LDEC006650 (Leptinotarsa decemlineata)
Runt

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00853 (Runt) IPR013524 LDEC006650 T319696_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RUNX3
M03464_2.00
Homo sapiens
HRACCGCAAACCRCAN

NTGYGGTTTGCGGTYD
SELEX
Jolma et al.(2013)
RUNX3_1
0.730 0.730
RUNX3
M03465_2.00
Homo sapiens
WAACCRCARN

NYTGYGGTTW
SELEX
Jolma et al.(2013)
RUNX3_2
0.730 0.730
RUNX3
M03466_2.00
Homo sapiens
HDACCRCADWAACCRCRN

NYGYGGTTWHTGYGGTHD
SELEX
Jolma et al.(2013)
RUNX3_3
0.730 0.730
RUNX3
M03467_2.00
Homo sapiens
HRACCRCAAH

DTTGYGGTYD
SELEX
Jolma et al.(2013)
RUNX3_4
0.730 0.730
RUNX3
M02751_2.00
Homo sapiens
WACCRCAM

KTGYGGTW
SELEX
Jolma et al.(2010)
RUNX3_monomer
0.730 0.730
RUNX3
M05731_2.00
Homo sapiens
YWAACCGCAAAAACCGCARV

BYTGCGGTTTTTGCGGTTWR
SELEX
Yin et al.(2017)
RUNX3_FL_HT-SELEX
0.730 0.730
RUNX3
M09369_2.00
Homo sapiens
HAACCACARN

NYTGTGGTTD
Misc
Kulakovskiy et al.(2013)
RUNX3_HUMAN.H11MO.0.A
0.730 0.730
Runx3
M09374_2.00
Mus musculus
NHRACCACARVN

NBYTGTGGTYDN
Misc
Kulakovskiy et al.(2013)
RUNX3_MOUSE.H11MO.0.A
0.730 0.730
RUNX3
M11252_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML2_Q3_01
0.730 0.730
RUNX3
M11253_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML2_Q3
0.730 0.730
RUNX3
M11254_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML2_Q4
0.730 0.730
RUNX3
M05732_2.00
Homo sapiens
HWAACCACRAAAACCACRARN

NYTYGTGGTTTTYGTGGTTWD
SELEX
Yin et al.(2017)
RUNX3_FL_Methyl-HT-SELEX
0.730 0.730
Runx1
M08163_2.00
Mus musculus
HRRCCACARVN

NBYTGTGGYYD
ChIP-seq
Mathelier et al.(2014)
MA0002.2
0.710 0.710
RUNX1
M09371_2.00
Homo sapiens
NWAACCACARV

BYTGTGGTTWN
Misc
Kulakovskiy et al.(2013)
RUNX1_HUMAN.H11MO.0.A
0.710 0.710
Runx1
M09372_2.00
Mus musculus
VWRACCACARVV

BBYTGTGGTYWB
Misc
Kulakovskiy et al.(2013)
RUNX1_MOUSE.H11MO.0.A
0.710 0.710
RUNX1
M09632_2.00
Homo sapiens
HAACCACADV

BHTGTGGTTD
Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE29180
0.710 0.710
RUNX1
M09631_2.00
Homo sapiens
VCCACWTCCTBY

RVAGGAWGTGGB
Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE17954
0.710 0.710
Runx1
M09633_2.00
Mus musculus
NWAACCACAR

YTGTGGTTWN
Misc
Heinz et al.(2010)
HPC7-Runx1_GSE22178
0.710 0.710
RUNX1
M11258_2.00
Homo sapiens
ACCRCA

TGYGGT
Transfac
Matys et al.(2006)
V$AML1_01
0.710 0.710
RUNX1
M11259_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q4_01
0.710 0.710
RUNX1
M11260_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q4_02
0.710 0.710
RUNX1
M11261_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q4
0.710 0.710
RUNX1
M11262_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q5
0.710 0.710
RUNX1
M11263_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q6
0.710 0.710
Runx2
M01307_2.00
Mus musculus
NHDACCRCAN

