AFUN005474 (Anopheles funestus)
Runt

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00853 (Runt) IPR013524 AFUN005474 T319749_2.00 Vectorbase (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
lz
M03964_2.00
Drosophila melanogaster
HRACCGCAAHM

KDTTGCGGTYD
SELEX
Nitta et al.(2015)
lz_1
0.761 0.761
lz
M03965_2.00
Drosophila melanogaster
HVACCRCARWAACCRCAV

BTGYGGTTWYTGYGGTBD
SELEX
Nitta et al.(2015)
lz_2
0.761 0.761
lz
M03966_2.00
Drosophila melanogaster
WRACCRCAWTAACCRCAA

TTGYGGTTAWTGYGGTYW
SELEX
Nitta et al.(2015)
lz_3
0.761 0.761
lz
M03967_2.00
Drosophila melanogaster
HRACCGCAAAACCRCAR

YTGYGGTTTTGCGGTYD
SELEX
Nitta et al.(2015)
lz_4
0.761 0.761
Runx1
M08163_2.00
Mus musculus
HRRCCACARVN

NBYTGTGGYYD
ChIP-seq
Mathelier et al.(2014)
MA0002.2
0.739 0.739
RUNX1
M09371_2.00
Homo sapiens
NWAACCACARV

BYTGTGGTTWN
Misc
Kulakovskiy et al.(2013)
RUNX1_HUMAN.H11MO.0.A
0.739 0.739
Runx1
M09372_2.00
Mus musculus
VWRACCACARVV

BBYTGTGGTYWB
Misc
Kulakovskiy et al.(2013)
RUNX1_MOUSE.H11MO.0.A
0.739 0.739
RUNX1
M09632_2.00
Homo sapiens
HAACCACADV

BHTGTGGTTD
Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE29180
0.739 0.739
RUNX1
M09631_2.00
Homo sapiens
VCCACWTCCTBY

RVAGGAWGTGGB
Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE17954
0.739 0.739
Runx1
M09633_2.00
Mus musculus
NWAACCACAR

YTGTGGTTWN
Misc
Heinz et al.(2010)
HPC7-Runx1_GSE22178
0.739 0.739
RUNX1
M11258_2.00
Homo sapiens
ACCRCA

TGYGGT
Transfac
Matys et al.(2006)
V$AML1_01
0.739 0.739
RUNX1
M11259_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q4_01
0.739 0.739
RUNX1
M11260_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q4_02
0.739 0.739
RUNX1
M11261_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q4
0.739 0.739
RUNX1
M11262_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q5
0.739 0.739
RUNX1
M11263_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q6
0.739 0.739
run
M06444_2.00
Drosophila melanogaster
WAACCGCAR

YTGCGGTTW
B1H
Zhu et al.(2011)
run_Bgb_NBT_FBgn0003300
0.728 0.728
Runx2
M01307_2.00
Mus musculus
NHDACCRCAN

NTGYGGTHDN
PBM
Lambert et al.(2019)
pTH9764
0.717 0.717
RUNX2
M03468_2.00
Homo sapiens
HRACCGCAAACCRCRD

HYGYGGTTTGCGGTYD
SELEX
Jolma et al.(2013)
RUNX2_1
0.717 0.717
RUNX2
M03469_2.00
Homo sapiens
HRACCRCADWWACCRCAD

HTGYGGTWWHTGYGGTYD
SELEX
Jolma et al.(2013)
RUNX2_2
0.717 0.717
RUNX2
M03470_2.00
Homo sapiens
WAACCRCAR

YTGYGGTTW
SELEX
Jolma et al.(2013)
RUNX2_3
0.717 0.717
RUNX3
M03464_2.00
Homo sapiens
HRACCGCAAACCRCAN

NTGYGGTTTGCGGTYD
SELEX
Jolma et al.(2013)
RUNX3_1
0.717 0.717
RUNX3
M03465_2.00
Homo sapiens
WAACCRCARN

NYTGYGGTTW
SELEX
Jolma et al.(2013)
RUNX3_2
0.717 0.717
RUNX3
M03466_2.00
Homo sapiens
HDACCRCADWAACCRCRN

