Cflo_03910--XP_001121886.1_APIME (Camponotus floridanus)
Runt

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00853 (Runt) IPR013524 Cflo_03910--XP_001121886.1_APIME T319650_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
run
M06444_2.00
Drosophila melanogaster
WAACCGCAR

YTGCGGTTW
B1H
Zhu et al.(2011)
run_Bgb_NBT_FBgn0003300
0.769 0.769
lz
M03964_2.00
Drosophila melanogaster
HRACCGCAAHM

KDTTGCGGTYD
SELEX
Nitta et al.(2015)
lz_1
0.708 0.708
lz
M03965_2.00
Drosophila melanogaster
HVACCRCARWAACCRCAV

BTGYGGTTWYTGYGGTBD
SELEX
Nitta et al.(2015)
lz_2
0.708 0.708
lz
M03966_2.00
Drosophila melanogaster
WRACCRCAWTAACCRCAA

TTGYGGTTAWTGYGGTYW
SELEX
Nitta et al.(2015)
lz_3
0.708 0.708
lz
M03967_2.00
Drosophila melanogaster
HRACCGCAAAACCRCAR

YTGYGGTTTTGCGGTYD
SELEX
Nitta et al.(2015)
lz_4
0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cflo_03910--XP_001121886.1_APIME Runt 16 145

Links

Other Runt family TFs
Other Camponotus floridanus TFs

Invalid Input OrderBy

162 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action