ENSP00000352514 (Macaca fascicularis)
Runt

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00853 (Runt) IPR013524 ENSP00000352514 T319658_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Runx2
M01307_2.00
Mus musculus
NHDACCRCAN

NTGYGGTHDN
PBM
Lambert et al.(2019)
pTH9764
0.876 0.876
RUNX2
M03468_2.00
Homo sapiens
HRACCGCAAACCRCRD

HYGYGGTTTGCGGTYD
SELEX
Jolma et al.(2013)
RUNX2_1
0.876 0.876
RUNX2
M03469_2.00
Homo sapiens
HRACCRCADWWACCRCAD

HTGYGGTWWHTGYGGTYD
SELEX
Jolma et al.(2013)
RUNX2_2
0.876 0.876
RUNX2
M03470_2.00
Homo sapiens
WAACCRCAR

YTGYGGTTW
SELEX
Jolma et al.(2013)
RUNX2_3
0.876 0.876
RUNX2
M05733_2.00
Homo sapiens
NHRACCRCADWAACCRCAVN

NBTGYGGTTWHTGYGGTYDN
SELEX
Yin et al.(2017)
RUNX2_eDBD_HT-SELEX
0.876 0.876
RUNX2
M09370_2.00
Homo sapiens
MMHAACCACAVVMH

DKBBTGTGGTTDKK
Misc
Kulakovskiy et al.(2013)
RUNX2_HUMAN.H11MO.0.A
0.876 0.876
Runx2
M09373_2.00
Mus musculus
VWRACCACARVV

BBYTGTGGTYWB
Misc
Kulakovskiy et al.(2013)
RUNX2_MOUSE.H11MO.0.A
0.876 0.876
RUNX2
M09630_2.00
Homo sapiens
NHVACCACANNN

NNNTGTGGTBDN
Misc
Heinz et al.(2010)
PCa-RUNX2_GSE33889
0.876 0.876
RUNX2
M11255_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML3_Q3
0.876 0.876
RUNX2
M11256_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML3_Q6
0.876 0.876
RUNX2
M11257_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$OSF2_Q6
0.876 0.876
RUNX2
M05734_2.00
Homo sapiens
NWAACCACRAAAACCACRRN

NYYGTGGTTTTYGTGGTTWN
SELEX
Yin et al.(2017)
RUNX2_eDBD_Methyl-HT-SELEX
0.876 0.876
RUNX3
M03464_2.00
Homo sapiens
HRACCGCAAACCRCAN

NTGYGGTTTGCGGTYD
SELEX
Jolma et al.(2013)
RUNX3_1
0.857 0.857
RUNX3
M03465_2.00
Homo sapiens
WAACCRCARN

NYTGYGGTTW
SELEX
Jolma et al.(2013)
RUNX3_2
0.857 0.857
RUNX3
M03466_2.00
Homo sapiens
HDACCRCADWAACCRCRN

NYGYGGTTWHTGYGGTHD
SELEX
Jolma et al.(2013)
RUNX3_3
0.857 0.857
RUNX3
M03467_2.00
Homo sapiens
HRACCRCAAH

DTTGYGGTYD
SELEX
Jolma et al.(2013)
RUNX3_4
0.857 0.857
RUNX3
M02751_2.00
Homo sapiens
WACCRCAM

KTGYGGTW
SELEX
Jolma et al.(2010)
RUNX3_monomer
0.857 0.857
RUNX3
M05731_2.00
Homo sapiens
YWAACCGCAAAAACCGCARV

BYTGCGGTTTTTGCGGTTWR
SELEX
Yin et al.(2017)
RUNX3_FL_HT-SELEX
0.857 0.857
RUNX3
M09369_2.00
Homo sapiens
HAACCACARN

NYTGTGGTTD
Misc
Kulakovskiy et al.(2013)
RUNX3_HUMAN.H11MO.0.A
0.857 0.857
Runx3
M09374_2.00
Mus musculus
NHRACCACARVN

