LDEC006645 (Leptinotarsa decemlineata)
Runt

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00853 (Runt) IPR013524 LDEC006645 T319695_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
run
M06444_2.00
Drosophila melanogaster
WAACCGCAR

YTGCGGTTW
B1H
Zhu et al.(2011)
run_Bgb_NBT_FBgn0003300
0.792 0.792
lz
M03964_2.00
Drosophila melanogaster
HRACCGCAAHM

KDTTGCGGTYD
SELEX
Nitta et al.(2015)
lz_1
0.723 0.723
lz
M03965_2.00
Drosophila melanogaster
HVACCRCARWAACCRCAV

BTGYGGTTWYTGYGGTBD
SELEX
Nitta et al.(2015)
lz_2
0.723 0.723
lz
M03966_2.00
Drosophila melanogaster
WRACCRCAWTAACCRCAA

TTGYGGTTAWTGYGGTYW
SELEX
Nitta et al.(2015)
lz_3
0.723 0.723
lz
M03967_2.00
Drosophila melanogaster
HRACCGCAAAACCRCAR

YTGYGGTTTTGCGGTYD
SELEX
Nitta et al.(2015)
lz_4
0.723 0.723
RUNX3
M03464_2.00
Homo sapiens
HRACCGCAAACCRCAN

NTGYGGTTTGCGGTYD
SELEX
Jolma et al.(2013)
RUNX3_1
0.708 0.708
RUNX3
M03465_2.00
Homo sapiens
WAACCRCARN

NYTGYGGTTW
SELEX
Jolma et al.(2013)
RUNX3_2
0.708 0.708
RUNX3
M03466_2.00
Homo sapiens
HDACCRCADWAACCRCRN

NYGYGGTTWHTGYGGTHD
SELEX
Jolma et al.(2013)
RUNX3_3
0.708 0.708
RUNX3
M03467_2.00
Homo sapiens
HRACCRCAAH

DTTGYGGTYD
SELEX
Jolma et al.(2013)
RUNX3_4
0.708 0.708
RUNX3
M02751_2.00
Homo sapiens
WACCRCAM

KTGYGGTW
SELEX
Jolma et al.(2010)
RUNX3_monomer
0.708 0.708
RUNX3
M05731_2.00
Homo sapiens
YWAACCGCAAAAACCGCARV

BYTGCGGTTTTTGCGGTTWR
SELEX
Yin et al.(2017)
RUNX3_FL_HT-SELEX
0.708 0.708
Runx1
M08163_2.00
Mus musculus
HRRCCACARVN

NBYTGTGGYYD
ChIP-seq
Mathelier et al.(2014)
MA0002.2
0.708 0.708
RUNX1
M09371_2.00
Homo sapiens
NWAACCACARV

BYTGTGGTTWN
Misc
Kulakovskiy et al.(2013)
RUNX1_HUMAN.H11MO.0.A
0.708 0.708
RUNX3
M09369_2.00
Homo sapiens
HAACCACARN

NYTGTGGTTD
Misc
Kulakovskiy et al.(2013)
RUNX3_HUMAN.H11MO.0.A
0.708 0.708
Runx1
M09372_2.00
Mus musculus
VWRACCACARVV

BBYTGTGGTYWB
Misc
Kulakovskiy et al.(2013)
RUNX1_MOUSE.H11MO.0.A
0.708 0.708
Runx3
M09374_2.00
Mus musculus
NHRACCACARVN

NBYTGTGGTYDN
Misc
Kulakovskiy et al.(2013)
RUNX3_MOUSE.H11MO.0.A
0.708 0.708
RUNX1
M09632_2.00
Homo sapiens
HAACCACADV

BHTGTGGTTD
Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE29180
0.708 0.708
RUNX1
M09631_2.00
Homo sapiens
VCCACWTCCTBY

RVAGGAWGTGGB
Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE17954
0.708 0.708
Runx1
M09633_2.00
Mus musculus
NWAACCACAR

