TRE_0000705801 (Trichobilharzia regenti)
Runt

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00853 (Runt) IPR013524 TRE_0000705801 T319860_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Smp_174320
M02457_2.00
Schistosoma mansoni
NNAACCGCARN

NYTGCGGTTNN
PBM
Weirauch et al.(2014)
pTH8368
0.979 0.979
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TRE_0000705801-mRNA-1 Runt 11 105

Links

Other Runt family TFs
Other Trichobilharzia regenti TFs

14 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
SMTD_0000935101 Schistosoma mattheei SMTD_0000935101 I 0.989
SROB_0000638901 Schistosoma rodhaini SROB_0000638901 I 0.979
Sjc_0130210 Schistosoma japonicum Sjc_0130210 I 0.968
T265_03056 Opisthorchis viverrini T265_03056 I 0.863
D915_03512 Fasciola hepatica D915_03512 I 0.798
PXEA_0003260001 Protopolystoma xenopodis PXEA_0003260001 N 0.768
EmuJ_000490800 Echinococcus multilocularis EmuJ_000490800 I 0.747
TsM_000741200 Taenia solium TsM_000741200 I 0.737
HDID_0000068701 Hymenolepis diminuta HDID_0000068701 I 0.737
MCOS_0000437401 Mesocestoides corti MCOS_0000437401 I 0.737
HmN_000789900 Hymenolepis microstoma HmN_000789900 I 0.726
Smp_174320 Schistosoma mansoni Smp_174320 D 0.721
A_06411 Schistosoma haematobium A_06411 I 0.715
A_07565 Schistosoma haematobium A_07565 I 0.715