NTGYGGTHDN
PBM
Lambert et al.(2019)
pTH9764
0.700 0.700
RUNX2
M03468_2.00
Homo sapiens
HRACCGCAAACCRCRD

HYGYGGTTTGCGGTYD
SELEX
Jolma et al.(2013)
RUNX2_1
0.700 0.700
RUNX2
M03469_2.00
Homo sapiens
HRACCRCADWWACCRCAD

HTGYGGTWWHTGYGGTYD
SELEX
Jolma et al.(2013)
RUNX2_2
0.700 0.700
RUNX2
M03470_2.00
Homo sapiens
WAACCRCAR

YTGYGGTTW
SELEX
Jolma et al.(2013)
RUNX2_3
0.700 0.700
RUNX2
M05733_2.00
Homo sapiens
NHRACCRCADWAACCRCAVN

NBTGYGGTTWHTGYGGTYDN
SELEX
Yin et al.(2017)
RUNX2_eDBD_HT-SELEX
0.700 0.700
RUNX2
M09370_2.00
Homo sapiens
MMHAACCACAVVMH

DKBBTGTGGTTDKK
Misc
Kulakovskiy et al.(2013)
RUNX2_HUMAN.H11MO.0.A
0.700 0.700
Runx2
M09373_2.00
Mus musculus
VWRACCACARVV

BBYTGTGGTYWB
Misc
Kulakovskiy et al.(2013)
RUNX2_MOUSE.H11MO.0.A
0.700 0.700
RUNX2
M09630_2.00
Homo sapiens
NHVACCACANNN

NNNTGTGGTBDN
Misc
Heinz et al.(2010)
PCa-RUNX2_GSE33889
0.700 0.700
RUNX2
M11255_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML3_Q3
0.700 0.700
RUNX2
M11256_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML3_Q6
0.700 0.700
RUNX2
M11257_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$OSF2_Q6
0.700 0.700
RUNX2
M05734_2.00
Homo sapiens
NWAACCACRAAAACCACRRN

NYYGTGGTTTTYGTGGTTWN
SELEX
Yin et al.(2017)
RUNX2_eDBD_Methyl-HT-SELEX
0.700 0.700
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LDEC006650-PA Runt 41 140