NYGYGGTTWHTGYGGTHD
SELEX
Jolma et al.(2013)
RUNX3_3
0.717 0.717
RUNX3
M03467_2.00
Homo sapiens
HRACCRCAAH

DTTGYGGTYD
SELEX
Jolma et al.(2013)
RUNX3_4
0.717 0.717
RUNX3
M02751_2.00
Homo sapiens
WACCRCAM

KTGYGGTW
SELEX
Jolma et al.(2010)
RUNX3_monomer
0.717 0.717
RUNX2
M05733_2.00
Homo sapiens
NHRACCRCADWAACCRCAVN

NBTGYGGTTWHTGYGGTYDN
SELEX
Yin et al.(2017)
RUNX2_eDBD_HT-SELEX
0.717 0.717
RUNX3
M05731_2.00
Homo sapiens
YWAACCGCAAAAACCGCARV

BYTGCGGTTTTTGCGGTTWR
SELEX
Yin et al.(2017)
RUNX3_FL_HT-SELEX
0.717 0.717
RUNX2
M09370_2.00
Homo sapiens
MMHAACCACAVVMH

DKBBTGTGGTTDKK
Misc
Kulakovskiy et al.(2013)
RUNX2_HUMAN.H11MO.0.A
0.717 0.717
RUNX3
M09369_2.00
Homo sapiens
HAACCACARN

NYTGTGGTTD
Misc
Kulakovskiy et al.(2013)
RUNX3_HUMAN.H11MO.0.A
0.717 0.717
Runx2
M09373_2.00
Mus musculus
VWRACCACARVV

BBYTGTGGTYWB
Misc
Kulakovskiy et al.(2013)
RUNX2_MOUSE.H11MO.0.A
0.717 0.717
Runx3
M09374_2.00
Mus musculus
NHRACCACARVN

NBYTGTGGTYDN
Misc
Kulakovskiy et al.(2013)
RUNX3_MOUSE.H11MO.0.A
0.717 0.717
RUNX2
M09630_2.00
Homo sapiens
NHVACCACANNN

NNNTGTGGTBDN
Misc
Heinz et al.(2010)
PCa-RUNX2_GSE33889
0.717 0.717
RUNX3
M11252_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML2_Q3_01
0.717 0.717
RUNX3
M11253_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML2_Q3
0.717 0.717
RUNX3
M11254_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML2_Q4
0.717 0.717
RUNX2
M11255_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML3_Q3
0.717 0.717
RUNX2
M11256_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML3_Q6
0.717 0.717
RUNX2
M11257_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$OSF2_Q6
0.717 0.717
RUNX2
M05734_2.00
Homo sapiens
NWAACCACRAAAACCACRRN

NYYGTGGTTTTYGTGGTTWN
SELEX
Yin et al.(2017)
RUNX2_eDBD_Methyl-HT-SELEX
0.717 0.717
RUNX3
M05732_2.00
Homo sapiens
HWAACCACRAAAACCACRARN

NYTYGTGGTTTTYGTGGTTWD
SELEX
Yin et al.(2017)
RUNX3_FL_Methyl-HT-SELEX
0.717 0.717
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AFUN005474-PA Runt 61 152

