SROB_0000638901 (Schistosoma rodhaini)
Runt

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00853 (Runt) IPR013524 SROB_0000638901 T319850_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Smp_174320
M02457_2.00 		Schistosoma mansoni
NNAACCGCARN
NYTGCGGTTNN		 PBM
Weirauch et al.(2014)
pTH8368 		0.989 0.989
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SROB_0000638901-mRNA-1 Runt 11 104

Links

Other Runt family TFs
Other Schistosoma rodhaini TFs

20 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SMTD_0000935101 Schistosoma mattheei SMTD_0000935101 I 0.989
A_06411 Schistosoma haematobium A_06411 I 0.989
A_07565 Schistosoma haematobium A_07565 I 0.989
Sjc_0130210 Schistosoma japonicum Sjc_0130210 I 0.979
TRE_0000705801 Trichobilharzia regenti TRE_0000705801 I 0.979
T265_03056 Opisthorchis viverrini T265_03056 I 0.894
D915_03512 Fasciola hepatica D915_03512 I 0.788
DILT_0000572101 Diphyllobothrium latum DILT_0000572101 I 0.766
SSLN_0000508301 Schistocephalus solidus SSLN_0000508301 I 0.766
PXEA_0003260001 Protopolystoma xenopodis PXEA_0003260001 N 0.755
SPER_0000558501 Spirometra erinaceieuropaei SPER_0000558501 I 0.755
HmN_000789900 Hymenolepis microstoma HmN_000789900 I 0.745
EmuJ_000490800 Echinococcus multilocularis EmuJ_000490800 I 0.745
HNAJ_0001011401 Hymenolepis nana HNAJ_0001011401 I 0.745
HDID_0000068701 Hymenolepis diminuta HDID_0000068701 I 0.734
TsM_000741200 Taenia solium TsM_000741200 I 0.734
MCOS_0000437401 Mesocestoides corti MCOS_0000437401 I 0.734
HmN_000790000 Hymenolepis microstoma HmN_000790000 I 0.723
HNAJ_0000973501 Hymenolepis nana HNAJ_0000973501 I 0.723
Smp_174320 Schistosoma mansoni Smp_174320 D 0.721