NLP1 (Arabidopsis thaliana)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02042 (RWP-RK) IPR003035 AT2G17150 T319895_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Encodes a SUMO ligase that directs the attachment of the small protein SUMO to target proteins via an isopeptide bond. This enzyme is localized to the nucleus and plants with reduced levels of this protein show higher sensitivity to ABA in root growth inhibition assays. It has high similarity to the yeast UBC9 SUMO ligase and is sometimes referred to by that name.

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NLP4
M07248_2.00 		Arabidopsis thaliana
NNHNNBTGCTGYHNN
NNDRCAGCAVNNDNN		 Dap-seq
OMalley et al.(2016)
AtNLP4_col_b 		0.918 0.918
NLP7
M07251_2.00 		Arabidopsis thaliana
WNDTGNCYYTTSRDD
HHYSAARRGNCAHNW		 Dap-seq
OMalley et al.(2016)
NLP7_col_a 		0.857 0.857
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT2G17150.1 RWP-RK 608 656
AT2G17150.2 RWP-RK 605 636
AT2G17150.3 RWP-RK 608 639
AT2G17150.4 RWP-RK 353 401
AT2G17150.5 RWP-RK 608 639
AT2G17150.6 RWP-RK 608 656

Links

Other RWP-RK family TFs
Other Arabidopsis thaliana TFs

Invalid Input OrderBy

418 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action