Links

Other Runt family TFs
Other Anopheles funestus TFs

162 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
RUNX2 Homo sapiens ENSG00000124813 D 0.717
Runx1 Mus musculus ENSMUSG00000022952 D 0.739
Runx2 Mus musculus ENSMUSG00000039153 D 0.717
run Drosophila melanogaster FBgn0003300 D 0.728
lz Drosophila melanogaster FBgn0002576 D 0.761
TC006536 Tribolium castaneum TC006536 I 0.750
SMAR009403 Strigamia maritima SMAR009403 I 0.761
SINV13345 Solenopsis invicta SINV13345 I 0.707
SINV13317 Solenopsis invicta SINV13317 I 0.793
RPRC005391 Rhodnius prolixus RPRC005391 I 0.815
TC006542 Tribolium castaneum TC006542 I 0.739
tetur01g02340 Tetranychus urticae tetur01g02340 I 0.761
Ocbimv22002042m.g Octopus bimaculoides Ocbimv22002042m.g I 0.717
Cflo_03909--XP_394016.2_APIME Camponotus floridanus Cflo_03909--XP_394016.2_APIME I 0.793
Cmyd_10020455 Chelonia mydas Cmyd_10020455 I 0.717
ENSP00000300305 Macaca fascicularis ENSP00000300305 I 0.717
Gfo_R015914 Geospiza fortis Gfo_R015914 I 0.723
Hsal_04635--XP_394013.3_APIME Harpegnathos saltator Hsal_04635--XP_394013.3_APIME I 0.707
Hsal_12319--XP_394016.2_APIME Harpegnathos saltator Hsal_12319--XP_394016.2_APIME I 0.793
Pvit_01165 Pogona vitticeps Pvit_01165 I 0.717
RPRC000026 Rhodnius prolixus RPRC000026 I 0.713
PHUM333310 Pediculus humanus PHUM333310 I 0.793
MESCA007079 Megaselia scalaris MESCA007079 I 0.844
GL15800 Drosophila persimilis FBgn0153404 I 0.750
GL15806 Drosophila persimilis FBgn0153410 I 0.728
GL16499 Drosophila persimilis FBgn0154103 I 0.783
GM22478 Drosophila sechellia FBgn0177348 I 0.761
GM23044 Drosophila sechellia FBgn0177912 I 0.750
GM23050 Drosophila sechellia FBgn0177918 I 0.728
GD17495 Drosophila simulans FBgn0189047 I 0.750
GJ19245 Drosophila virilis FBgn0206390 I 0.750
GK19810 Drosophila willistoni FBgn0221808 I 0.750
GK19815 Drosophila willistoni FBgn0221813 I 0.728
GE17788 Drosophila yakuba FBgn0235232 I 0.761
GE17890 Drosophila yakuba FBgn0235328 I 0.750
GA22609 Drosophila pseudoobscura FBgn0244012 I 0.783
RunxB Drosophila melanogaster FBgn0259162 I 0.750
HMEL009843 Heliconius melpomene HMEL009843 I 0.716
KGM_21067 Danaus plexippus KGM_21067 I 0.728
MCINX000302 Melitaea cinxia MCINX000302 I 0.717
GI15491 Drosophila mojavensis FBgn0138240 I 0.728
Sakowv30005496m.g Saccoglossus kowalevskii Sakowv30005496m.g I 0.772
AMEM004753 Anopheles merus AMEM004753 I 0.761
AMEC007551 Anopheles melas AMEC007551 I 0.761
AFUN010424 Anopheles funestus AFUN010424 I 0.761
AFAF002111 Anopheles farauti AFAF002111 I 0.714
AEPI011470 Anopheles epiroticus AEPI011470 I 0.761
AEPI003479 Anopheles epiroticus AEPI003479 I 0.708
ADIR002675 Anopheles dirus ADIR002675 I 0.859
ADIR001029 Anopheles dirus ADIR001029 I 0.761
AMEM017856 Anopheles merus AMEM017856 I 0.708
AMIN002518 Anopheles minimus AMIN002518 I 0.708
PPAI010985 Phlebotomus papatasi PPAI010985 I 0.739