Links

Other Runt family TFs
Other Leptinotarsa decemlineata TFs

209 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AARA011332 Anopheles arabiensis AARA011332 I 0.918
TC005566 Tribolium castaneum TC005566 I 0.910
AMEM009849 Anopheles merus AMEM009849 N 0.910
AFUN010424 Anopheles funestus AFUN010424 I 0.910
AMIN005760 Anopheles minimus AMIN005760 I 0.900
AMEC011614 Anopheles melas AMEC011614 I 0.900
ACUA002933 Anopheles culicifacies ACUA002933 I 0.900
AALB007753 Anopheles albimanus AALB007753 I 0.900
ASIS002518 Anopheles sinensis ASIS002518 I 0.900
AFAF002111 Anopheles farauti AFAF002111 I 0.900
LLOJ002049 Lutzomyia longipalpis LLOJ002049 I 0.899
HMEL009843 Heliconius melpomene HMEL009843 I 0.895
ASTEI07771 Anopheles stephensi ASTEI07771 I 0.890
AAEL006160 Aedes aegypti AAEL006160 I 0.890
AATE002063 Anopheles atroparvus AATE002063 I 0.890
CpipJ_CPIJ016826 Culex pipiens CpipJ_CPIJ016826 I 0.890
CPIJ016826 Culex quinquefasciatus CPIJ016826 I 0.890
ACHR007816 Anopheles christyi ACHR007816 I 0.890
AEPI011470 Anopheles epiroticus AEPI011470 I 0.880
PPAI010985 Phlebotomus papatasi PPAI010985 I 0.880
ADIR001029 Anopheles dirus ADIR001029 I 0.880
AQUA008686 Anopheles quadriannulatus AQUA008686 I 0.880
LCUP002657 Lucilia cuprina LCUP002657 I 0.850
MDOA011942 Musca domestica MDOA011942 I 0.850
BGIBMGA008970 Bombyx mori BGIBMGA008970 I 0.842
KGM_21075 Danaus plexippus KGM_21075 I 0.840
TC006536 Tribolium castaneum TC006536 I 0.830
LDEC020505 Leptinotarsa decemlineata LDEC020505 I 0.820
RPRC000026 Rhodnius prolixus RPRC000026 I 0.820
ACEP16397 Atta cephalotes ACEP16397 I 0.820
CLEC011123 Cimex lectularius CLEC011123 I 0.810
Cflo_03911--XP_394014.2_APIME Camponotus floridanus Cflo_03911--XP_394014.2_APIME I 0.810
CLEC011127 Cimex lectularius CLEC011127 I 0.810
YQE_12216 Dendroctonus ponderosae YQE_12216 I 0.809
NV11000 Nasonia vitripennis NV11000 I 0.800
KGM_02818 Danaus plexippus KGM_02818 I 0.790
ACYPI007541 Acyrthosiphon pisum ACYPI007541 I 0.790
AAEL007036 Aedes aegypti AAEL007036 I 0.790
Cflo_03913--XP_394013.3_APIME Camponotus floridanus Cflo_03913--XP_394013.3_APIME I 0.790
YQE_12218 Dendroctonus ponderosae YQE_12218 I 0.780
PHUM333340 Pediculus humanus PHUM333340 I 0.780
NV10998 Nasonia vitripennis NV10998 I 0.780
MCINX000302 Melitaea cinxia MCINX000302 I 0.770
SMAR009403 Strigamia maritima SMAR009403 I 0.770
ACEP16391 Atta cephalotes ACEP16391 I 0.770
TC005796 Tribolium castaneum TC005796 I 0.770
Hsal_04635--XP_394013.3_APIME Harpegnathos saltator Hsal_04635--XP_394013.3_APIME I 0.770
PHUM333300 Pediculus humanus PHUM333300 I 0.760
ACYPI001442 Acyrthosiphon pisum ACYPI001442 I 0.760
SINV13345 Solenopsis invicta SINV13345 I 0.760
CPIJ006369 Culex quinquefasciatus CPIJ006369 I 0.750
CpipJ_CPIJ006369 Culex pipiens CpipJ_CPIJ006369 I 0.750
ACEP16409 Atta cephalotes ACEP16409 I 0.750
