENSLACG00000013776 Latimeria chalumnae ENSLACG00000013776 I 0.715
runx2 Xenopus tropicalis XB-GENE-482021 I 0.715
ENSOARG00000006421 Ovis aries ENSOARG00000006421 I 0.708
ENSP00000382800 Macaca fascicularis ENSP00000382800 I 0.705