PPAI005889 Phlebotomus papatasi PPAI005889 I 0.750
LLOJ002717 Lutzomyia longipalpis LLOJ002717 I 0.761
ASTEI07959 Anopheles stephensi ASTEI07959 I 0.708
ASTEI07771 Anopheles stephensi ASTEI07771 I 0.761
ASIS002518 Anopheles sinensis ASIS002518 I 0.745
AQUA009970 Anopheles quadriannulatus AQUA009970 I 0.761
AQUA008686 Anopheles quadriannulatus AQUA008686 I 0.737
ACUA000036 Anopheles culicifacies ACUA000036 I 1.000
ACOM031089 Anopheles coluzzii ACOM031089 I 0.761
runx1.L Xenopus laevis XB-GENE-864949 I 0.717
LDEC020505 Leptinotarsa decemlineata LDEC020505 I 0.750
LDEC003023 Leptinotarsa decemlineata LDEC003023 I 0.772
LCUP002657 Lucilia cuprina LCUP002657 I 0.719
LCUP002652 Lucilia cuprina LCUP002652 I 0.734
LCUP002648 Lucilia cuprina LCUP002648 I 0.722
CLEC011127 Cimex lectularius CLEC011127 I 0.728
CLEC011123 Cimex lectularius CLEC011123 I 0.739
XP_002939386 Xenopus tropicalis XP_002939386 I 0.739
XP_002939387 Xenopus tropicalis XP_002939387 I 0.739
ACHR007816 Anopheles christyi ACHR007816 I 0.761
ACHR004078 Anopheles christyi ACHR004078 I 0.708
AATE002063 Anopheles atroparvus AATE002063 I 0.761
AARA011472 Anopheles arabiensis AARA011472 I 0.761
AARA011332 Anopheles arabiensis AARA011332 I 0.722
AARA004356 Anopheles arabiensis AARA004356 I 0.708
AALB009220 Anopheles albimanus AALB009220 I 0.700
AALB007753 Anopheles albimanus AALB007753 I 0.745
PPAI010986 Phlebotomus papatasi PPAI010986 I 0.761
CpipJ_CPIJ006369 Culex pipiens CpipJ_CPIJ006369 I 0.728
RUNX3 Callithrix jacchus ENSCJAG00000020815 I 0.717
RUNX2 Cavia porcellus ENSCPOG00000005277 I 0.717
ENSCSAG00000012528 Chlorocebus sabaeus ENSCSAG00000012528 I 0.717
runx2a Danio rerio ENSDARG00000040261 I 0.728
runx2b Danio rerio ENSDARG00000059233 I 0.707
runx1 Danio rerio ENSDARG00000087646 I 0.702
RUNX1 Dasypus novemcinctus ENSDNOG00000015041 I 0.739
RUNX2 Dasypus novemcinctus ENSDNOG00000034361 I 0.717
RUNX1 Equus caballus ENSECAG00000003462 I 0.739
RUNX2 Erinaceus europaeus ENSEEUG00000009243 I 0.717
runx2b Gasterosteus aculeatus ENSGACG00000012322 I 0.717
RUNX2 Gorilla gorilla ENSGGOG00000012890 I 0.717
ENSLACG00000011545 Latimeria chalumnae ENSLACG00000011545 I 0.717
ENSLACG00000013776 Latimeria chalumnae ENSLACG00000013776 I 0.717
ENSLACG00000015930 Latimeria chalumnae ENSLACG00000015930 I 0.739
ENSLOCG00000002744 Lepisosteus oculatus ENSLOCG00000002744 I 0.750
ENSLOCG00000015816 Lepisosteus oculatus ENSLOCG00000015816 I 0.717
RUNX2 Bos taurus ENSBTAG00000004104 I 0.717
ENSAMXG00000017349 Astyanax mexicanus ENSAMXG00000017349 I 0.707
CpipJ_CPIJ006372 Culex pipiens CpipJ_CPIJ006372 I 0.856
CpipJ_CPIJ016826 Culex pipiens CpipJ_CPIJ016826 I 0.737
AAEL006160 Aedes aegypti AAEL006160 I 0.761
AAEL007036 Aedes aegypti AAEL007036 I 0.739
ACEP16391 Atta cephalotes ACEP16391 I 0.707
ACEP16409 Atta cephalotes ACEP16409 I 0.793
ACYPI001442 Acyrthosiphon pisum ACYPI001442 I 0.739