Cflo_03909--XP_394016.2_APIME Camponotus floridanus Cflo_03909--XP_394016.2_APIME I 0.740
ENSSSCG00000025261 Sus scrofa ENSSSCG00000025261 I 0.740
Hsal_12319--XP_394016.2_APIME Harpegnathos saltator Hsal_12319--XP_394016.2_APIME I 0.740
RPRC005391 Rhodnius prolixus RPRC005391 I 0.740
SINV13317 Solenopsis invicta SINV13317 I 0.740
ENSLACG00000013776 Latimeria chalumnae ENSLACG00000013776 I 0.740
CLEC011122 Cimex lectularius CLEC011122 I 0.740
LDEC003023 Leptinotarsa decemlineata LDEC003023 I 0.740
HMEL014738 Heliconius melpomene HMEL014738 I 0.738
RUNX3 Callithrix jacchus ENSCJAG00000020815 I 0.730
runx3 Xenopus tropicalis XB-GENE-487784 I 0.730
RUNX3 Taeniopygia guttata ENSTGUG00000001130 I 0.730
ENSFALG00000000470 Ficedula albicollis ENSFALG00000000470 I 0.730
L798_10922 Zootermopsis nevadensis L798_10922 I 0.730
runx1 Danio rerio ENSDARG00000087646 I 0.730
ENSPSIG00000012728 Pelodiscus sinensis ENSPSIG00000012728 I 0.730
RUNX3 Dasypus novemcinctus ENSDNOG00000043493 I 0.730
ENSPPYG00000001714 Pongo abelii ENSPPYG00000001714 I 0.730
ENSAPLG00000016439 Anas platyrhynchos ENSAPLG00000016439 I 0.730
ENSGALG00000026821 Gallus gallus ENSGALG00000026821 I 0.730
Pvit_17193 Pogona vitticeps Pvit_17193 I 0.730
ENSMODG00000013941 Monodelphis domestica ENSMODG00000013941 I 0.730
RUNX3 Loxodonta africana ENSLAFG00000008382 I 0.730
Cmyd_10020845 Chelonia mydas Cmyd_10020845 I 0.730
Sakowv30005496m.g Saccoglossus kowalevskii Sakowv30005496m.g I 0.730
GD17495 Drosophila simulans FBgn0189047 I 0.720
GK19810 Drosophila willistoni FBgn0221808 I 0.720
RUNX1 Bos taurus ENSBTAG00000004742 I 0.720
ENSAMXG00000012244 Astyanax mexicanus ENSAMXG00000012244 I 0.720
GJ19245 Drosophila virilis FBgn0206390 I 0.720
RunxB Drosophila melanogaster FBgn0259162 I 0.720
CGI_10005366 Crassostrea gigas CGI_10005366 I 0.720
runx3 Tetraodon nigroviridis ENSTNIG00000016911 I 0.720
MDOA013149 Musca domestica MDOA013149 I 0.720
runx3 Takifugu rubripes ENSTRUG00000001517 I 0.720
ENSXMAG00000018835 Xiphophorus maculatus ENSXMAG00000018835 I 0.720
SBAD_0000678401 Soboliphyme baturini SBAD_0000678401 N 0.720
ENSAMXG00000004048 Astyanax mexicanus ENSAMXG00000004048 I 0.720
GE17890 Drosophila yakuba FBgn0235328 I 0.720
ENSPFOG00000003997 Poecilia formosa ENSPFOG00000003997 I 0.720
GF15967 Drosophila ananassae FBgn0092990 I 0.720
GM23044 Drosophila sechellia FBgn0177912 I 0.720
ENSOARG00000006421 Ovis aries ENSOARG00000006421 I 0.720
GG19691 Drosophila erecta FBgn0111893 I 0.720
ENSP00000409227-D1 Bos grunniens ENSP00000409227-D1 I 0.720
GI15484 Drosophila mojavensis FBgn0138233 I 0.720
ENSMEUG00000014419 Macropus eugenii ENSMEUG00000014419 I 0.720
GH17737 Drosophila grimshawi FBgn0125207 I 0.720
LCUP002652 Lucilia cuprina LCUP002652 I 0.720
GA13742 Drosophila pseudoobscura FBgn0073778 I 0.720
GL15800 Drosophila persimilis FBgn0153404 I 0.720
XP_002939387 Xenopus tropicalis XP_002939387 I 0.720
