AMEM004753 (Anopheles merus)
Runt

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00853 (Runt) IPR013524 AMEM004753 T319757_2.00 Vectorbase (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
run
M06444_2.00
Drosophila melanogaster
WAACCGCAR

YTGCGGTTW
B1H
Zhu et al.(2011)
run_Bgb_NBT_FBgn0003300
0.831 0.831
lz
M03964_2.00
Drosophila melanogaster
HRACCGCAAHM

KDTTGCGGTYD
SELEX
Nitta et al.(2015)
lz_1
0.708 0.708
lz
M03965_2.00
Drosophila melanogaster
HVACCRCARWAACCRCAV

BTGYGGTTWYTGYGGTBD
SELEX
Nitta et al.(2015)
lz_2
0.708 0.708
lz
M03966_2.00
Drosophila melanogaster
WRACCRCAWTAACCRCAA

TTGYGGTTAWTGYGGTYW
SELEX
Nitta et al.(2015)
lz_3
0.708 0.708
lz
M03967_2.00
Drosophila melanogaster
HRACCGCAAAACCRCAR

YTGYGGTTTTGCGGTYD
SELEX
Nitta et al.(2015)
lz_4
0.708 0.708
Runx1
M08163_2.00
Mus musculus
HRRCCACARVN

NBYTGTGGYYD
ChIP-seq
Mathelier et al.(2014)
MA0002.2
0.700 0.700
RUNX1
M09371_2.00
Homo sapiens
NWAACCACARV

BYTGTGGTTWN
Misc
Kulakovskiy et al.(2013)
RUNX1_HUMAN.H11MO.0.A
0.700 0.700
Runx1
M09372_2.00
Mus musculus
VWRACCACARVV

BBYTGTGGTYWB
Misc
Kulakovskiy et al.(2013)
RUNX1_MOUSE.H11MO.0.A
0.700 0.700
RUNX1
M09632_2.00
Homo sapiens
HAACCACADV

BHTGTGGTTD
Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE29180
0.700 0.700
RUNX1
M09631_2.00
Homo sapiens
VCCACWTCCTBY

RVAGGAWGTGGB
Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE17954
0.700 0.700
Runx1
M09633_2.00
Mus musculus
NWAACCACAR

YTGTGGTTWN
Misc
Heinz et al.(2010)
HPC7-Runx1_GSE22178
0.700 0.700
RUNX1
M11258_2.00
Homo sapiens
ACCRCA

TGYGGT
Transfac
Matys et al.(2006)
V$AML1_01
0.700 0.700
RUNX1
M11259_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q4_01
0.700 0.700
RUNX1
M11260_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q4_02
0.700 0.700
RUNX1
M11261_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q4
0.700 0.700
RUNX1
M11262_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q5
0.700 0.700
RUNX1
M11263_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q6
0.700 0.700
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AMEM004753-PA Runt 27 156

Links

Other Runt family TFs
Other Anopheles merus TFs

239 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
CaO19.1227 Candida albicans CaO19.1227 I 0.000
AB00587.1 Alternaria brassicicola AB00587.1 I 0.000
gw1.10.415.1 Mycosphaerella fijiensis gw1.10.415.1 I 0.000
estExt_fgenesh1_pg.C_20387 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_20387 I 0.000
Z517_01830 Fonsecaea pedrosoi Z517_01830 I 0.000
TSTA_064390 Talaromyces stipitatus TSTA_064390 I 0.000
PV07_00139 Cladophialophora immunda PV07_00139 I 0.000
PTT_17743 Pyrenophora teres PTT_17743 I 0.000
PTRG_08944 Pyrenophora triticirepentis PTRG_08944 I 0.000
PMAA_033170 Talaromyces marneffei PMAA_033170 I 0.000
MYCFIDRAFT_107799 Pseudocercospora fijiensis MYCFIDRAFT_107799 I 0.000
CaO19.8813 Candida albicans CaO19.8813 I 0.000
COCC4DRAFT_156489 Bipolaris maydis COCC4DRAFT_156489 I 0.000
COCCADRAFT_9692 Bipolaris zeicola COCCADRAFT_9692 I 0.000
COCMIDRAFT_81410 Bipolaris oryzae COCMIDRAFT_81410 I 0.000
COCSADRAFT_166493 Bipolaris sorokiniana COCSADRAFT_166493 I 0.000
COCVIDRAFT_12975 Bipolaris victoriae COCVIDRAFT_12975 I 0.000
LEMA_P036570.1 Leptosphaeria maculans LEMA_P036570.1 I 0.000
PMAA_033170 Penicillium marneffei PMAA_033170 I 0.000
SNOG_08674 Phaeosphaeria nodorum SNOG_08674 N 0.000