CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MLOC_66539
(
Hordeum vulgare
)
RWP-RK
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02042 (RWP-RK)
IPR003035
MLOC_66539
T320535_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NLP7
M07251_2.00
Arabidopsis thaliana
WNDTGNCYYTTSRDD
HHYSAARRGNCAHNW
Dap-seq
OMalley et al.(2016)
NLP7_col_a
0.898
0.898
NLP4
M07248_2.00
Arabidopsis thaliana
NNHNNBTGCTGYHNN
NNDRCAGCAVNNDNN
Dap-seq
OMalley et al.(2016)
AtNLP4_col_b
0.796
0.796
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MLOC_66539.1
RWP-RK
402
450
TISLEVLQQYFSGSLKNAAKSLGVCPTTMKRICRQHGISRWPSRKINKV
MLOC_66539.2
RWP-RK
233
281
TISLEVLQQYFSGSLKNAAKSLGVCPTTMKRICRQHGISRWPSRKINKA
MLOC_66539.3
RWP-RK
402
450
TISLEVLQQYFSGSLKNAAKSLGVCPTTMKRICRQHGISRWPSRKINKV
MLOC_66539.4
RWP-RK
402
450
TISLEVLQQYFSGSLKNAAKSLGVCPTTMKRICRQHGISRWPSRKINKA
MLOC_66539.5
RWP-RK
233
281
TISLEVLQQYFSGSLKNAAKSLGVCPTTMKRICRQHGISRWPSRKINKV
MLOC_66539.6
RWP-RK
295
343
TISLEVLQQYFSGSLKNAAKSLGVCPTTMKRICRQHGISRWPSRKINKV
MLOC_66539.7
RWP-RK
233
262
TISLEVLQQYFSGSLKNAAKSLGGTLLIFT
Links
Other
RWP-RK
family TFs
Other
Hordeum vulgare
TFs
418 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy