CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ENSP00000352514
(
Macaca fascicularis
)
Runt
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00853 (Runt)
IPR013524
ENSP00000352514
T319658_2.00
GigaDB (2015-Oct-22)
NCBI Gene Info:
This gene is a member of the RUNX family of transcription factors and encodes a nuclear protein with an Runt DNA-binding domain. This protein is essential for osteoblastic differentiation and skeletal morphogenesis and acts as a scaffold for nucleic acids and regulatory factors involved in skeletal gene expression. The protein can bind DNA both as a monomer or, with more affinity, as a subunit of a heterodimeric complex. Two regions of potential trinucleotide repeat expansions are present in the N-terminal region of the encoded protein, and these and other mutations in this gene have been associated with the bone development disorder cleidocranial dysplasia (CCD). Transcript variants that encode different protein isoforms result from the use of alternate promoters as well as alternate splicing. [provided by RefSeq, Jul 2016]
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Runx2
M01307_2.00
Mus musculus
NHDACCRCAN
NTGYGGTHDN
PBM
Lambert et al.(2019)
pTH9764
0.876
0.876
RUNX2
M03468_2.00
Homo sapiens
HRACCGCAAACCRCRD
HYGYGGTTTGCGGTYD
SELEX
Jolma et al.(2013)
RUNX2_1
0.876
0.876
RUNX2
M03469_2.00
Homo sapiens
HRACCRCADWWACCRCAD
HTGYGGTWWHTGYGGTYD
SELEX
Jolma et al.(2013)
RUNX2_2
0.876
0.876
RUNX2
M03470_2.00
Homo sapiens
WAACCRCAR
YTGYGGTTW
SELEX
Jolma et al.(2013)
RUNX2_3
0.876
0.876
RUNX2
M05733_2.00
Homo sapiens
NHRACCRCADWAACCRCAVN
NBTGYGGTTWHTGYGGTYDN
SELEX
Yin et al.(2017)
RUNX2_eDBD_HT-SELEX
0.876
0.876
RUNX2
M09370_2.00
Homo sapiens
MMHAACCACAVVMH
DKBBTGTGGTTDKK
Misc
Kulakovskiy et al.(2013)
RUNX2_HUMAN.H11MO.0.A
0.876
0.876
Runx2
M09373_2.00
Mus musculus
VWRACCACARVV
BBYTGTGGTYWB
Misc
Kulakovskiy et al.(2013)
RUNX2_MOUSE.H11MO.0.A
0.876
0.876
RUNX2
M09630_2.00
Homo sapiens
NHVACCACANNN
NNNTGTGGTBDN
Misc
Heinz et al.(2010)
PCa-RUNX2_GSE33889
0.876
0.876
RUNX2
M11255_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML3_Q3
0.876
0.876
RUNX2
M11256_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML3_Q6
0.876
0.876
RUNX2
M11257_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$OSF2_Q6
0.876
0.876
RUNX2
M05734_2.00
Homo sapiens
NWAACCACRAAAACCACRRN
NYYGTGGTTTTYGTGGTTWN
SELEX
Yin et al.(2017)
RUNX2_eDBD_Methyl-HT-SELEX
0.876
0.876
RUNX3
M03464_2.00
Homo sapiens
HRACCGCAAACCRCAN
NTGYGGTTTGCGGTYD
SELEX
Jolma et al.(2013)
RUNX3_1
0.857
0.857
RUNX3
M03465_2.00
Homo sapiens
WAACCRCARN
NYTGYGGTTW
SELEX
