CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CLEC011122
(
Cimex lectularius
)
Runt
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00853 (Runt)
IPR013524
CLEC011122
T319681_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
run
M06444_2.00
Drosophila melanogaster
WAACCGCAR
YTGCGGTTW
B1H
Zhu et al.(2011)
run_Bgb_NBT_FBgn0003300
0.800
0.800
lz
M03964_2.00
Drosophila melanogaster
HRACCGCAAHM
KDTTGCGGTYD
SELEX
Nitta et al.(2015)
lz_1
0.723
0.723
lz
M03965_2.00
Drosophila melanogaster
HVACCRCARWAACCRCAV
BTGYGGTTWYTGYGGTBD
SELEX
Nitta et al.(2015)
lz_2
0.723
0.723
lz
M03966_2.00
Drosophila melanogaster
WRACCRCAWTAACCRCAA
TTGYGGTTAWTGYGGTYW
SELEX
Nitta et al.(2015)
lz_3
0.723
0.723
lz
M03967_2.00
Drosophila melanogaster
HRACCGCAAAACCRCAR
YTGYGGTTTTGCGGTYD
SELEX
Nitta et al.(2015)
lz_4
0.723
0.723
RUNX3
M03464_2.00
Homo sapiens
HRACCGCAAACCRCAN
NTGYGGTTTGCGGTYD
SELEX
Jolma et al.(2013)
RUNX3_1
0.700
0.700
RUNX3
M03465_2.00
Homo sapiens
WAACCRCARN
NYTGYGGTTW
SELEX
Jolma et al.(2013)
RUNX3_2
0.700
0.700
RUNX3
M03466_2.00
Homo sapiens
HDACCRCADWAACCRCRN
NYGYGGTTWHTGYGGTHD
SELEX
Jolma et al.(2013)
RUNX3_3
0.700
0.700
RUNX3
M03467_2.00
Homo sapiens
HRACCRCAAH
DTTGYGGTYD
SELEX
Jolma et al.(2013)
RUNX3_4
0.700
0.700
RUNX3
M02751_2.00
Homo sapiens
WACCRCAM
KTGYGGTW
SELEX
Jolma et al.(2010)
RUNX3_monomer
0.700
0.700
RUNX3
M05731_2.00
Homo sapiens
YWAACCGCAAAAACCGCARV
BYTGCGGTTTTTGCGGTTWR
SELEX
Yin et al.(2017)
RUNX3_FL_HT-SELEX
0.700
0.700
RUNX3
M09369_2.00
Homo sapiens
HAACCACARN
NYTGTGGTTD
Misc
Kulakovskiy et al.(2013)
RUNX3_HUMAN.H11MO.0.A
0.700
0.700
Runx3
M09374_2.00
Mus musculus
NHRACCACARVN
NBYTGTGGTYDN
Misc
Kulakovskiy et al.(2013)
RUNX3_MOUSE.H11MO.0.A
0.700
0.700
RUNX3
M11252_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML2_Q3_01
0.700
0.700
RUNX3
M11253_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML2_Q3
0.700
0.700
RUNX3
M11254_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML2_Q4
0.700
0.700
RUNX3
M05732_2.00
Homo sapiens
HWAACCACRAAAACCACRARN
NYTYGTGGTTTTYGTGGTTWD
SELEX
Yin et al.(2017)
RUNX3_FL_Methyl-HT-SELEX
0.700
0.700
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CLEC011122-PA
Runt
19
148
VCSALSEHHGELIQTGSPSILCSALPNHWRSNKSLPAAFKVIALDDVNDGTVVTVRAGNDENYCAELRNCTAVMKNQVAKFNDLRFVGRSGRGKSFSLTIVIGSSPHQIAVYTKAIKVTVDGPREPRSKS
Links
Other
Runt
family TFs
Other
Cimex lectularius
TFs
217 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy