Bo5g030540 (Brassica oleracea)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02042 (RWP-RK) IPR003035 Bo5g030540 T319927_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NLP4
M07248_2.00
Arabidopsis thaliana
NNHNNBTGCTGYHNN

NNDRCAGCAVNNDNN
Dap-seq
OMalley et al.(2016)
AtNLP4_col_b
0.980 0.980
NLP7
M07251_2.00
Arabidopsis thaliana
WNDTGNCYYTTSRDD

HHYSAARRGNCAHNW
Dap-seq
OMalley et al.(2016)
NLP7_col_a
0.878 0.878
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo5g030540.1 RWP-RK 531 579

Links

Other RWP-RK family TFs
Other Brassica oleracea TFs

416 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AAEL008660 Aedes aegypti AAEL008660 I 0.000
AALB002674 Anopheles albimanus AALB002674 I 0.000
AARA001906 Anopheles arabiensis AARA001906 I 0.000
AATE014019 Anopheles atroparvus AATE014019 I 0.000
ACHR004799 Anopheles christyi ACHR004799 I 0.000
ACOM034154 Anopheles coluzzii ACOM034154 I 0.000
ACUA004590 Anopheles culicifacies ACUA004590 I 0.000
ACYPI37626 Acyrthosiphon pisum ACYPI37626 I 0.000
ADAC008497 Anopheles darlingi ADAC008497 I 0.000
ADIR010545 Anopheles dirus ADIR010545 I 0.000
AEPI006242 Anopheles epiroticus AEPI006242 I 0.000
AFAF002909 Anopheles farauti AFAF002909 I 0.000
AFUN008310 Anopheles funestus AFUN008310 I 0.000
AGAP001448 Anopheles gambiae AGAP001448 I 0.000
AMAM018725 Anopheles maculatus AMAM018725 I 0.000
AMEC009154 Anopheles melas AMEC009154 I 0.000
AMEM011331 Anopheles merus AMEM011331 I 0.000
AMIN003266 Anopheles minimus AMIN003266 I 0.000
AQUA006634 Anopheles quadriannulatus AQUA006634 I 0.000
ASIS019386 Anopheles sinensis ASIS019386 I 0.000
BGLB003958 Biomphalaria glabrata BGLB003958 I 0.000
CapteG59283 Capitella teleta CapteG59283 I 0.000
CGI_10017809 Crassostrea gigas CGI_10017809 I 0.000
CLEC012470 Cimex lectularius CLEC012470 I 0.000
CPIJ006258 Culex quinquefasciatus CPIJ006258 I 0.000
CpipJ_CPIJ006258 Culex pipiens CpipJ_CPIJ006258 I 0.000
csin111295 Clonorchis sinensis csin111295 I 0.000
D915_00775 Fasciola hepatica D915_00775 I 0.000
D917_00545 Trichinella nativa D917_00545 I 0.000
D918_01499 Trichuris suis D918_01499 I 0.000
DAPPUDRAFT_18360 Daphnia pulex DAPPUDRAFT_18360 I 0.000
DILT_0001058801 Diphyllobothrium latum DILT_0001058801 I 0.000
ECANG7_07852 Echinococcus canadensis ECANG7_07852 I 0.000
ECPE_0000418201 Echinostoma caproni ECPE_0000418201 I 0.000
EFV58245 Trichinella spiralis EFV58245 I 0.000
EmuJ_000998300 Echinococcus multilocularis EmuJ_000998300 I 0.000
ENSAMEG00000006374 Ailuropoda melanoleuca ENSAMEG00000006374 I 0.000
ENSAMXG00000008222 Astyanax mexicanus ENSAMXG00000008222 I 0.000
ENSCSAG00000012422 Chlorocebus sabaeus ENSCSAG00000012422 I 0.000
ENSFALG00000007280 Ficedula albicollis ENSFALG00000007280 I 0.000
ENSGMOG00000016849 Gadus morhua ENSGMOG00000016849 I 0.000
ENSLACG00000013727 Latimeria chalumnae ENSLACG00000013727 I 0.000
ENSLOCG00000003186 Lepisosteus oculatus ENSLOCG00000003186 I 0.000
ENSMEUG00000004292 Macropus eugenii ENSMEUG00000004292 I 0.000
ENSNLEG00000012897 Nomascus leucogenys ENSNLEG00000012897 I 0.000
ENSONIG00000016978 Oreochromis niloticus ENSONIG00000016978 I 0.000
ENSPANG00000023093 Papio anubis ENSPANG00000023093 I 0.000
ENSPFOG00000002486 Poecilia formosa ENSPFOG00000002486 I 0.000
ENSPMAG00000003727 Petromyzon marinus ENSPMAG00000003727 I 0.000
ENSPPYG00000002150 Pongo abelii ENSPPYG00000002150 I 0.000
ENSPSIG00000007810 Pelodiscus sinensis ENSPSIG00000007810 I 0.000
ENSPVAG00000013738 Pteropus vampyrus ENSPVAG00000013738 I 0.000
ENSSTOG00000022679 Ictidomys tridecemlineatus ENSSTOG00000022679 I 0.000
ENSTGUG00000001180 Taeniopygia guttata ENSTGUG00000001180 I 0.000
ENSXMAG00000015151 Xiphophorus maculatus ENSXMAG00000015151 I 0.000