Jolma et al.(2013)
RUNX3_2
0.857
0.857
RUNX3
M03466_2.00
Homo sapiens
HDACCRCADWAACCRCRN
NYGYGGTTWHTGYGGTHD
SELEX
Jolma et al.(2013)
RUNX3_3
0.857
0.857
RUNX3
M03467_2.00
Homo sapiens
HRACCRCAAH
DTTGYGGTYD
SELEX
Jolma et al.(2013)
RUNX3_4
0.857
0.857
RUNX3
M02751_2.00
Homo sapiens
WACCRCAM
KTGYGGTW
SELEX
Jolma et al.(2010)
RUNX3_monomer
0.857
0.857
RUNX3
M05731_2.00
Homo sapiens
YWAACCGCAAAAACCGCARV
BYTGCGGTTTTTGCGGTTWR
SELEX
Yin et al.(2017)
RUNX3_FL_HT-SELEX
0.857
0.857
RUNX3
M09369_2.00
Homo sapiens
HAACCACARN
NYTGTGGTTD
Misc
Kulakovskiy et al.(2013)
RUNX3_HUMAN.H11MO.0.A
0.857
0.857
Runx3
M09374_2.00
Mus musculus
NHRACCACARVN
NBYTGTGGTYDN
Misc
Kulakovskiy et al.(2013)
RUNX3_MOUSE.H11MO.0.A
0.857
0.857
RUNX3
M11252_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML2_Q3_01
0.857
0.857
RUNX3
M11253_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML2_Q3
0.857
0.857
RUNX3
M11254_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML2_Q4
0.857
0.857
RUNX3
M05732_2.00
Homo sapiens
HWAACCACRAAAACCACRARN
NYTYGTGGTTTTYGTGGTTWD
SELEX
Yin et al.(2017)
RUNX3_FL_Methyl-HT-SELEX
0.857
0.857
Runx1
M08163_2.00
Mus musculus
HRRCCACARVN
NBYTGTGGYYD
ChIP-seq
Mathelier et al.(2014)
MA0002.2
0.819
0.819
RUNX1
M09371_2.00
Homo sapiens
NWAACCACARV
BYTGTGGTTWN
Misc
Kulakovskiy et al.(2013)
RUNX1_HUMAN.H11MO.0.A
0.819
0.819
Runx1
M09372_2.00
Mus musculus
VWRACCACARVV
BBYTGTGGTYWB
Misc
Kulakovskiy et al.(2013)
RUNX1_MOUSE.H11MO.0.A
0.819
0.819
RUNX1
M09632_2.00
Homo sapiens
HAACCACADV
BHTGTGGTTD
Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE29180
0.819
0.819
RUNX1
M09631_2.00
Homo sapiens
VCCACWTCCTBY
RVAGGAWGTGGB
Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE17954
0.819
0.819
Runx1
M09633_2.00
Mus musculus
NWAACCACAR
YTGTGGTTWN
Misc
Heinz et al.(2010)
HPC7-Runx1_GSE22178
0.819
0.819
RUNX1
M11258_2.00
Homo sapiens
ACCRCA
TGYGGT
Transfac
Matys et al.(2006)
V$AML1_01
0.819
0.819
RUNX1
M11259_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q4_01
0.819
0.819
RUNX1
M11260_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q4_02
0.819
0.819
RUNX1
M11261_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q4
0.819
0.819
RUNX1
M11262_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q5
0.819
0.819
RUNX1
M11263_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q6
0.819
0.819
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSP00000352514
Runt
72
177
NSLFSTVTPCQQNFFWVVALGEVPDGTVVTVMAGNDENYSAELRNASAVMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYHRAIKVTVDGPREPRRHR
Links
Other
Runt
family TFs
Other
Macaca fascicularis
TFs
