fgenesh2_kg.1__2057__AT1G18790.1 (Arabidopsis lyrata)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02042 (RWP-RK) IPR003035 fgenesh2_kg.1__2057__AT1G18790.1 T320039_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RKD2
M07249_2.00
Arabidopsis thaliana
NHGWCBNTTCRDCTTCYHN

NDRGAAGHYGAANVGWCDN
Dap-seq
OMalley et al.(2016)
RKD2_col_a
0.857 0.857
RKD2
M07250_2.00
Arabidopsis thaliana
GWCBBTTCRDMTTCC

GGAAKHYGAAVVGWC
Dap-seq
OMalley et al.(2016)
RKD2_colamp_a
0.857 0.857
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.1__2057__AT1G18790.1 RWP-RK 128 176

Links

Other RWP-RK family TFs
Other Arabidopsis lyrata TFs

82 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
MYRF Homo sapiens ENSG00000124920 D 0.000
Myrf Mus musculus ENSMUSG00000036098 D 0.000
myrf Danio rerio ENSDARG00000078676 D 0.000
ENSSTOG00000000529 Ictidomys tridecemlineatus ENSSTOG00000000529 I 0.000
MYRF Sus scrofa ENSSSCG00000013078 I 0.000
ENSSHAG00000002443 Sarcophilus harrisii ENSSHAG00000002443 I 0.000
Myrf Rattus norvegicus ENSRNOG00000028274 I 0.000
MYRF Pteropus vampyrus ENSPVAG00000012342 I 0.000
MYRF Pan troglodytes ENSPTRG00000003749 I 0.000
ENSPSIG00000015590 Pelodiscus sinensis ENSPSIG00000015590 I 0.000
ENSPPYG00000003180 Pongo abelii ENSPPYG00000003180 I 0.000
ENSPFOG00000011050 Poecilia formosa ENSPFOG00000011050 I 0.000
MYRF Procavia capensis ENSPCAG00000017079 I 0.000
ENSPANG00000013413 Papio anubis ENSPANG00000013413 I 0.000
MYRF Oryzias latipes ENSORLG00000006459 I 0.000
ENSTGUG00000006600 Taeniopygia guttata ENSTGUG00000006600 I 0.000
myrf.L Xenopus laevis XB-GENE-1020972 I 0.000
MYRF Tetraodon nigroviridis ENSTNIG00000016074 I 0.000
myrf Xenopus tropicalis XB-GENE-1020968 I 0.000
Tal_R006175 Tyto alba Tal_R006175 I 0.000
Pvit_15884 Pogona vitticeps Pvit_15884 I 0.000
Gfo_R011942 Geospiza fortis Gfo_R011942 I 0.000
ENSP00000278836 Macaca fascicularis ENSP00000278836 I 0.000
ENSBTAP00000009187-D1 Bos grunniens ENSBTAP00000009187-D1 I 0.000
Cmyd_10008461 Chelonia mydas Cmyd_10008461 I 0.000
Brh_R007745 Buceros rhinoceros Brh_R007745 I 0.000
Alligator_sinensis_CCG012901.1 Alligator sinensis Alligator_sinensis_CCG012901.1 I 0.000
Afo_R010549 Aptenodytes forsteri Afo_R010549 I 0.000
Aan_R010750 Calypte anna Aan_R010750 I 0.000
ENSXMAG00000003748 Xiphophorus maculatus ENSXMAG00000003748 I 0.000
MYRF Takifugu rubripes ENSTRUG00000005197 I 0.000
ENSONIG00000015523 Oreochromis niloticus ENSONIG00000015523 I 0.000
MYRF Otolemur garnettii ENSOGAG00000010786 I 0.000
ENSFALG00000011806 Ficedula albicollis ENSFALG00000011806 I 0.000
MYRF Equus caballus ENSECAG00000021799 I 0.000
Myrf Dipodomys ordii ENSDORG00000002029 I 0.000
MYRF Dasypus novemcinctus ENSDNOG00000005294 I 0.000
ENSCSAG00000006452 Chlorocebus sabaeus ENSCSAG00000006452 I 0.000
MYRF Cavia porcellus ENSCPOG00000013543 I 0.000
MYRF Callithrix jacchus ENSCJAG00000019218 I 0.000
MYRF Canis familiaris ENSCAFG00000016062 I 0.000
MYRF Bos taurus ENSBTAG00000006990 I 0.000
ENSAPLG00000006054 Anas platyrhynchos ENSAPLG00000006054 I 0.000
ENSAMXG00000015793 Astyanax mexicanus ENSAMXG00000015793 I 0.000
ENSAMEG00000016669 Ailuropoda melanoleuca ENSAMEG00000016669 I 0.000
MYRF Felis catus ENSFCAG00000013683 I 0.000
myrf Gasterosteus aculeatus ENSGACG00000005416 I 0.000
MYRF Oryctolagus cuniculus ENSOCUG00000003269 I 0.000
ENSOARG00000013482 Ovis aries ENSOARG00000013482 I 0.000
ENSNLEG00000003069 Nomascus leucogenys ENSNLEG00000003069 I 0.000
ENSMPUG00000014126 Mustela putorius furo ENSMPUG00000014126 I 0.000
MYRF Macaca mulatta ENSMMUG00000006655 I 0.000
MYRF Anolis carolinensis ENSACAG00000017691 I 0.000
ENSMMUG00000006501 Macaca mulatta ENSMMUG00000006501 I 0.000
MYRF Myotis lucifugus ENSMLUG00000010326 I 0.000
MYRF Meleagris gallopavo ENSMGAG00000004733 I 0.000
ENSMEUG00000004200 Macropus eugenii ENSMEUG00000004200 I 0.000
ENSLACG00000016455 Latimeria chalumnae ENSLACG00000016455 I 0.000
MYRF Gorilla gorilla ENSGGOG00000012529 I 0.000
ENSGALG00000020522 Gallus gallus ENSGALG00000020522 I 0.000
Sakowv30007714m.g Saccoglossus kowalevskii Sakowv30007714m.g N 0.000
ENSCING00000025073 Ciona intestinalis ENSCING00000025073 N 0.000