YTGTGGTTWN
Misc
Heinz et al.(2010)
HPC7-Runx1_GSE22178
0.708 0.708
RUNX1
M11258_2.00
Homo sapiens
ACCRCA

TGYGGT
Transfac
Matys et al.(2006)
V$AML1_01
0.708 0.708
RUNX1
M11259_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q4_01
0.708 0.708
RUNX1
M11260_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q4_02
0.708 0.708
RUNX1
M11261_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q4
0.708 0.708
RUNX1
M11262_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q5
0.708 0.708
RUNX1
M11263_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q6
0.708 0.708
RUNX3
M11252_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML2_Q3_01
0.708 0.708
RUNX3
M11253_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML2_Q3
0.708 0.708
RUNX3
M11254_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML2_Q4
0.708 0.708
RUNX3
M05732_2.00
Homo sapiens
HWAACCACRAAAACCACRARN

NYTYGTGGTTTTYGTGGTTWD
SELEX
Yin et al.(2017)
RUNX3_FL_Methyl-HT-SELEX
0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LDEC006645-PA Runt 17 147

Links

Other Runt family TFs
Other Leptinotarsa decemlineata TFs

228 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AAEL006160 Aedes aegypti AAEL006160 I 0.754
AAEL006167 Aedes aegypti AAEL006167 I 0.785
AAEL007040 Aedes aegypti AAEL007040 I 0.754
AALB007752 Anopheles albimanus AALB007752 I 0.750
AALB007754 Anopheles albimanus AALB007754 I 0.808
AALB009220 Anopheles albimanus AALB009220 I 0.754
AARA004356 Anopheles arabiensis AARA004356 I 0.746
AARA011332 Anopheles arabiensis AARA011332 I 0.701
AARA011472 Anopheles arabiensis AARA011472 I 0.792
AATE002063 Anopheles atroparvus AATE002063 I 0.754
AATE017340 Anopheles atroparvus AATE017340 I 0.808
ACEP16400 Atta cephalotes ACEP16400 I 0.714
ACEP16410 Atta cephalotes ACEP16410 I 0.754
ACHR004078 Anopheles christyi ACHR004078 I 0.746
ACHR006341 Anopheles christyi ACHR006341 I 0.792
ACOM031089 Anopheles coluzzii ACOM031089 I 0.792
ACUA016618 Anopheles culicifacies ACUA016618 I 0.800
ACYPI001442 Acyrthosiphon pisum ACYPI001442 I 0.723
ACYPI006937 Acyrthosiphon pisum ACYPI006937 I 0.731
ACYPI007541 Acyrthosiphon pisum ACYPI007541 I 0.738
ADIR005600 Anopheles dirus ADIR005600 I 0.800
AEPI003479 Anopheles epiroticus AEPI003479 I 0.746
AEPI010884 Anopheles epiroticus AEPI010884 I 0.800
AFAF000166 Anopheles farauti AFAF000166 I 0.800
AFUN010423 Anopheles funestus AFUN010423 I 0.800
AGAP001094 Anopheles gambiae AGAP001094 I 0.792
AGAP002506 Anopheles gambiae AGAP002506 I 0.746
AMAM011616 Anopheles maculatus AMAM011616 I 0.720
AMAM016300 Anopheles maculatus AMAM016300 I 0.800
AMEC007551 Anopheles melas AMEC007551 I 0.792
