YQE_12216 (Dendroctonus ponderosae)
Runt

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00853 (Runt) IPR013524 YQE_12216 T319636_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RUNX3
M03464_2.00
Homo sapiens
HRACCGCAAACCRCAN

NTGYGGTTTGCGGTYD
SELEX
Jolma et al.(2013)
RUNX3_1
0.700 0.700
RUNX3
M03465_2.00
Homo sapiens
WAACCRCARN

NYTGYGGTTW
SELEX
Jolma et al.(2013)
RUNX3_2
0.700 0.700
RUNX3
M03466_2.00
Homo sapiens
HDACCRCADWAACCRCRN

NYGYGGTTWHTGYGGTHD
SELEX
Jolma et al.(2013)
RUNX3_3
0.700 0.700
RUNX3
M03467_2.00
Homo sapiens
HRACCRCAAH

DTTGYGGTYD
SELEX
Jolma et al.(2013)
RUNX3_4
0.700 0.700
RUNX3
M02751_2.00
Homo sapiens
WACCRCAM

KTGYGGTW
SELEX
Jolma et al.(2010)
RUNX3_monomer
0.700 0.700
RUNX3
M05731_2.00
Homo sapiens
YWAACCGCAAAAACCGCARV

BYTGCGGTTTTTGCGGTTWR
SELEX
Yin et al.(2017)
RUNX3_FL_HT-SELEX
0.700 0.700
RUNX3
M09369_2.00
Homo sapiens
HAACCACARN

NYTGTGGTTD
Misc
Kulakovskiy et al.(2013)
RUNX3_HUMAN.H11MO.0.A
0.700 0.700
Runx3
M09374_2.00
Mus musculus
NHRACCACARVN

NBYTGTGGTYDN
Misc
Kulakovskiy et al.(2013)
RUNX3_MOUSE.H11MO.0.A
0.700 0.700
RUNX3
M11252_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML2_Q3_01
0.700 0.700
RUNX3
M11253_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML2_Q3
0.700 0.700
RUNX3
M11254_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML2_Q4
0.700 0.700
RUNX3
M05732_2.00
Homo sapiens
HWAACCACRAAAACCACRARN

NYTYGTGGTTTTYGTGGTTWD
SELEX
Yin et al.(2017)
RUNX3_FL_Methyl-HT-SELEX
0.700 0.700
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENN71291 Runt 40 150

