CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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A_07565
(
Schistosoma haematobium
)
Runt
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00853 (Runt)
IPR013524
A_07565
T319786_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Smp_174320
M02457_2.00
Schistosoma mansoni
NNAACCGCARN
NYTGCGGTTNN
PBM
Weirauch et al.(2014)
pTH8368
0.985
0.985
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
A_07565
Runt
11
140
LKRALREHTTDLAPTSNPHLLCTPLPKHWRSNKSLPSQFRVVSLIPVPDGTRVTVTAGNEERPCAELKNPVTIMHGHEARFSDLRFLGRSGRGKSFNITITIETTPPIVALYARAIKVTVDGPRVPRSKY
Links
Other
Runt
family TFs
Other
Schistosoma haematobium
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SMTD_0000935101
Schistosoma mattheei
SMTD_0000935101
I
1.000
A_06411
Schistosoma haematobium
A_06411
I
1.000
Smp_174320
Schistosoma mansoni
Smp_174320
D
0.992
SROB_0000638901
Schistosoma rodhaini
SROB_0000638901
I
0.989
Sjc_0130210
Schistosoma japonicum
Sjc_0130210
I
0.979
csin105545
Clonorchis sinensis
csin105545
I
0.885
D915_03512
Fasciola hepatica
D915_03512
I
0.798
SSLN_0000508301
Schistocephalus solidus
SSLN_0000508301
I
0.762
DILT_0000572101
Diphyllobothrium latum
DILT_0000572101
I
0.762
TTAC_0000783001
Hydatigera taeniaeformis
TTAC_0000783001
I
0.754
EmuJ_000490800
Echinococcus multilocularis
EmuJ_000490800
I
0.746
HmN_000789900
Hymenolepis microstoma
HmN_000789900
I
0.746
HNAJ_0001011401
Hymenolepis nana
HNAJ_0001011401
I
0.738
TsM_000741200
Taenia solium
TsM_000741200
I
0.726
HDID_0000068701
Hymenolepis diminuta
HDID_0000068701
I
0.723
TRE_0000705801
Trichobilharzia regenti
TRE_0000705801
I
0.715
HmN_000790000
Hymenolepis microstoma
HmN_000790000
I
0.715
HNAJ_0000973501
Hymenolepis nana
HNAJ_0000973501
I
0.715
SPER_0000558501
Spirometra erinaceieuropaei
SPER_0000558501
I
0.706