NBYTGTGGTYDN
Misc
Kulakovskiy et al.(2013)
RUNX3_MOUSE.H11MO.0.A
0.857 0.857
RUNX3
M11252_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML2_Q3_01
0.857 0.857
RUNX3
M11253_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML2_Q3
0.857 0.857
RUNX3
M11254_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML2_Q4
0.857 0.857
RUNX3
M05732_2.00
Homo sapiens
HWAACCACRAAAACCACRARN

NYTYGTGGTTTTYGTGGTTWD
SELEX
Yin et al.(2017)
RUNX3_FL_Methyl-HT-SELEX
0.857 0.857
Runx1
M08163_2.00
Mus musculus
HRRCCACARVN

NBYTGTGGYYD
ChIP-seq
Mathelier et al.(2014)
MA0002.2
0.819 0.819
RUNX1
M09371_2.00
Homo sapiens
NWAACCACARV

BYTGTGGTTWN
Misc
Kulakovskiy et al.(2013)
RUNX1_HUMAN.H11MO.0.A
0.819 0.819
Runx1
M09372_2.00
Mus musculus
VWRACCACARVV

BBYTGTGGTYWB
Misc
Kulakovskiy et al.(2013)
RUNX1_MOUSE.H11MO.0.A
0.819 0.819
RUNX1
M09632_2.00
Homo sapiens
HAACCACADV

BHTGTGGTTD
Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE29180
0.819 0.819
RUNX1
M09631_2.00
Homo sapiens
VCCACWTCCTBY

RVAGGAWGTGGB
Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE17954
0.819 0.819
Runx1
M09633_2.00
Mus musculus
NWAACCACAR

YTGTGGTTWN
Misc
Heinz et al.(2010)
HPC7-Runx1_GSE22178
0.819 0.819
RUNX1
M11258_2.00
Homo sapiens
ACCRCA

TGYGGT
Transfac
Matys et al.(2006)
V$AML1_01
0.819 0.819
RUNX1
M11259_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q4_01
0.819 0.819
RUNX1
M11260_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q4_02
0.819 0.819
RUNX1
M11261_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q4
0.819 0.819
RUNX1
M11262_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q5
0.819 0.819
RUNX1
M11263_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q6
0.819 0.819
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSP00000352514 Runt 72 177

