CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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maker-pir_contig_135-fgenesh-gene-0.6
(
Pythium irregulare
)
RWP-RK
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02042 (RWP-RK)
IPR003035
maker-pir_contig_135-fgenesh-gene-0.6
T320495_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EPrPI00000016110
RWP-RK
15
62
DFDLAELQQYYHLPLREAARRLGSCEAVIKRVCRRKQIQRWPYRQVSS
Links
Other
RWP-RK
family TFs
Other
Pythium irregulare
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PYU1_G005435
Pythium ultimum
PYU1_G005435
N
0.979
estExt_fgenesh1_kg.C_20917
Phytophthora capsici
estExt_fgenesh1_kg.C_20917
N
0.917
Phyra85870
Phytophthora ramorum
Phyra85870
N
0.917
Phyra87850
Phytophthora ramorum
Phyra87850
N
0.917
F443_06472
Phytophthora parasitica
F443_06472
N
0.917
PITG_05406
Phytophthora infestans
PITG_05406
N
0.917
fgenesh_scip_prom.28083.7841
Phytophthora lateralis
fgenesh_scip_prom.28083.7841
N
0.917
fgenesh_scip_prom.46568.5451
Phytophthora kernoviae
fgenesh_scip_prom.46568.5451
N
0.917
HpaG808904
Hyaloperonospora arabidopsidis
HpaG808904
N
0.896
maker-pag1_scaffold_16-fgenesh-gene-1.3
Pythium aphanidermatum
maker-pag1_scaffold_16-fgenesh-gene-1.3
N
0.792
maker-par_contig_435-fgenesh-gene-0.0
Pythium arrhenomanes
maker-par_contig_435-fgenesh-gene-0.0
N
0.763
maker-piw_contig_221-fgenesh-gene-0.2
Pythium iwayamai
maker-piw_contig_221-fgenesh-gene-0.2
N
0.708