Links

Other Runt family TFs
Other Dendroctonus ponderosae TFs

116 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AAEL000623 Aedes aegypti AAEL000623 I 0.000
AAEL000631 Aedes aegypti AAEL000631 I 0.000
AALB008012 Anopheles albimanus AALB008012 I 0.000
AALB008013 Anopheles albimanus AALB008013 I 0.000
Aan_R001550 Calypte anna Aan_R001550 I 0.000
AARA011979 Anopheles arabiensis AARA011979 I 0.000
AARA011980 Anopheles arabiensis AARA011980 I 0.000
AATE008476 Anopheles atroparvus AATE008476 I 0.000
AATE020589 Anopheles atroparvus AATE020589 I 0.000
ACEP23384 Atta cephalotes ACEP23384 I 0.000
ACHR001414 Anopheles christyi ACHR001414 I 0.000
ACHR004082 Anopheles christyi ACHR004082 I 0.000
ACOM031025 Anopheles coluzzii ACOM031025 I 0.000
ACOM031032 Anopheles coluzzii ACOM031032 I 0.000
ACUA009622 Anopheles culicifacies ACUA009622 I 0.000
ACUA018162 Anopheles culicifacies ACUA018162 I 0.000
ACYPI34548 Acyrthosiphon pisum ACYPI34548 I 0.000
ADAC002327 Anopheles darlingi ADAC002327 I 0.000
ADIR000710 Anopheles dirus ADIR000710 I 0.000
ADIR000711 Anopheles dirus ADIR000711 I 0.000
AEPI007160 Anopheles epiroticus AEPI007160 I 0.000
AEPI007161 Anopheles epiroticus AEPI007161 I 0.000
AFAF000663 Anopheles farauti AFAF000663 I 0.000
AFAF005680 Anopheles farauti AFAF005680 I 0.000
Afo_R013226 Aptenodytes forsteri Afo_R013226 I 0.000
AFUN009836 Anopheles funestus AFUN009836 I 0.000
AFUN009837 Anopheles funestus AFUN009837 I 0.000
AGAP007783 Anopheles gambiae AGAP007783 I 0.000
AMAM003661 Anopheles maculatus AMAM003661 I 0.000
AMAM005757 Anopheles maculatus AMAM005757 I 0.000
AMEC020313 Anopheles melas AMEC020313 I 0.000
AMEM005966 Anopheles merus AMEM005966 I 0.000
AMEM008520 Anopheles merus AMEM008520 I 0.000
AMIN006367 Anopheles minimus AMIN006367 I 0.000
AMIN006368 Anopheles minimus AMIN006368 I 0.000
AQUA003641 Anopheles quadriannulatus AQUA003641 I 0.000
AQUA003642 Anopheles quadriannulatus AQUA003642 I 0.000
ASIS002985 Anopheles sinensis ASIS002985 I 0.000
ASIS021139 Anopheles sinensis ASIS021139 I 0.000
ASTEI01672 Anopheles stephensi ASTEI01672 I 0.000
ASTEI01673 Anopheles stephensi ASTEI01673 I 0.000
BGIBMGA006182 Bombyx mori BGIBMGA006182 I 0.000
Brh_R007088 Buceros rhinoceros Brh_R007088 I 0.000
CapteG133139 Capitella teleta CapteG133139 I 0.000
Cflo_04549--XP_393815.2_APIME Camponotus floridanus Cflo_04549--XP_393815.2_APIME I 0.000
CGI_10019940 Crassostrea gigas CGI_10019940 I 0.000
CLEC013329 Cimex lectularius CLEC013329 I 0.000
Cmyd_10006831 Chelonia mydas Cmyd_10006831 I 0.000
CPIJ006639 Culex quinquefasciatus CPIJ006639 I 0.000
CPIJ006640 Culex quinquefasciatus CPIJ006640 I 0.000
CpipJ_CPIJ006639 Culex pipiens CpipJ_CPIJ006639 I 0.000
CpipJ_CPIJ006640 Culex pipiens CpipJ_CPIJ006640 I 0.000
DAPPUDRAFT_26189 Daphnia pulex DAPPUDRAFT_26189 I 0.000
ENSACAG00000008561 Anolis carolinensis ENSACAG00000008561 I 0.000
ENSAMEG00000002669 Ailuropoda melanoleuca ENSAMEG00000002669 I 0.000