XP_002939388 Xenopus tropicalis XP_002939388 I 0.720
XP_002939386 Xenopus tropicalis XP_002939386 I 0.720
runx3 Oryzias latipes ENSORLG00000017515 I 0.720
ENSONIG00000008210 Oreochromis niloticus ENSONIG00000008210 I 0.720
TC006542 Tribolium castaneum TC006542 I 0.720
runx3 Gasterosteus aculeatus ENSGACG00000007301 I 0.720
runx3 Danio rerio ENSDARG00000052826 I 0.720
Pvit_04762 Pogona vitticeps Pvit_04762 I 0.710
Gfo_R015914 Geospiza fortis Gfo_R015914 I 0.710
Ogr17914 Ophisaurus gracilis Ogr17914 I 0.710
ENSP00000300305 Macaca fascicularis ENSP00000300305 I 0.710
Cmyd_10021516 Chelonia mydas Cmyd_10021516 I 0.710
tetur01g02340 Tetranychus urticae tetur01g02340 I 0.710
ISCW023333 Ixodes scapularis ISCW023333 I 0.710
runx2b Tetraodon nigroviridis ENSTNIG00000009685 I 0.710
ENSMPUG00000001340 Mustela putorius furo ENSMPUG00000001340 I 0.710
Runx1 Mus musculus ENSMUSG00000022952 D 0.710
RUNX1 Macaca mulatta ENSMMUG00000001649 I 0.710
RUNX1 Microcebus murinus ENSMICG00000011998 I 0.710
ENSCSAG00000008703 Chlorocebus sabaeus ENSCSAG00000008703 I 0.710
ENSNLEG00000004310 Nomascus leucogenys ENSNLEG00000004310 I 0.710
RUNX1 Oryctolagus cuniculus ENSOCUG00000013731 I 0.710
RUNX1 Canis familiaris ENSCAFG00000009596 I 0.710
ENSONIG00000001025 Oreochromis niloticus ENSONIG00000001025 I 0.710
RUNX1 Otolemur garnettii ENSOGAG00000033362 I 0.710
RUNX1 Equus caballus ENSECAG00000003462 I 0.710
ENSXMAG00000003400 Xiphophorus maculatus ENSXMAG00000003400 I 0.710
RUNX1 Loxodonta africana ENSLAFG00000004290 I 0.710
RUNX1 Homo sapiens ENSG00000159216 D 0.710
RUNX1 Dasypus novemcinctus ENSDNOG00000015041 I 0.710
ENSFALG00000000025 Ficedula albicollis ENSFALG00000000025 I 0.710
Runx1 Dipodomys ordii ENSDORG00000004347 I 0.710
runx2b Gasterosteus aculeatus ENSGACG00000012322 I 0.710
RUNX1 Gallus gallus ENSGALG00000016022 I 0.710
ENSLACG00000015930 Latimeria chalumnae ENSLACG00000015930 I 0.710
runx2a Danio rerio ENSDARG00000040261 I 0.710
ENSGMOG00000010468 Gadus morhua ENSGMOG00000010468 I 0.710
RUNX1 Gorilla gorilla ENSGGOG00000012862 I 0.710
runx2 Oryzias latipes ENSORLG00000010169 I 0.710
RUNX1 Callithrix jacchus ENSCJAG00000002816 I 0.710
ENSSSCG00000012051 Sus scrofa ENSSSCG00000012051 I 0.710
CPIJ006372 Culex quinquefasciatus CPIJ006372 I 0.710
DAPPUDRAFT_290554 Daphnia pulex DAPPUDRAFT_290554 I 0.710
Runx1 Rattus norvegicus ENSRNOG00000001704 I 0.710
CapteG142159 Capitella teleta CapteG142159 I 0.710
runx2 Takifugu rubripes ENSTRUG00000003501 I 0.710
RUNX1 Tursiops truncatus ENSTTRG00000014160 I 0.710
CpipJ_CPIJ006372 Culex pipiens CpipJ_CPIJ006372 I 0.710
ENSTSYG00000005097 Tarsius syrichta ENSTSYG00000005097 I 0.710
AAEL006167 Aedes aegypti AAEL006167 I 0.710
RUNX1 Pan troglodytes ENSPTRG00000013883 I 0.710
ENSAMEG00000005325 Ailuropoda melanoleuca ENSAMEG00000005325 I 0.710
RUNX1 Procavia capensis ENSPCAG00000016747 I 0.710
