fgenesh2_kg.1__2057__AT1G18790.1 (Arabidopsis lyrata)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02042 (RWP-RK) IPR003035 fgenesh2_kg.1__2057__AT1G18790.1 T320039_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RKD2
M07249_2.00
Arabidopsis thaliana
NHGWCBNTTCRDCTTCYHN

NDRGAAGHYGAANVGWCDN
Dap-seq
OMalley et al.(2016)
RKD2_col_a
0.857 0.857
RKD2
M07250_2.00
Arabidopsis thaliana
GWCBBTTCRDMTTCC

GGAAKHYGAAVVGWC
Dap-seq
OMalley et al.(2016)
RKD2_colamp_a
0.857 0.857
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.1__2057__AT1G18790.1 RWP-RK 128 176

Links

Other RWP-RK family TFs
Other Arabidopsis lyrata TFs

82 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMXG00000014036 Astyanax mexicanus ENSAMXG00000014036 N 0.000
ENSGMOG00000009994 Gadus morhua ENSGMOG00000009994 N 0.000
ENSLOCG00000008937 Lepisosteus oculatus ENSLOCG00000008937 N 0.000
ENSONIG00000014410 Oreochromis niloticus ENSONIG00000014410 N 0.000
ENSPFOG00000004698 Poecilia formosa ENSPFOG00000004698 N 0.000
foxh1 Oryzias latipes ENSORLG00000007331 N 0.000
foxh1 Danio rerio ENSDARG00000055630 N 0.000
foxh1 Tetraodon nigroviridis ENSTNIG00000008148 N 0.000
foxh1 Takifugu rubripes ENSTRUG00000006708 N 0.000
foxh1 Xenopus tropicalis XB-GENE-1194372 I 0.000
foxh1.2.L Xenopus laevis XB-GENE-6461998 I 0.000
foxh1.L Xenopus laevis XB-GENE-1194377 I 0.000
Pvit_18746 Pogona vitticeps Pvit_18746 I 0.000