137 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSSSCG00000025551
Sus scrofa
ENSSSCG00000025551
I
1.000
RUNX2
Myotis lucifugus
ENSMLUG00000000514
I
1.000
RUNX2
Tupaia belangeri
ENSTBEG00000000948
I
1.000
ENSAMEG00000009223
Ailuropoda melanoleuca
ENSAMEG00000009223
I
1.000
RUNX2
Loxodonta africana
ENSLAFG00000005054
I
1.000
RUNX2
Felis catus
ENSFCAG00000022480
I
1.000
ENSOCUG00000011739
Oryctolagus cuniculus
ENSOCUG00000011739
I
1.000
RUNX2
Ornithorhynchus anatinus
ENSOANG00000008265
I
1.000
ENSBTAP00000006227-D1
Bos grunniens
ENSBTAP00000006227-D1
I
1.000
Afo_R008955
Aptenodytes forsteri
Afo_R008955
I
0.988
ENSAPLG00000011653
Anas platyrhynchos
ENSAPLG00000011653
I
0.978
RUNX2
Meleagris gallopavo
ENSMGAG00000014267
I
0.978
Brh_R000794
Buceros rhinoceros
Brh_R000794
I
0.978
Tal_R011874
Tyto alba
Tal_R011874
I
0.978
runx2b
Danio rerio
ENSDARG00000059233
I
0.974
Gfo_R013848
Geospiza fortis
Gfo_R013848
I
0.974
Alligator_sinensis_CCG010991.1
Alligator sinensis
Alligator_sinensis_CCG010991.1
I
0.973
ENSPSIG00000014293
Pelodiscus sinensis
ENSPSIG00000014293
I
0.967
RUNX1
Macaca mulatta
ENSMMUG00000001649
I
0.960
RUNX1
Callithrix jacchus
ENSCJAG00000002816
I
0.960
RUNX3
Anolis carolinensis
ENSACAG00000017855
I
0.957
ENSFCAG00000029032
Felis catus
ENSFCAG00000029032
I
0.954
ENSOANG00000031074
Ornithorhynchus anatinus
ENSOANG00000031074
I
0.947
CABZ01102124.1
Danio rerio
ENSDARG00000103592
I
0.947
Afo_R004888
Aptenodytes forsteri
Afo_R004888
I
0.944
Brh_R001637
Buceros rhinoceros
Brh_R001637
I
0.944
Aan_R007315
Calypte anna
Aan_R007315
I
0.944
ENSAPLG00000007026
Anas platyrhynchos
ENSAPLG00000007026
I
0.921
RUNX2
Monodelphis domestica
ENSMODG00000018912
I
0.876
RUNX2
Macaca mulatta
ENSMMUG00000019819
I
0.876
Runx2
Mus musculus
ENSMUSG00000039153
D
0.876
ENSLOCG00000015816
Lepisosteus oculatus
ENSLOCG00000015816
I
0.876
ENSSHAG00000009950
Sarcophilus harrisii
ENSSHAG00000009950
I
0.876
ENSSTOG00000010163
Ictidomys tridecemlineatus
ENSSTOG00000010163
I
0.876
RUNX2
Tursiops truncatus
ENSTTRG00000006943
I
0.876
ENSP00000382800
Macaca fascicularis
ENSP00000382800
I
0.876
Runx2
Rattus norvegicus
ENSRNOG00000020193
I
0.876
RUNX2
Pan troglodytes
ENSPTRG00000018228
I
0.876
ENSPANG00000006186
Papio anubis
ENSPANG00000006186
I
0.876
ENSPPYG00000016664
Pongo abelii
ENSPPYG00000016664
I
0.876
RUNX2
Otolemur garnettii
ENSOGAG00000003900
I
0.876
RUNX2
Ochotona princeps
ENSOPRG00000002943
I
0.876
RUNX2
Homo sapiens
ENSG00000124813
D
0.876
ENSCSAG00000012528
Chlorocebus sabaeus
ENSCSAG00000012528
I
0.876
RUNX2
Cavia porcellus
ENSCPOG00000005277
I
0.876
RUNX2
Dasypus novemcinctus