ENSAMXG00000000881 Astyanax mexicanus ENSAMXG00000000881 I 0.710
ENSPFOG00000016115 Poecilia formosa ENSPFOG00000016115 I 0.710
ENSPPYG00000011394 Pongo abelii ENSPPYG00000011394 I 0.710
ENSPANG00000007357 Papio anubis ENSPANG00000007357 I 0.710
ENSPSIG00000017547 Pelodiscus sinensis ENSPSIG00000017547 I 0.710
AMAM016300 Anopheles maculatus AMAM016300 I 0.700
ACHR006341 Anopheles christyi ACHR006341 I 0.700
AAEL007040 Aedes aegypti AAEL007040 I 0.700
AFUN010423 Anopheles funestus AFUN010423 I 0.700
AMIN005759 Anopheles minimus AMIN005759 I 0.700
RUNX2 Dasypus novemcinctus ENSDNOG00000034361 I 0.700
AFAF000166 Anopheles farauti AFAF000166 I 0.700
RUNX2 Bos taurus ENSBTAG00000004104 I 0.700
ADIR005600 Anopheles dirus ADIR005600 I 0.700
AEPI010884 Anopheles epiroticus AEPI010884 I 0.700
RUNX2 Anolis carolinensis ENSACAG00000013003 I 0.700
ACUA016618 Anopheles culicifacies ACUA016618 I 0.700
RUNX2 Cavia porcellus ENSCPOG00000005277 I 0.700
ENSCSAG00000012528 Chlorocebus sabaeus ENSCSAG00000012528 I 0.700
ASTEI07770 Anopheles stephensi ASTEI07770 I 0.700
ENSCPOG00000002684 Cavia porcellus ENSCPOG00000002684 I 0.700
ENSLOCG00000002744 Lepisosteus oculatus ENSLOCG00000002744 I 0.700
RUNX2 Pan troglodytes ENSPTRG00000018228 I 0.700
RUNX1 Pteropus vampyrus ENSPVAG00000001606 I 0.700
ENSPPYG00000016664 Pongo abelii ENSPPYG00000016664 I 0.700
SPU_006917 Strongylocentrotus purpuratus SPU_006917 I 0.700
RUNX2 Ochotona princeps ENSOPRG00000002943 I 0.700
ENSPANG00000006186 Papio anubis ENSPANG00000006186 I 0.700
Runx2 Rattus norvegicus ENSRNOG00000020193 I 0.700
ENSSHAG00000009950 Sarcophilus harrisii ENSSHAG00000009950 I 0.700
runx1 Takifugu rubripes ENSTRUG00000012611 I 0.700
RUNX2 Tursiops truncatus ENSTTRG00000006943 I 0.700
RUNX2 Taeniopygia guttata ENSTGUG00000013249 I 0.700
ENSSTOG00000010163 Ictidomys tridecemlineatus ENSSTOG00000010163 I 0.700
ENSSHAG00000014782 Sarcophilus harrisii ENSSHAG00000014782 I 0.700
ENSOPRG00000000765 Ochotona princeps ENSOPRG00000000765 I 0.700
RUNX2 Otolemur garnettii ENSOGAG00000003900 I 0.700
Ocbimv22002042m.g Octopus bimaculoides Ocbimv22002042m.g I 0.700
Pvit_01165 Pogona vitticeps Pvit_01165 I 0.700
ENSLACG00000011545 Latimeria chalumnae ENSLACG00000011545 I 0.700
RUNX2 Gorilla gorilla ENSGGOG00000012890 I 0.700
runx1.L Xenopus laevis XB-GENE-864949 I 0.700
RUNX2 Homo sapiens ENSG00000124813 D 0.700
ENSLOCG00000015816 Lepisosteus oculatus ENSLOCG00000015816 I 0.700
RUNX2 Macaca mulatta ENSMMUG00000019819 I 0.700
Runx2 Mus musculus ENSMUSG00000039153 D 0.700
Alligator_sinensis_CCG001676.1 Alligator sinensis Alligator_sinensis_CCG001676.1 I 0.700
Cmyd_10020455 Chelonia mydas Cmyd_10020455 I 0.700
RUNX1 Monodelphis domestica ENSMODG00000021051 I 0.700
RUNX2 Monodelphis domestica ENSMODG00000018912 I 0.700
RUNX2 Erinaceus europaeus ENSEEUG00000009243 I 0.700