Links

Other Runt family TFs
Other Macaca fascicularis TFs

137 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AMTR_s00065p00184910 Amborella trichopoda AMTR_s00065p00184910 I 0.000
Aquca_016_00200 Aquilegia coerulea Aquca_016_00200 I 0.000
LRL2 Arabidopsis lyrata fgenesh2_kg.7__1084__AT4G30980.1 I 0.000
LRL3 Arabidopsis lyrata fgenesh1_pm.C_scaffold_8001435 I 0.000
LRL1 Arabidopsis lyrata fgenesh2_kg.4__341__AT2G24260.1 I 0.000
BHLH66 Arabidopsis thaliana AT2G24260 I 0.000
LRL2 Arabidopsis thaliana AT4G30980 D 0.000
BHLH82 Arabidopsis thaliana AT5G58010 I 0.000
Bostr.26833s0448 Boechera stricta Bostr.26833s0448 I 0.000
Bostr.7867s0954 Boechera stricta Bostr.7867s0954 I 0.000
Bostr.27895s0056 Boechera stricta Bostr.27895s0056 I 0.000
BRADI4G30350 Brachypodium distachyon BRADI4G30350 I 0.000
BRADI1G47350 Brachypodium distachyon BRADI1G47350 I 0.000
Bo9g133640 Brassica oleracea Bo9g133640 I 0.000
Bo8g099910 Brassica oleracea Bo8g099910 I 0.000
Bo3g018990 Brassica oleracea Bo3g018990 I 0.000
Bo2g028920 Brassica oleracea Bo2g028920 I 0.000
Bo1g011740 Brassica oleracea Bo1g011740 I 0.000
Bo4g154370 Brassica oleracea Bo4g154370 I 0.000
Bra032111 Brassica rapa Bra032111 I 0.000
Bra020398 Brassica rapa Bra020398 I 0.000
Bra011237 Brassica rapa Bra011237 I 0.000
Bra007863 Brassica rapa Bra007863 I 0.000
Bra006788 Brassica rapa Bra006788 I 0.000
Bra002679 Brassica rapa Bra002679 I 0.000
PK14040.1 Cannabis sativa PK14040.1 I 0.000
Cagra.4091s0032 Capsella grandiflora Cagra.4091s0032 I 0.000
Cagra.2848s0086 Capsella grandiflora Cagra.2848s0086 I 0.000
Cagra.0380s0028 Capsella grandiflora Cagra.0380s0028 I 0.000
Carubv10005248m.g Capsella rubella Carubv10005248m.g I 0.000
Carubv10028492m.g Capsella rubella Carubv10028492m.g I 0.000
Carubv10023532m.g Capsella rubella Carubv10023532m.g I 0.000
evm.TU.contig_30708.1 Carica papaya evm.TU.contig_30708.1 I 0.000
Ca_03340 Cicer arietinum Ca_03340 I 0.000
Cla013823 Citrullus lanatus Cla013823 I 0.000
Cla019007 Citrullus lanatus Cla019007 I 0.000
Ciclev10008192m.g Citrus clementina Ciclev10008192m.g I 0.000
orange1.1g012156m.g Citrus sinensis orange1.1g012156m.g I 0.000
Cucsa.350940 Cucumis sativus Cucsa.350940 I 0.000
Cucsa.132830 Cucumis sativus Cucsa.132830 I 0.000
Eucgr.C00360 Eucalyptus grandis Eucgr.C00360 I 0.000
Eucgr.C02592 Eucalyptus grandis Eucgr.C02592 I 0.000
Thhalv10000220m.g Eutrema salsugineum Thhalv10000220m.g I 0.000
Thhalv10025656m.g Eutrema salsugineum Thhalv10025656m.g I 0.000
Thhalv10014212m.g Eutrema salsugineum Thhalv10014212m.g I 0.000
gene10062-v1.0-hybrid Fragaria vesca gene10062-v1.0-hybrid I 0.000
GLYMA17G08300 Glycine max GLYMA17G08300 I 0.000
GLYMA15G33020 Glycine max GLYMA15G33020 I 0.000
GLYMA09G14380 Glycine max GLYMA09G14380 I 0.000
GLYMA02G36380 Glycine max GLYMA02G36380 I 0.000
Gorai.009G055200 Gossypium raimondii Gorai.009G055200 I 0.000
MLOC_38567 Hordeum vulgare MLOC_38567 I 0.000
LPERR09G07210 Leersia perrieri LPERR09G07210 I 0.000
LPERR02G29460 Leersia perrieri LPERR02G29460 I 0.000
Lus10021846.g Linum usitatissimum Lus10021846.g I 0.000
chr6.CM0037.770.nc Lotus japonicus chr6.CM0037.770.nc I 0.000
MDP0000534784 Malus domestica MDP0000534784 I 0.000
MDP0000121522 Malus domestica MDP0000121522 I 0.000
