HmN_000789900 (Hymenolepis microstoma)
Runt

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00853 (Runt) IPR013524 HmN_000789900 T319813_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Smp_174320
M02457_2.00
Schistosoma mansoni
NNAACCGCARN

NYTGCGGTTNN
PBM
Weirauch et al.(2014)
pTH8368
0.738 0.738
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HmN_000789900 Runt 12 141

Links

Other Runt family TFs
Other Hymenolepis microstoma TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
HNAJ_0001011401 Hymenolepis nana HNAJ_0001011401 I 0.977
EmuJ_000490800 Echinococcus multilocularis EmuJ_000490800 I 0.915
MCOS_0000437401 Mesocestoides corti MCOS_0000437401 I 0.915
TTAC_0000783001 Hydatigera taeniaeformis TTAC_0000783001 I 0.908
HNAJ_0000973501 Hymenolepis nana HNAJ_0000973501 I 0.892
HmN_000790000 Hymenolepis microstoma HmN_000790000 I 0.892
TsM_000741200 Taenia solium TsM_000741200 I 0.884
DILT_0000572101 Diphyllobothrium latum DILT_0000572101 I 0.877
SSLN_0000508301 Schistocephalus solidus SSLN_0000508301 I 0.877
HDID_0000068701 Hymenolepis diminuta HDID_0000068701 I 0.877
SPER_0000558501 Spirometra erinaceieuropaei SPER_0000558501 I 0.824
Sjc_0130210 Schistosoma japonicum Sjc_0130210 I 0.766
A_06411 Schistosoma haematobium A_06411 I 0.746
A_07565 Schistosoma haematobium A_07565 I 0.746
SMTD_0000935101 Schistosoma mattheei SMTD_0000935101 I 0.745
SROB_0000638901 Schistosoma rodhaini SROB_0000638901 I 0.745
Smp_174320 Schistosoma mansoni Smp_174320 D 0.744
csin105545 Clonorchis sinensis csin105545 I 0.731
TRE_0000705801 Trichobilharzia regenti TRE_0000705801 I 0.726
ENSSSCG00000025551 Sus scrofa ENSSSCG00000025551 I 0.719
T265_03056 Opisthorchis viverrini T265_03056 I 0.713
ENSSTOG00000020082 Ictidomys tridecemlineatus ENSSTOG00000020082 I 0.702