ACYPI007541 Acyrthosiphon pisum ACYPI007541 I 0.750
AGAP001094 Anopheles gambiae AGAP001094 I 0.761
AGAP002506 Anopheles gambiae AGAP002506 I 0.708
BGIBMGA008906 Bombyx mori BGIBMGA008906 I 0.750
CPIJ006369 Culex quinquefasciatus CPIJ006369 I 0.728
CPIJ006372 Culex quinquefasciatus CPIJ006372 I 0.856
CPIJ016826 Culex quinquefasciatus CPIJ016826 I 0.737
RUNX2 Anolis carolinensis ENSACAG00000013003 I 0.717
ENSAMXG00000000881 Astyanax mexicanus ENSAMXG00000000881 I 0.728
ENSAMXG00000012244 Astyanax mexicanus ENSAMXG00000012244 I 0.717
RUNX2 Macaca mulatta ENSMMUG00000019819 I 0.717
GI15484 Drosophila mojavensis FBgn0138233 I 0.711
run Drosophila simulans FBgn0016352 I 0.728
run Drosophila virilis FBgn0013920 I 0.728
run Drosophila pseudoobscura FBgn0013862 I 0.728
RUNX1 Tursiops truncatus ENSTTRG00000014160 I 0.739
RUNX2 Tursiops truncatus ENSTTRG00000006943 I 0.717
ENSTSYG00000005097 Tarsius syrichta ENSTSYG00000005097 I 0.739
runx1 Takifugu rubripes ENSTRUG00000012611 I 0.717
runx2 Takifugu rubripes ENSTRUG00000003501 I 0.707
GA13742 Drosophila pseudoobscura FBgn0073778 I 0.750
run Drosophila yakuba FBgn0084618 I 0.728
GH17740 Drosophila grimshawi FBgn0125210 I 0.728
GH17737 Drosophila grimshawi FBgn0125207 I 0.750
GH11831 Drosophila grimshawi FBgn0119310 I 0.714
GG19691 Drosophila erecta FBgn0111893 I 0.750
GG18309 Drosophila erecta FBgn0110525 I 0.761
GF15970 Drosophila ananassae FBgn0092993 I 0.728
GF15967 Drosophila ananassae FBgn0092990 I 0.750
run Drosophila erecta FBgn0085118 I 0.728
ENSTNIG00000018690 Tetraodon nigroviridis ENSTNIG00000018690 I 0.707
RUNX2 Monodelphis domestica ENSMODG00000018912 I 0.717
RUNX2 Pan troglodytes ENSPTRG00000018228 I 0.717
ENSPPYG00000016664 Pongo abelii ENSPPYG00000016664 I 0.717
ENSPPYG00000001714 Pongo abelii ENSPPYG00000001714 I 0.717
ENSPANG00000006186 Papio anubis ENSPANG00000006186 I 0.717
RUNX2 Ochotona princeps ENSOPRG00000002943 I 0.717
ENSOPRG00000000765 Ochotona princeps ENSOPRG00000000765 I 0.728
RUNX2 Otolemur garnettii ENSOGAG00000003900 I 0.717
ENSMPUG00000001340 Mustela putorius furo ENSMPUG00000001340 I 0.739
RUNX1 Monodelphis domestica ENSMODG00000021051 I 0.728
RUNX1 Pteropus vampyrus ENSPVAG00000001606 I 0.728
RUNX2 Pteropus vampyrus ENSPVAG00000001720 I 0.717
runx3 Tetraodon nigroviridis ENSTNIG00000016911 I 0.717
Runx2 Rattus norvegicus ENSRNOG00000020193 I 0.717
RUNX2 Taeniopygia guttata ENSTGUG00000013249 I 0.717
ENSSHAG00000009950 Sarcophilus harrisii ENSSHAG00000009950 I 0.717
ENSSHAG00000014782 Sarcophilus harrisii ENSSHAG00000014782 I 0.728
ENSSTOG00000010163 Ictidomys tridecemlineatus ENSSTOG00000010163 I 0.717
AATE018583 Anopheles atroparvus AATE018583 N 0.758
AFAF001885 Anopheles farauti AFAF001885 N 0.859
AQUA009447 Anopheles quadriannulatus AQUA009447 N 0.893
AMEC020337 Anopheles melas AMEC020337 N 0.793
ACOM036889 Anopheles coluzzii ACOM036889 N 0.902