Bo7g064180 (Brassica oleracea)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02042 (RWP-RK) IPR003035 Bo7g064180 T319932_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RKD2
M07249_2.00
Arabidopsis thaliana
NHGWCBNTTCRDCTTCYHN

NDRGAAGHYGAANVGWCDN
Dap-seq
OMalley et al.(2016)
RKD2_col_a
0.714 0.714
RKD2
M07250_2.00
Arabidopsis thaliana
GWCBBTTCRDMTTCC

GGAAKHYGAAVVGWC
Dap-seq
OMalley et al.(2016)
RKD2_colamp_a
0.714 0.714
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo7g064180.1 RWP-RK 152 200

Links

Other RWP-RK family TFs
Other Brassica oleracea TFs

62 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000004562 Ailuropoda melanoleuca ENSAMEG00000004562 N 0.000
MBD4 Bos taurus ENSBTAG00000021645 N 0.000
MBD4 Canis familiaris ENSCAFG00000004867 N 0.000
MBD4 Callithrix jacchus ENSCJAG00000017293 N 0.000
ENSCPOG00000004970 Cavia porcellus ENSCPOG00000004970 N 0.000
ENSCSAG00000009037 Chlorocebus sabaeus ENSCSAG00000009037 N 0.000
MBD4 Dasypus novemcinctus ENSDNOG00000049619 N 0.000
MBD4 Equus caballus ENSECAG00000022106 N 0.000
MBD4 Erinaceus europaeus ENSEEUG00000011459 N 0.000
MBD4 Homo sapiens ENSG00000129071 N 0.000
MBD4 Gorilla gorilla ENSGGOG00000010698 N 0.000
MBD4 Loxodonta africana ENSLAFG00000010609 N 0.000
MBD4 Microcebus murinus ENSMICG00000008022 N 0.000
MBD4 Myotis lucifugus ENSMLUG00000014766 N 0.000
MBD4 Macaca mulatta ENSMMUG00000012723 N 0.000
MBD4 Monodelphis domestica ENSMODG00000006399 N 0.000
ENSMPUG00000017195 Mustela putorius furo ENSMPUG00000017195 N 0.000
Mbd4 Mus musculus ENSMUSG00000030322 N 0.000
ENSNLEG00000005337 Nomascus leucogenys ENSNLEG00000005337 N 0.000
ENSOARG00000014699 Ovis aries ENSOARG00000014699 N 0.000
MBD4 Oryctolagus cuniculus ENSOCUG00000013006 N 0.000
MBD4 Otolemur garnettii ENSOGAG00000010236 N 0.000
MBD4 Ochotona princeps ENSOPRG00000000473 N 0.000
ENSP00000249910 Macaca fascicularis ENSP00000249910 N 0.000
ENSPANG00000015047 Papio anubis ENSPANG00000015047 N 0.000
MBD4 Procavia capensis ENSPCAG00000012915 N 0.000
ENSPPYG00000013417 Pongo abelii ENSPPYG00000013417 N 0.000
MBD4 Pan troglodytes ENSPTRG00000015377 N 0.000
MBD4 Pteropus vampyrus ENSPVAG00000005238 N 0.000
Mbd4 Rattus norvegicus ENSRNOG00000010919 N 0.000
ENSSHAG00000012953 Sarcophilus harrisii ENSSHAG00000012953 N 0.000
ENSSTOG00000020663 Ictidomys tridecemlineatus ENSSTOG00000020663 N 0.000
MBD4 Tupaia belangeri ENSTBEG00000003041 N 0.000
ENSTSYG00000011147 Tarsius syrichta ENSTSYG00000011147 N 0.000
MBD4 Tursiops truncatus ENSTTRG00000011265 N 0.000
MBD4 Vicugna pacos ENSVPAG00000004040 N 0.000
Myotis_brandtii_MBD4_10028283 Myotis brandtii Myotis_brandtii_MBD4_10028283 N 0.000