ENSAMXG00000006073 Astyanax mexicanus ENSAMXG00000006073 I 0.000
ENSAPLG00000002817 Anas platyrhynchos ENSAPLG00000002817 I 0.000
ENSCSAG00000007467 Chlorocebus sabaeus ENSCSAG00000007467 I 0.000
ENSFALG00000013344 Ficedula albicollis ENSFALG00000013344 I 0.000
ENSGMOG00000012709 Gadus morhua ENSGMOG00000012709 I 0.000
ENSLACG00000009363 Latimeria chalumnae ENSLACG00000009363 I 0.000
ENSLOCG00000013145 Lepisosteus oculatus ENSLOCG00000013145 I 0.000
ENSMICG00000004238 Microcebus murinus ENSMICG00000004238 I 0.000
ENSMPUG00000000633 Mustela putorius furo ENSMPUG00000000633 I 0.000
ENSNLEG00000000645 Nomascus leucogenys ENSNLEG00000000645 I 0.000
ENSOARG00000015521 Ovis aries ENSOARG00000015521 I 0.000
ENSONIG00000009885 Oreochromis niloticus ENSONIG00000009885 I 0.000
ENSP00000368805 Macaca fascicularis ENSP00000368805 I 0.000
ENSP00000368805-D1 Bos grunniens ENSP00000368805-D1 I 0.000
ENSPANG00000026314 Papio anubis ENSPANG00000026314 I 0.000
ENSPFOG00000008781 Poecilia formosa ENSPFOG00000008781 I 0.000
ENSPMAG00000009211 Petromyzon marinus ENSPMAG00000009211 I 0.000
ENSPPYG00000016228 Pongo abelii ENSPPYG00000016228 I 0.000
ENSPSIG00000004698 Pelodiscus sinensis ENSPSIG00000004698 I 0.000
ENSSHAG00000010590 Sarcophilus harrisii ENSSHAG00000010590 I 0.000
ENSSTOG00000009563 Ictidomys tridecemlineatus ENSSTOG00000009563 I 0.000
ENSTRUG00000001670 Takifugu rubripes ENSTRUG00000001670 I 0.000
ENSTRUG00000003586 Takifugu rubripes ENSTRUG00000003586 D 0.000
ENSXMAG00000002726 Xiphophorus maculatus ENSXMAG00000002726 I 0.000
fgenesh2_pg.scaffold_122000051 Branchiostoma floridae fgenesh2_pg.scaffold_122000051 I 0.000
GA11505 Drosophila pseudoobscura FBgn0071556 I 0.000
GA17734 Drosophila pseudoobscura FBgn0077744 I 0.000
GB45031 Apis mellifera GB45031 I 0.000
gcm Drosophila melanogaster FBgn0014179 D 0.000
GCM1 Oryctolagus cuniculus ENSOCUG00000009246 I 0.000
GCM1 Erinaceus europaeus ENSEEUG00000013606 I 0.000
GCM2 Gallus gallus ENSGALG00000012768 I 0.000
gcm2 Oryzias latipes ENSORLG00000019715 I 0.000
GCM2 Dasypus novemcinctus ENSDNOG00000003701 I 0.000
GCM2 Procavia capensis ENSPCAG00000011887 I 0.000
gcm2 Xenopus tropicalis XB-GENE-492156 I 0.000
GCM2 Myotis lucifugus ENSMLUG00000004637 I 0.000
gcm2 Danio rerio ENSDARG00000045413 I 0.000
GCM2 Choloepus hoffmanni ENSCHOG00000011562 I 0.000
GCM2 Felis catus ENSFCAG00000001608 I 0.000
GCM2 Bos taurus ENSBTAG00000018787 I 0.000
GCM2 Anolis carolinensis ENSACAG00000008677 I 0.000
GCM2 Cavia porcellus ENSCPOG00000011254 I 0.000
GCM2 Equus caballus ENSECAG00000017632 I 0.000
GCM2 Oryctolagus cuniculus ENSOCUG00000017698 I 0.000
GCM2 Gorilla gorilla ENSGGOG00000023360 I 0.000
GCM2 Loxodonta africana ENSLAFG00000007475 I 0.000
GCM2 Meleagris gallopavo ENSMGAG00000003533 I 0.000
GCM2 Canis familiaris ENSCAFG00000009747 I 0.000
gcm2 Gasterosteus aculeatus ENSGACG00000001157 I 0.000
GCM2 Macaca mulatta ENSMMUG00000007719 I 0.000
GCM2 Monodelphis domestica ENSMODG00000010371 I 0.000