ENSDNOG00000034361
I
0.876
RUNX2
Gorilla gorilla
ENSGGOG00000012890
I
0.876
RUNX2
Bos taurus
ENSBTAG00000004104
I
0.876
RUNX2
Equus caballus
ENSECAG00000020875
I
0.876
ENSLACG00000011545
Latimeria chalumnae
ENSLACG00000011545
I
0.876
RUNX2
Erinaceus europaeus
ENSEEUG00000009243
I
0.876
Pvit_01165
Pogona vitticeps
Pvit_01165
I
0.867
runx2a
Danio rerio
ENSDARG00000040261
I
0.867
RUNX2
Taeniopygia guttata
ENSTGUG00000013249
I
0.867
RUNX2
Anolis carolinensis
ENSACAG00000013003
I
0.867
Cmyd_10020455
Chelonia mydas
Cmyd_10020455
I
0.867
ENSAMXG00000017349
Astyanax mexicanus
ENSAMXG00000017349
I
0.867
ENSCING00000002253
Ciona intestinalis
ENSCING00000002253
I
0.867
Gfo_R000714
Geospiza fortis
Gfo_R000714
I
0.857
ENSGALG00000026484
Gallus gallus
ENSGALG00000026484
I
0.857
ENSMPUG00000015804
Mustela putorius furo
ENSMPUG00000015804
I
0.857
runx3
Oryzias latipes
ENSORLG00000017515
I
0.848
ENSAMXG00000004048
Astyanax mexicanus
ENSAMXG00000004048
I
0.848
ENSPPYG00000001714
Pongo abelii
ENSPPYG00000001714
I
0.848
runx3
Danio rerio
ENSDARG00000052826
I
0.848
ENSXMAG00000018835
Xiphophorus maculatus
ENSXMAG00000018835
I
0.848
RUNX3
Callithrix jacchus
ENSCJAG00000020815
I
0.848
ENSPFOG00000003997
Poecilia formosa
ENSPFOG00000003997
I
0.848
runx2.L
Xenopus laevis
XB-GENE-864817
I
0.848
ENSFALG00000001493
Ficedula albicollis
ENSFALG00000001493
I
0.848
RUNX3
Myotis lucifugus
ENSMLUG00000003395
I
0.848
runx3
Gasterosteus aculeatus
ENSGACG00000007301
I
0.848
ENSONIG00000008210
Oreochromis niloticus
ENSONIG00000008210
I
0.848
runx2b
Gasterosteus aculeatus
ENSGACG00000012322
I
0.838
ENSSHAG00000012559
Sarcophilus harrisii
ENSSHAG00000012559
I
0.838
ENSAMXG00000000881
Astyanax mexicanus
ENSAMXG00000000881
I
0.838
ENSNLEG00000009021
Nomascus leucogenys
ENSNLEG00000009021
I
0.838
RUNX3
Bos taurus
ENSBTAG00000019800
I
0.838
ENSLOCG00000002744
Lepisosteus oculatus
ENSLOCG00000002744
I
0.838
Aan_R005895
Calypte anna
Aan_R005895
I
0.838
runx2
Xenopus tropicalis
XB-GENE-482021
I
0.838
ENSP00000300305
Macaca fascicularis
ENSP00000300305
I
0.829
ENSCPOG00000002684
Cavia porcellus
ENSCPOG00000002684
I
0.829
runx2
Takifugu rubripes
ENSTRUG00000003501
I
0.829
RUNX1
Monodelphis domestica
ENSMODG00000021051
I
0.819
XP_002939386
Xenopus tropicalis
XP_002939386
I
0.819
XP_002939387
Xenopus tropicalis
XP_002939387
I
0.819
runx1.L
Xenopus laevis
XB-GENE-864949
I
0.819
ENSSHAG00000014782
Sarcophilus harrisii
ENSSHAG00000014782
I
0.819
ENSOARG00000013599
Ovis aries
ENSOARG00000013599
I
0.819
ENSOPRG00000000765
Ochotona princeps
ENSOPRG00000000765
I
0.819
runx3
Tetraodon nigroviridis