AMEM004753 Anopheles merus AMEM004753 I 0.792
AMEM017856 Anopheles merus AMEM017856 I 0.746
AMIN002518 Anopheles minimus AMIN002518 I 0.746
AMIN005759 Anopheles minimus AMIN005759 I 0.800
AQUA009970 Anopheles quadriannulatus AQUA009970 I 0.792
ASIS001308 Anopheles sinensis ASIS001308 I 0.808
ASTEI07770 Anopheles stephensi ASTEI07770 I 0.800
ASTEI07771 Anopheles stephensi ASTEI07771 I 0.754
ASTEI07959 Anopheles stephensi ASTEI07959 I 0.746
BGIBMGA008906 Bombyx mori BGIBMGA008906 I 0.808
Cflo_03909--XP_394016.2_APIME Camponotus floridanus Cflo_03909--XP_394016.2_APIME I 0.715
Cflo_03910--XP_001121886.1_APIME Camponotus floridanus Cflo_03910--XP_001121886.1_APIME I 0.769
Cflo_03911--XP_394014.2_APIME Camponotus floridanus Cflo_03911--XP_394014.2_APIME I 0.715
CLEC011122 Cimex lectularius CLEC011122 I 0.815
Cmyd_10020845 Chelonia mydas Cmyd_10020845 I 0.715
Cmyd_10021516 Chelonia mydas Cmyd_10021516 I 0.708
CPIJ001309 Culex quinquefasciatus CPIJ001309 I 0.769
CpipJ_CPIJ001309 Culex pipiens CpipJ_CPIJ001309 I 0.769
DAPPUDRAFT_290554 Daphnia pulex DAPPUDRAFT_290554 I 0.715
RUNX3 Anolis carolinensis ENSACAG00000017855 I 0.750
ENSAMEG00000005325 Ailuropoda melanoleuca ENSAMEG00000005325 I 0.708
ENSAMEG00000010102 Ailuropoda melanoleuca ENSAMEG00000010102 I 0.708
ENSAMXG00000000881 Astyanax mexicanus ENSAMXG00000000881 I 0.708
ENSAMXG00000004048 Astyanax mexicanus ENSAMXG00000004048 I 0.708
ENSAPLG00000016439 Anas platyrhynchos ENSAPLG00000016439 I 0.715
RUNX1 Bos taurus ENSBTAG00000004742 I 0.700
RUNX1 Canis familiaris ENSCAFG00000009596 I 0.708
RUNX3 Canis familiaris ENSCAFG00000012903 I 0.708
RUNX1 Callithrix jacchus ENSCJAG00000002816 I 0.708
RUNX3 Callithrix jacchus ENSCJAG00000020815 I 0.708
ENSCPOG00000000551 Cavia porcellus ENSCPOG00000000551 I 0.708
ENSCPOG00000002684 Cavia porcellus ENSCPOG00000002684 I 0.700
ENSCSAG00000000947 Chlorocebus sabaeus ENSCSAG00000000947 I 0.708
ENSCSAG00000008703 Chlorocebus sabaeus ENSCSAG00000008703 I 0.708
runx2a Danio rerio ENSDARG00000040261 I 0.700
runx3 Danio rerio ENSDARG00000052826 I 0.708
RUNX1 Dasypus novemcinctus ENSDNOG00000015041 I 0.708
RUNX3 Dasypus novemcinctus ENSDNOG00000043493 I 0.715
Runx1 Dipodomys ordii ENSDORG00000004347 I 0.708
RUNX1 Equus caballus ENSECAG00000003462 I 0.708
ENSFALG00000000025 Ficedula albicollis ENSFALG00000000025 I 0.708
ENSFALG00000000470 Ficedula albicollis ENSFALG00000000470 I 0.715
RUNX3 Felis catus ENSFCAG00000000680 I 0.708
RUNX3 Homo sapiens ENSG00000020633 D 0.708
RUNX1 Homo sapiens ENSG00000159216 D 0.708
runx3 Gasterosteus aculeatus ENSGACG00000007301 I 0.708
RUNX1 Gallus gallus ENSGALG00000016022 I 0.708