GCM2 Homo sapiens ENSG00000124827 D 0.000
Gcm2 Mus musculus ENSMUSG00000021362 I 0.000
GCM2 Echinops telfairi ENSETEG00000012473 I 0.000
GCM2 Ornithorhynchus anatinus ENSOANG00000007191 I 0.000
GCM2 Ochotona princeps ENSOPRG00000012641 I 0.000
GCM2 Pan troglodytes ENSPTRG00000017724 I 0.000
Gcm2 Rattus norvegicus ENSRNOG00000015008 I 0.000
GCM2 Tupaia belangeri ENSTBEG00000006181 I 0.000
GCM2 Taeniopygia guttata ENSTGUG00000005756 D 0.000
GCM2 Tursiops truncatus ENSTTRG00000003674 I 0.000
gcm2 Drosophila melanogaster FBgn0019809 D 0.000
GCM2 Vicugna pacos ENSVPAG00000003006 I 0.000
gcm2 Tetraodon nigroviridis ENSTNIG00000005042 D 0.000
gcm2.S Xenopus laevis XB-GENE-866131 I 0.000
GD22349 Drosophila simulans FBgn0193756 I 0.000
GE10457 Drosophila yakuba FBgn0228318 I 0.000
GE18856 Drosophila yakuba FBgn0236239 I 0.000
GF21907 Drosophila ananassae FBgn0098907 I 0.000
GF22779 Drosophila ananassae FBgn0099773 I 0.000
Gfo_R006501 Geospiza fortis Gfo_R006501 I 0.000
GG10041 Drosophila erecta FBgn0102353 I 0.000
GG24019 Drosophila erecta FBgn0116158 I 0.000
GH10675 Drosophila grimshawi FBgn0118156 I 0.000
GH11056 Drosophila grimshawi FBgn0118537 I 0.000
GI11073 Drosophila mojavensis FBgn0133835 I 0.000
GI17574 Drosophila mojavensis FBgn0140318 I 0.000
GJ17916 Drosophila virilis FBgn0205084 I 0.000
GJ18313 Drosophila virilis FBgn0205472 I 0.000
GK23810 Drosophila willistoni FBgn0225772 I 0.000
GK23867 Drosophila willistoni FBgn0225829 I 0.000
GL18919 Drosophila persimilis FBgn0156520 I 0.000
GL19218 Drosophila persimilis FBgn0156817 I 0.000
GM12386 Drosophila sechellia FBgn0167323 I 0.000
GM17569 Drosophila sechellia FBgn0172477 I 0.000
gw.285.88.1 Branchiostoma floridae gw.285.88.1 I 0.000
gw.943.3.1 Branchiostoma floridae gw.943.3.1 I 0.000
HMEL005671 Heliconius melpomene HMEL005671 I 0.000
Hsal_09608--XP_393815.2_APIME Harpegnathos saltator Hsal_09608--XP_393815.2_APIME I 0.000
ISCW022914 Ixodes scapularis ISCW022914 I 0.000
KGM_05743 Danaus plexippus KGM_05743 I 0.000
L798_07938 Zootermopsis nevadensis L798_07938 I 0.000
LCUP008083 Lucilia cuprina LCUP008083 I 0.000
LDEC012509 Leptinotarsa decemlineata LDEC012509 I 0.000
MCINX011946 Melitaea cinxia MCINX011946 I 0.000
MDOA003644 Musca domestica MDOA003644 I 0.000
MDOA004732 Musca domestica MDOA004732 I 0.000
NV17454 Nasonia vitripennis NV17454 I 0.000
Ocbimv22027544m.g Octopus bimaculoides Ocbimv22027544m.g I 0.000
PHUM436840 Pediculus humanus PHUM436840 I 0.000
PPAI003635 Phlebotomus papatasi PPAI003635 I 0.000
Pvit_11235 Pogona vitticeps Pvit_11235 I 0.000
RPRC001299 Rhodnius prolixus RPRC001299 I 0.000
Sakowv30018670m.g Saccoglossus kowalevskii Sakowv30018670m.g I 0.000
SINV21711 Solenopsis invicta SINV21711 I 0.000
SMAR010130 Strigamia maritima SMAR010130 I 0.000
TC014730 Tribolium castaneum TC014730 I 0.000
tetur09g06060 Tetranychus urticae tetur09g06060 I 0.000
YQE_03062 Dendroctonus ponderosae YQE_03062 I 0.000