ENSTNIG00000016911
I
0.819
RUNX1
Pteropus vampyrus
ENSPVAG00000001606
I
0.819
RUNX1
Equus caballus
ENSECAG00000003462
I
0.810
Afo_R012718
Aptenodytes forsteri
Afo_R012718
I
0.810
RUNX1
Dasypus novemcinctus
ENSDNOG00000015041
I
0.810
ENSMPUG00000001340
Mustela putorius furo
ENSMPUG00000001340
I
0.810
Runx1
Mus musculus
ENSMUSG00000022952
D
0.806
ENSLACG00000013776
Latimeria chalumnae
ENSLACG00000013776
I
0.800
MESCA007079
Megaselia scalaris
MESCA007079
I
0.800
Aan_R002212
Calypte anna
Aan_R002212
I
0.796
ENSAMXG00000012244
Astyanax mexicanus
ENSAMXG00000012244
I
0.790
ENSTSYG00000005097
Tarsius syrichta
ENSTSYG00000005097
I
0.790
ENSTNIG00000018690
Tetraodon nigroviridis
ENSTNIG00000018690
I
0.790
RUNX1
Tursiops truncatus
ENSTTRG00000014160
I
0.790
ENSMGAG00000014534
Meleagris gallopavo
ENSMGAG00000014534
I
0.790
RUNX1
Gasterosteus aculeatus
ENSGACG00000015276
I
0.790
ENSMPUG00000012508
Mustela putorius furo
ENSMPUG00000012508
I
0.784
ENSNLEG00000003611
Nomascus leucogenys
ENSNLEG00000003611
I
0.783
runx1
Takifugu rubripes
ENSTRUG00000012611
I
0.781
ENSLACG00000015930
Latimeria chalumnae
ENSLACG00000015930
I
0.771
ACEP16400
Atta cephalotes
ACEP16400
I
0.762
Sakowv30005496m.g
Saccoglossus kowalevskii
Sakowv30005496m.g
I
0.762
Gfo_R011596
Geospiza fortis
Gfo_R011596
I
0.744
LCUP002656
Lucilia cuprina
LCUP002656
I
0.738
MESCA007078
Megaselia scalaris
MESCA007078
I
0.730
AALB007752
Anopheles albimanus
AALB007752
I
0.725
AQUA009446
Anopheles quadriannulatus
AQUA009446
I
0.720
AMAM011616
Anopheles maculatus
AMAM011616
I
0.720
ASTEI07771
Anopheles stephensi
ASTEI07771
I
0.714
AAEL006160
Aedes aegypti
AAEL006160
I
0.714
AATE002063
Anopheles atroparvus
AATE002063
I
0.714
RPRC005391
Rhodnius prolixus
RPRC005391
I
0.714
ENSOARG00000010358
Ovis aries
ENSOARG00000010358
I
0.713
CPIJ016825
Culex quinquefasciatus
CPIJ016825
I
0.711
CpipJ_CPIJ016825
Culex pipiens
CpipJ_CPIJ016825
I
0.711
PPAI006591
Phlebotomus papatasi
PPAI006591
I
0.708
Myotis_brandtii_RUNX2_10026084
Myotis brandtii
Myotis_brandtii_RUNX2_10026084
I
0.708
Hsal_12319--XP_394016.2_APIME
Harpegnathos saltator
Hsal_12319--XP_394016.2_APIME
I
0.705
TC006536
Tribolium castaneum
TC006536
I
0.705
SINV13317
Solenopsis invicta
SINV13317
I
0.705
Cflo_03909--XP_394016.2_APIME
Camponotus floridanus
Cflo_03909--XP_394016.2_APIME
I
0.705
tetur01g02340
Tetranychus urticae
tetur01g02340
I
0.705
Cflo_03911--XP_394014.2_APIME
Camponotus floridanus
Cflo_03911--XP_394014.2_APIME
I
0.705
KGM_21065
Danaus plexippus
KGM_21065
I
0.700
HMEL014739
Heliconius melpomene
HMEL014739
I
0.700
Pvit_17193
Pogona vitticeps
Pvit_17193
I
0.700