ENSGALG00000026821 Gallus gallus ENSGALG00000026821 I 0.715
RUNX3 Gorilla gorilla ENSGGOG00000004848 I 0.708
RUNX1 Gorilla gorilla ENSGGOG00000012862 I 0.708
ENSGMOG00000019132 Gadus morhua ENSGMOG00000019132 I 0.708
ENSLACG00000015930 Latimeria chalumnae ENSLACG00000015930 I 0.708
RUNX1 Loxodonta africana ENSLAFG00000004290 I 0.708
RUNX3 Loxodonta africana ENSLAFG00000008382 I 0.715
ENSLOCG00000002744 Lepisosteus oculatus ENSLOCG00000002744 I 0.708
ENSLOCG00000010990 Lepisosteus oculatus ENSLOCG00000010990 I 0.700
ENSMEUG00000014419 Macropus eugenii ENSMEUG00000014419 I 0.708
RUNX1 Microcebus murinus ENSMICG00000011998 I 0.708
RUNX1 Macaca mulatta ENSMMUG00000001649 I 0.715
RUNX3 Macaca mulatta ENSMMUG00000002420 I 0.708
ENSMODG00000013941 Monodelphis domestica ENSMODG00000013941 I 0.715
RUNX1 Monodelphis domestica ENSMODG00000021051 I 0.708
ENSMPUG00000001340 Mustela putorius furo ENSMPUG00000001340 I 0.708
Runx1 Mus musculus ENSMUSG00000022952 D 0.708
Runx3 Mus musculus ENSMUSG00000070691 D 0.708
ENSNLEG00000004310 Nomascus leucogenys ENSNLEG00000004310 I 0.708
ENSOANG00000031074 Ornithorhynchus anatinus ENSOANG00000031074 I 0.760
ENSOARG00000006421 Ovis aries ENSOARG00000006421 I 0.708
RUNX1 Oryctolagus cuniculus ENSOCUG00000013731 I 0.708
RUNX3 Oryctolagus cuniculus ENSOCUG00000017751 I 0.708
RUNX3 Otolemur garnettii ENSOGAG00000025633 I 0.708
RUNX1 Otolemur garnettii ENSOGAG00000033362 I 0.708
ENSONIG00000008210 Oreochromis niloticus ENSONIG00000008210 I 0.708
ENSOPRG00000000765 Ochotona princeps ENSOPRG00000000765 I 0.700
RUNX3 Ochotona princeps ENSOPRG00000011273 I 0.708
runx3 Oryzias latipes ENSORLG00000017515 I 0.708
ENSP00000300305 Macaca fascicularis ENSP00000300305 I 0.700
ENSP00000409227-D1 Bos grunniens ENSP00000409227-D1 I 0.700
ENSPANG00000007357 Papio anubis ENSPANG00000007357 I 0.708
ENSPANG00000008140 Papio anubis ENSPANG00000008140 I 0.708
RUNX1 Procavia capensis ENSPCAG00000016747 I 0.700
ENSPFOG00000003997 Poecilia formosa ENSPFOG00000003997 I 0.708
ENSPPYG00000001714 Pongo abelii ENSPPYG00000001714 I 0.708
ENSPPYG00000011394 Pongo abelii ENSPPYG00000011394 I 0.708
ENSPSIG00000012728 Pelodiscus sinensis ENSPSIG00000012728 I 0.715
ENSPSIG00000014293 Pelodiscus sinensis ENSPSIG00000014293 I 0.739
ENSPSIG00000017547 Pelodiscus sinensis ENSPSIG00000017547 I 0.708
RUNX3 Pan troglodytes ENSPTRG00000000351 I 0.708
RUNX1 Pan troglodytes ENSPTRG00000013883 I 0.708
RUNX1 Pteropus vampyrus ENSPVAG00000001606 I 0.708
Runx1 Rattus norvegicus ENSRNOG00000001704 I 0.708
Runx3 Rattus norvegicus ENSRNOG00000054217 I 0.708
ENSSHAG00000014782 Sarcophilus harrisii ENSSHAG00000014782 I 0.708
