SINV13405 (Solenopsis invicta)
Runt

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00853 (Runt) IPR013524 SINV13405 T319622_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
lz
M03964_2.00
Drosophila melanogaster
HRACCGCAAHM

KDTTGCGGTYD
SELEX
Nitta et al.(2015)
lz_1
0.833 0.833
lz
M03965_2.00
Drosophila melanogaster
HVACCRCARWAACCRCAV

BTGYGGTTWYTGYGGTBD
SELEX
Nitta et al.(2015)
lz_2
0.833 0.833
lz
M03966_2.00
Drosophila melanogaster
WRACCRCAWTAACCRCAA

TTGYGGTTAWTGYGGTYW
SELEX
Nitta et al.(2015)
lz_3
0.833 0.833
lz
M03967_2.00
Drosophila melanogaster
HRACCGCAAAACCRCAR

YTGYGGTTTTGCGGTYD
SELEX
Nitta et al.(2015)
lz_4
0.833 0.833
run
M06444_2.00
Drosophila melanogaster
WAACCGCAR

YTGCGGTTW
B1H
Zhu et al.(2011)
run_Bgb_NBT_FBgn0003300
0.700 0.700
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SINV13405-PA Runt 1 30

Links

Other Runt family TFs
Other Solenopsis invicta TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACRE_014530 Acremonium chrysogenum ACRE_014530 N 0.000
ANCDUO_24269 Ancylostoma duodenale ANCDUO_24269 N 0.000
ACAC_0000798501 Angiostrongylus cantonensis ACAC_0000798501 N 0.000
ACOC_0001190001 Angiostrongylus costaricensis ACOC_0001190001 N 0.000
MCYG_02430 Arthroderma otae MCYG_02430 N 0.000
EURHEDRAFT_413306 Aspergillus ruber EURHEDRAFT_413306 N 0.000
BDDG_02106 Blastomyces dermatitidis BDDG_02106 N 0.000
PVAR5_1404 Byssochlamys spectabilis PVAR5_1404 N 0.000
A1O1_00857 Capronia coronata A1O1_00857 N 0.000
A1O3_02901 Capronia epimyces A1O3_02901 N 0.000
PV04_05024 Capronia semiimmersa PV04_05024 N 0.000
Z519_11956 Cladophialophora bantiana Z519_11956 N 0.000
G647_04603 Cladophialophora carrionii G647_04603 N 0.000
PV07_07953 Cladophialophora immunda PV07_07953 N 0.000
A1O5_03082 Cladophialophora psammophila A1O5_03082 N 0.000
A1O7_04095 Cladophialophora yegresii A1O7_04095 N 0.000
CIMG_04934 Coccidioides immitis CIMG_04934 N 0.000
CPC735_069450 Coccidioides posadasii CPC735_069450 N 0.000
W97_06384 Coniosporium apollinis W97_06384 N 0.000
HMPREF1541_09174 Cyphellophora europaea HMPREF1541_09174 N 0.000
EPUS_02925 Endocarpon pusillum EPUS_02925 N 0.000
A1O9_00215 Exophiala aquamarina A1O9_00215 N 0.000
HMPREF1120_06620 Exophiala dermatitidis HMPREF1120_06620 N 0.000
PV10_00681 Exophiala mesophila PV10_00681 N 0.000
PV06_10373 Exophiala oligosperma PV06_10373 N 0.000
PV11_04222 Exophiala sideris PV11_04222 N 0.000
PV08_10670 Exophiala spinifera PV08_10670 N 0.000
PV05_01390 Exophiala xenobiotica PV05_01390 N 0.000
Z517_11784 Fonsecaea pedrosoi Z517_11784 N 0.000
MCYG_02430 Microsporum canis MCYG_02430 N 0.000
MGYG_07436 Microsporum gypseum MGYG_07436 N 0.000
PABG_01288 Paracoccidioides brasiliensis PABG_01288 N 0.000
PAAG_11191 Paracoccidioides sp lutzii PAAG_11191 N 0.000
Pc16g09240 Penicillium chrysogenum Pc16g09240 N 0.000
PDIP_20560 Penicillium digitatum PDIP_20560 N 0.000
PEX1_048030 Penicillium expansum PEX1_048030 N 0.000
PITC_020100 Penicillium italicum PITC_020100 N 0.000
PMAA_054260 Penicillium marneffei PMAA_054260 N 0.000
PDE_02914 Penicillium oxalicum PDE_02914 N 0.000
PCH_Pc16g09240 Penicillium rubens PCH_Pc16g09240 N 0.000
U727_00434111271 Penicillium solitum U727_00434111271 N 0.000
Z518_09874 Rhinocladiella mackenziei Z518_09874 N 0.000
Sakowv30021656m.g Saccoglossus kowalevskii Sakowv30021656m.g N 0.000
SVUK_0001721701 Strongylus vulgaris SVUK_0001721701 N 0.000
PMAA_054260 Talaromyces marneffei PMAA_054260 N 0.000
TSTA_018670 Talaromyces stipitatus TSTA_018670 N 0.000
TEQG_05876 Trichophyton equinum TEQG_05876 N 0.000
H101_01603 Trichophyton interdigitale H101_01603 N 0.000
H102_03175 Trichophyton rubrum H102_03175 N 0.000
H105_03193 Trichophyton soudanense H105_03193 N 0.000
TESG_06104 Trichophyton tonsurans TESG_06104 N 0.000
UREG_06618 Uncinocarpus reesii UREG_06618 N 0.000