CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HNAJ_0001011401
(
Hymenolepis nana
)
Runt
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00853 (Runt)
IPR013524
HNAJ_0001011401
T319816_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Smp_174320
M02457_2.00
Schistosoma mansoni
NNAACCGCARN
NYTGCGGTTNN
PBM
Weirauch et al.(2014)
pTH8368
0.731
0.731
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HNAJ_0001011401-mRNA-1
Runt
12
141
LRRALHDHPGDLVVTGSPHLLCSRLPKHWRSNKSLPTPFRVVSLAPVLDGTRVSVSAGNEERPFAELKNAVAIMQNQEARFNDLRFLGRSGRGKSFNVTITVESSPPLVGVYSHAIKVTVDGPRVPRTKY
Links
Other
Runt
family TFs
Other
Hymenolepis nana
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HmN_000789900
Hymenolepis microstoma
HmN_000789900
I
0.977
EmuJ_000490800
Echinococcus multilocularis
EmuJ_000490800
I
0.900
TTAC_0000783001
Hydatigera taeniaeformis
TTAC_0000783001
I
0.900
DILT_0000572101
Diphyllobothrium latum
DILT_0000572101
I
0.885
SSLN_0000508301
Schistocephalus solidus
SSLN_0000508301
I
0.885
HNAJ_0000973501
Hymenolepis nana
HNAJ_0000973501
I
0.877
HmN_000790000
Hymenolepis microstoma
HmN_000790000
I
0.877
HDID_0000068701
Hymenolepis diminuta
HDID_0000068701
I
0.869
SPER_0000558501
Spirometra erinaceieuropaei
SPER_0000558501
I
0.824
Sjc_0130210
Schistosoma japonicum
Sjc_0130210
I
0.766
SROB_0000638901
Schistosoma rodhaini
SROB_0000638901
I
0.745
SMTD_0000935101
Schistosoma mattheei
SMTD_0000935101
I
0.745
A_06411
Schistosoma haematobium
A_06411
I
0.738
A_07565
Schistosoma haematobium
A_07565
I
0.738
Smp_174320
Schistosoma mansoni
Smp_174320
D
0.736
csin105545
Clonorchis sinensis
csin105545
I
0.723
ENSSSCG00000025551
Sus scrofa
ENSSSCG00000025551
I
0.702