cassava22165.valid.m1 Manihot esculenta cassava22165.valid.m1 I 0.000
cassava22164.valid.m1 Manihot esculenta cassava22164.valid.m1 I 0.000
MTR_4g131160 Medicago truncatula MTR_4g131160 I 0.000
mgf009435m Mimulus guttatus mgf009435m I 0.000
mgf014585m Mimulus guttatus mgf014585m I 0.000
mgf001459m Mimulus guttatus mgf001459m I 0.000
GSMUA_Achr10G24090_001 Musa acuminata GSMUA_Achr10G24090_001 I 0.000
GSMUA_Achr4G01910_001 Musa acuminata GSMUA_Achr4G01910_001 I 0.000
GSMUA_Achr10G30710_001 Musa acuminata GSMUA_Achr10G30710_001 I 0.000
OBART06G05420 Oryza barthii OBART06G05420 I 0.000
OBART09G10360 Oryza barthii OBART09G10360 I 0.000
OB09G16940 Oryza brachyantha OB09G16940 I 0.000
OB06G14990 Oryza brachyantha OB06G14990 I 0.000
ORGLA09G0076200 Oryza glaberrima ORGLA09G0076200 I 0.000
ORGLA02G0311000 Oryza glaberrima ORGLA02G0311000 I 0.000
OGLUM09G10750 Oryza glumaepatula OGLUM09G10750 I 0.000
OGLUM06G05610 Oryza glumaepatula OGLUM06G05610 I 0.000
OGLUM02G37030 Oryza glumaepatula OGLUM02G37030 I 0.000
BGIOSGA029759 Oryza indica BGIOSGA029759 I 0.000
BGIOSGA021777 Oryza indica BGIOSGA021777 I 0.000
OMERI09G08190 Oryza meridionalis OMERI09G08190 I 0.000
OMERI02G33790 Oryza meridionalis OMERI02G33790 I 0.000
ONIVA02G37880 Oryza nivara ONIVA02G37880 I 0.000
ONIVA09G10010 Oryza nivara ONIVA09G10010 I 0.000
ONIVA06G06250 Oryza nivara ONIVA06G06250 I 0.000
ORUFI06G05560 Oryza rufipogon ORUFI06G05560 I 0.000
ORUFI02G37320 Oryza rufipogon ORUFI02G37320 I 0.000
OS06G0184000 Oryza sativa OS06G0184000 I 0.000
Pavir.J04712 Panicum virgatum Pavir.J04712 I 0.000
Pavir.Aa00205 Panicum virgatum Pavir.Aa00205 I 0.000
Pavir.Ab03158 Panicum virgatum Pavir.Ab03158 I 0.000
Pavir.Ba01914 Panicum virgatum Pavir.Ba01914 I 0.000
Pavir.Bb02117 Panicum virgatum Pavir.Bb02117 I 0.000
Pavir.Da02078 Panicum virgatum Pavir.Da02078 I 0.000
e_gw1.209.40.1 Physcomitrella patens e_gw1.209.40.1 D 0.000
e_gw1.173.38.1 Physcomitrella patens e_gw1.173.38.1 I 0.000
POPTR_0018s11800 Populus trichocarpa POPTR_0018s11800 I 0.000
Pm027715 Prunus mume Pm027715 I 0.000
PRUPE_ppa005254mg Prunus persica PRUPE_ppa005254mg I 0.000
29737.m001209 Ricinus communis 29737.m001209 I 0.000
SapurV1A.0347s0080 Salix purpurea SapurV1A.0347s0080 I 0.000
SapurV1A.0100s0120 Salix purpurea SapurV1A.0100s0120 I 0.000
SELMODRAFT_444782 Selaginella moellendorffii SELMODRAFT_444782 I 0.000
SELMODRAFT_422025 Selaginella moellendorffii SELMODRAFT_422025 I 0.000
Si017553m.g Setaria italica Si017553m.g I 0.000
Si029708m.g Setaria italica Si029708m.g I 0.000
Solyc12g010170.1 Solanum lycopersicum Solyc12g010170.1 I 0.000
PGSC0003DMG400007827 Solanum tuberosum PGSC0003DMG400007827 I 0.000
PGSC0003DMG400011133 Solanum tuberosum PGSC0003DMG400011133 I 0.000
Sb04g035890 Sorghum bicolor Sb04g035890 I 0.000
Sb10g005650 Sorghum bicolor Sb10g005650 I 0.000
Sb02g024750 Sorghum bicolor Sb02g024750 I 0.000
TCM_037077 Theobroma cacao TCM_037077 I 0.000
Traes_6AL_FD6EC5EA9 Triticum aestivum Traes_6AL_FD6EC5EA9 I 0.000
Traes_5BL_B820523A7 Triticum aestivum Traes_5BL_B820523A7 I 0.000
TRIUR3_33768 Triticum urartu TRIUR3_33768 I 0.000
VIT_11s0037g00040 Vitis vinifera VIT_11s0037g00040 I 0.000
GRMZM2G067654 Zea mays GRMZM2G067654 I 0.000
GRMZM2G027563 Zea mays GRMZM2G027563 I 0.000