estExt_fgenesh2_pg.C_640081 Branchiostoma floridae estExt_fgenesh2_pg.C_640081 I 0.000
estExt_GenewiseH_1.C_3210010 Branchiostoma floridae estExt_GenewiseH_1.C_3210010 I 0.000
estExt_GenewiseH_1.C_3210011 Branchiostoma floridae estExt_GenewiseH_1.C_3210011 I 0.000
Fer1 Drosophila melanogaster FBgn0037475 D 0.000
GA27498 Drosophila pseudoobscura FBgn0248864 I 0.000
GD19915 Drosophila simulans FBgn0191398 I 0.000
GE24907 Drosophila yakuba FBgn0242002 I 0.000
GF17655 Drosophila ananassae FBgn0094673 I 0.000
GG13863 Drosophila erecta FBgn0106126 I 0.000
GH19006 Drosophila grimshawi FBgn0126473 I 0.000
GI23061 Drosophila mojavensis FBgn0145788 I 0.000
GJ24574 Drosophila virilis FBgn0211653 I 0.000
GK14521 Drosophila willistoni FBgn0216527 I 0.000
GL12422 Drosophila persimilis FBgn0150028 I 0.000
GM10936 Drosophila sechellia FBgn0165881 I 0.000
HelroG86431 Helobdella robusta HelroG86431 I 0.000
HmN_000218700 Hymenolepis microstoma HmN_000218700 I 0.000
ISCW003737 Ixodes scapularis ISCW003737 I 0.000
KGM_14030 Danaus plexippus KGM_14030 I 0.000
L798_11980 Zootermopsis nevadensis L798_11980 I 0.000
LCUP002382 Lucilia cuprina LCUP002382 I 0.000
LDEC016362 Leptinotarsa decemlineata LDEC016362 I 0.000
LLOJ003726 Lutzomyia longipalpis LLOJ003726 I 0.000
LLOJ004204 Lutzomyia longipalpis LLOJ004204 I 0.000
LLOJ005004 Lutzomyia longipalpis LLOJ005004 I 0.000
LotgiG66849 Lottia gigantea LotgiG66849 I 0.000
MCOS_0000879301 Mesocestoides corti MCOS_0000879301 I 0.000
MDOA013156 Musca domestica MDOA013156 I 0.000
MESCA008421 Megaselia scalaris MESCA008421 I 0.000
NEMVEDRAFT_v1g97005 Nematostella vectensis NEMVEDRAFT_v1g97005 I 0.000
Ocbimv22012139m.g Octopus bimaculoides Ocbimv22012139m.g I 0.000
PHUM498120 Pediculus humanus PHUM498120 I 0.000
PPAI005132 Phlebotomus papatasi PPAI005132 I 0.000
PTF1A Monodelphis domestica ENSMODG00000008946 I 0.000
Ptf1a Mus musculus ENSMUSG00000026735 D 0.000
PTF1A Anolis carolinensis ENSACAG00000008717 I 0.000
PTF1A Otolemur garnettii ENSOGAG00000024685 I 0.000
ptf1a Oryzias latipes ENSORLG00000008277 I 0.000
PTF1A Myotis lucifugus ENSMLUG00000010122 I 0.000
PTF1A Cavia porcellus ENSCPOG00000022828 I 0.000
PTF1A Callithrix jacchus ENSCJAG00000007862 I 0.000
ptf1a Danio rerio ENSDARG00000014479 I 0.000
PTF1A Dasypus novemcinctus ENSDNOG00000035978 I 0.000
PTF1A Equus caballus ENSECAG00000012711 I 0.000
PTF1A Homo sapiens ENSG00000168267 D 0.000
ptf1a Gasterosteus aculeatus ENSGACG00000014760 I 0.000
PTF1A Gorilla gorilla ENSGGOG00000015210 I 0.000
PTF1A Loxodonta africana ENSLAFG00000012682 I 0.000
PTF1A Procavia capensis ENSPCAG00000005440 I 0.000
Ptf1a Rattus norvegicus ENSRNOG00000016902 I 0.000
PTF1A Tursiops truncatus ENSTTRG00000016843 I 0.000
PTF1A Bos taurus ENSBTAG00000047315 I 0.000
ptf1a Xenopus tropicalis XB-GENE-484425 I 0.000
ptf1a Takifugu rubripes ENSTRUG00000007713 I 0.000
PTF1A Sus scrofa ENSSSCG00000030662 I 0.000
ptf1a.S Xenopus laevis XB-GENE-6466546 I 0.000
Pvit_04136 Pogona vitticeps Pvit_04136 I 0.000
RPRC001881 Rhodnius prolixus RPRC001881 I 0.000
Sakowv30041452m.g Saccoglossus kowalevskii Sakowv30041452m.g I 0.000
SBAD_0000858001 Soboliphyme baturini SBAD_0000858001 I 0.000
SMAR009985 Strigamia maritima SMAR009985 I 0.000
SMAR011911 Strigamia maritima SMAR011911 I 0.000
SMU15024587 Schmidtea mediterranea SMU15024587 I 0.000
SMU15028020 Schmidtea mediterranea SMU15028020 I 0.000
SMU15033768 Schmidtea mediterranea SMU15033768 I 0.000
SPU_002677 Strongylocentrotus purpuratus SPU_002677 I 0.000
SROB_0001629701 Schistosoma rodhaini SROB_0001629701 I 0.000
T265_12589 Opisthorchis viverrini T265_12589 I 0.000
TC014105 Tribolium castaneum TC014105 I 0.000
TMUE_s0036001100 Trichuris muris TMUE_s0036001100 I 0.000
YQE_02105 Dendroctonus ponderosae YQE_02105 I 0.000