ENSSSCG00000012051 Sus scrofa ENSSSCG00000012051 I 0.708
ENSSTOG00000022471 Ictidomys tridecemlineatus ENSSTOG00000022471 I 0.708
RUNX3 Taeniopygia guttata ENSTGUG00000001130 I 0.715
runx3 Tetraodon nigroviridis ENSTNIG00000016911 I 0.708
runx3 Takifugu rubripes ENSTRUG00000001517 I 0.700
ENSTSYG00000005097 Tarsius syrichta ENSTSYG00000005097 I 0.715
RUNX3 Tursiops truncatus ENSTTRG00000009396 I 0.708
RUNX1 Tursiops truncatus ENSTTRG00000014160 I 0.708
ENSXMAG00000018835 Xiphophorus maculatus ENSXMAG00000018835 I 0.708
lz Drosophila melanogaster FBgn0002576 D 0.723
run Drosophila melanogaster FBgn0003300 D 0.792
run Drosophila pseudoobscura FBgn0013862 I 0.792
run Drosophila virilis FBgn0013920 I 0.792
run Drosophila simulans FBgn0016352 I 0.792
GA13742 Drosophila pseudoobscura FBgn0073778 I 0.731
RunxA Drosophila melanogaster FBgn0083981 I 0.715
run Drosophila yakuba FBgn0084618 I 0.792
run Drosophila erecta FBgn0085118 I 0.792
GF15967 Drosophila ananassae FBgn0092990 I 0.731
GF15970 Drosophila ananassae FBgn0092993 I 0.792
GF15983 Drosophila ananassae FBgn0093006 I 0.715
GG17578 Drosophila erecta FBgn0109803 I 0.715
GG18309 Drosophila erecta FBgn0110525 I 0.723
GG19691 Drosophila erecta FBgn0111893 I 0.731
GH17737 Drosophila grimshawi FBgn0125207 I 0.731
GH17740 Drosophila grimshawi FBgn0125210 I 0.792
GH17774 Drosophila grimshawi FBgn0125244 I 0.715
GI14398 Drosophila mojavensis FBgn0137150 I 0.738
GI15119 Drosophila mojavensis FBgn0137869 I 0.715
GI15491 Drosophila mojavensis FBgn0138240 I 0.792
GL15800 Drosophila persimilis FBgn0153404 I 0.731
GL15806 Drosophila persimilis FBgn0153410 I 0.792
GL15927 Drosophila persimilis FBgn0153531 I 0.715
GL16499 Drosophila persimilis FBgn0154103 I 0.723
GM22478 Drosophila sechellia FBgn0177348 I 0.723
GM22662 Drosophila sechellia FBgn0177532 I 0.715
GM23044 Drosophila sechellia FBgn0177912 I 0.731
GM23050 Drosophila sechellia FBgn0177918 I 0.792
GD17495 Drosophila simulans FBgn0189047 I 0.731
GJ18742 Drosophila virilis FBgn0205894 I 0.738
GJ18917 Drosophila virilis FBgn0206063 I 0.715
GJ19245 Drosophila virilis FBgn0206390 I 0.731
GK19810 Drosophila willistoni FBgn0221808 I 0.731
GK19815 Drosophila willistoni FBgn0221813 I 0.792
GK20052 Drosophila willistoni FBgn0222049 I 0.715
GK25373 Drosophila willistoni FBgn0227332 I 0.738
GE15340 Drosophila yakuba FBgn0232921 I 0.715
GE17788 Drosophila yakuba FBgn0235232 I 0.723
GE17890 Drosophila yakuba FBgn0235328 I 0.731
GA22609 Drosophila pseudoobscura FBgn0244012 I 0.723
GA25684 Drosophila pseudoobscura FBgn0247061 I 0.715
RunxB Drosophila melanogaster FBgn0259162 I 0.731
GB52718 Apis mellifera GB52718 I 0.700
GB52719 Apis mellifera GB52719 I 0.792
GB52721 Apis mellifera GB52721 I 0.715
GB52761 Apis mellifera GB52761 I 0.708
Gfo_R011596 Geospiza fortis Gfo_R011596 I 0.702
Hsal_12319--XP_394016.2_APIME Harpegnathos saltator Hsal_12319--XP_394016.2_APIME I 0.715
Hsal_12321--XP_001121886.1_APIME Harpegnathos saltator Hsal_12321--XP_001121886.1_APIME I 0.754
Hsal_12322--XP_394014.2_APIME Harpegnathos saltator Hsal_12322--XP_394014.2_APIME I 0.708
KGM_21067 Danaus plexippus KGM_21067 I 0.777
KGM_21075 Danaus plexippus KGM_21075 I 0.731
L798_10922 Zootermopsis nevadensis L798_10922 I 0.831
LCUP002659 Lucilia cuprina LCUP002659 I 0.792
LLOJ002717 Lutzomyia longipalpis LLOJ002717 I 0.715
MCINX000302 Melitaea cinxia MCINX000302 I 0.708
MCINX005905 Melitaea cinxia MCINX005905 I 0.769
MDOA009046 Musca domestica MDOA009046 I 0.785
MDOA010744 Musca domestica MDOA010744 I 0.700
MDOA011942 Musca domestica MDOA011942 I 0.708
MDOA013149 Musca domestica MDOA013149 I 0.738
MESCA003521 Megaselia scalaris MESCA003521 I 0.746
MESCA007078 Megaselia scalaris MESCA007078 I 0.757
NV10998 Nasonia vitripennis NV10998 I 0.700
NV11000 Nasonia vitripennis NV11000 I 0.715
NV17759 Nasonia vitripennis NV17759 I 0.785
NV17793 Nasonia vitripennis NV17793 I 0.708
Ogr17914 Ophisaurus gracilis Ogr17914 I 0.708
PHUM333300 Pediculus humanus PHUM333300 I 0.754
PHUM333310 Pediculus humanus PHUM333310 I 0.831
PHUM333320 Pediculus humanus PHUM333320 I 0.754
PHUM333340 Pediculus humanus PHUM333340 I 0.731
PPAI006591 Phlebotomus papatasi PPAI006591 I 0.792
PPAI010986 Phlebotomus papatasi PPAI010986 I 0.823
Pvit_04762 Pogona vitticeps Pvit_04762 I 0.708
Pvit_17193 Pogona vitticeps Pvit_17193 I 0.715
RPRC005391 Rhodnius prolixus RPRC005391 I 0.762
Sakowv30005496m.g Saccoglossus kowalevskii Sakowv30005496m.g I 0.723
SINV13317 Solenopsis invicta SINV13317 I 0.715
SINV13356 Solenopsis invicta SINV13356 I 0.769
SINV13363 Solenopsis invicta SINV13363 I 0.708
TC005566 Tribolium castaneum TC005566 I 0.746
TC005796 Tribolium castaneum TC005796 I 0.723
TC006536 Tribolium castaneum TC006536 I 0.746
TC006542 Tribolium castaneum TC006542 I 0.892
tetur01g02340 Tetranychus urticae tetur01g02340 I 0.708
TriadG25179 Trichoplax adhaerens TriadG25179 I 0.715
runx3 Xenopus tropicalis XB-GENE-487784 I 0.715
runx3.L Xenopus laevis XB-GENE-6487158 I 0.723
runx1.L Xenopus laevis XB-GENE-864949 I 0.700
XP_002939386 Xenopus tropicalis XP_002939386 I 0.708
XP_002939387 Xenopus tropicalis XP_002939387 I 0.708
XP_002939388 Xenopus tropicalis XP_002939388 I 0.708
YQE_12214 Dendroctonus ponderosae YQE_12214 N 0.723
YQE_12218 Dendroctonus ponderosae YQE_12218 I 0.723