MTR_3g435550 (Medicago truncatula)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02042 (RWP-RK) IPR003035 MTR_3g435550 T320545_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RKD2
M07249_2.00
Arabidopsis thaliana
NHGWCBNTTCRDCTTCYHN

NDRGAAGHYGAANVGWCDN
Dap-seq
OMalley et al.(2016)
RKD2_col_a
0.776 0.776
RKD2
M07250_2.00
Arabidopsis thaliana
GWCBBTTCRDMTTCC

GGAAKHYGAAVVGWC
Dap-seq
OMalley et al.(2016)
RKD2_colamp_a
0.776 0.776
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KEH33319 RWP-RK 58 106

Links

Other RWP-RK family TFs
Other Medicago truncatula TFs

65 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
LOC_Os08g36920 Oryza sativa LOC_Os08g36920 D 0.000
ABR1 Arabidopsis thaliana AT5G64750 D 0.000
ERF115 Arabidopsis thaliana AT5G07310 D 0.000
RAP2-6 Arabidopsis thaliana AT1G43160 D 0.000
Bostr.0568s0320 Boechera stricta Bostr.0568s0320 I 0.000
Aquca_043_00039 Aquilegia coerulea Aquca_043_00039 I 0.000
Aquca_023_00168 Aquilegia coerulea Aquca_023_00168 I 0.000
mgf019280m Mimulus guttatus mgf019280m I 0.000
mgf000075m Mimulus guttatus mgf000075m I 0.000
Cucsa.365850 Cucumis sativus Cucsa.365850 I 0.000
Cucsa.363830 Cucumis sativus Cucsa.363830 I 0.000
Cucsa.349200 Cucumis sativus Cucsa.349200 I 0.000
Cucsa.250290 Cucumis sativus Cucsa.250290 I 0.000
Cucsa.156890 Cucumis sativus Cucsa.156890 I 0.000
Cucsa.101370 Cucumis sativus Cucsa.101370 I 0.000
cassava8409.m1 Manihot esculenta cassava8409.m1 I 0.000
cassava45576.m1 Manihot esculenta cassava45576.m1 I 0.000
cassava21882.m1 Manihot esculenta cassava21882.m1 I 0.000
cassava19959.m1 Manihot esculenta cassava19959.m1 I 0.000
Ciclev10001138m.g Citrus clementina Ciclev10001138m.g I 0.000
Bostr.13129s0235 Boechera stricta Bostr.13129s0235 I 0.000
Carubv10028647m.g Capsella rubella Carubv10028647m.g I 0.000
Carubv10027012m.g Capsella rubella Carubv10027012m.g I 0.000
Carubv10026540m.g Capsella rubella Carubv10026540m.g I 0.000
Carubv10010478m.g Capsella rubella Carubv10010478m.g I 0.000
Carubv10002723m.g Capsella rubella Carubv10002723m.g I 0.000
Cagra.4553s0019 Capsella grandiflora Cagra.4553s0019 I 0.000
Cagra.3842s0001 Capsella grandiflora Cagra.3842s0001 I 0.000
Bostr.12302s0024 Boechera stricta Bostr.12302s0024 I 0.000
Cagra.2662s0009 Capsella grandiflora Cagra.2662s0009 I 0.000
Cagra.2438s0028 Capsella grandiflora Cagra.2438s0028 I 0.000
Cagra.14503s0008 Capsella grandiflora Cagra.14503s0008 I 0.000
Bostr.7200s0089 Boechera stricta Bostr.7200s0089 I 0.000
Bostr.26833s0047 Boechera stricta Bostr.26833s0047 I 0.000
Bostr.15774s0146 Boechera stricta Bostr.15774s0146 I 0.000
cassava19043.valid.m1 Manihot esculenta cassava19043.valid.m1 I 0.000
cassava19042.valid.m1 Manihot esculenta cassava19042.valid.m1 I 0.000
Ca_19135 Cicer arietinum Ca_19135 I 0.000
Ca_18387 Cicer arietinum Ca_18387 I 0.000
Ca_09638 Cicer arietinum Ca_09638 I 0.000
Ca_04370 Cicer arietinum Ca_04370 I 0.000
Ca_04147 Cicer arietinum Ca_04147 I 0.000
Ca_01387 Cicer arietinum Ca_01387 I 0.000
ERF110 Vitis vinifera VIT_18s0072g00260 I 0.000
VIT_14s0068g01040 Vitis vinifera VIT_14s0068g01040 I 0.000
ABR1 Vitis vinifera VIT_07s0031g01980 I 0.000
VIT_07s0031g00720 Vitis vinifera VIT_07s0031g00720 I 0.000
VIT_07s0031g00710 Vitis vinifera VIT_07s0031g00710 I 0.000
RRTF1 Vitis vinifera VIT_03s0063g00460 I 0.000
Traes_5BS_80C46D9C4 Triticum aestivum Traes_5BS_80C46D9C4 I 0.000
Traes_5BL_60FC12DA6 Triticum aestivum Traes_5BL_60FC12DA6 I 0.000
Ca_21773 Cicer arietinum Ca_21773 I 0.000
Cla003851 Citrullus lanatus Cla003851 I 0.000
Cla007205 Citrullus lanatus Cla007205 I 0.000
cassava14079.valid.m1 Manihot esculenta cassava14079.valid.m1 I 0.000
cassava12737.valid.m1 Manihot esculenta cassava12737.valid.m1 I 0.000
cassava10717.m1 Manihot esculenta cassava10717.m1 I 0.000
30147.m014403 Ricinus communis 30147.m014403 I 0.000
30131.m006971 Ricinus communis 30131.m006971 I 0.000
29863.m001066 Ricinus communis 29863.m001066 I 0.000
27965.m000108 Ricinus communis 27965.m000108 I 0.000
Pm028829 Prunus mume Pm028829 I 0.000
Pm024604 Prunus mume Pm024604 I 0.000
Pm022509 Prunus mume Pm022509 I 0.000
Cla019618 Citrullus lanatus Cla019618 I 0.000
Cla014021 Citrullus lanatus Cla014021 I 0.000
Cla008608 Citrullus lanatus Cla008608 I 0.000
Cla007885 Citrullus lanatus Cla007885 I 0.000
TCM_035671 Theobroma cacao TCM_035671 I 0.000
Ciclev10003903m.g Citrus clementina Ciclev10003903m.g I 0.000
LjT03L06.60.nd Lotus japonicus LjT03L06.60.nd I 0.000
Pavir.J17038 Panicum virgatum Pavir.J17038 I 0.000
Pavir.J04335 Panicum virgatum Pavir.J04335 I 0.000
Pavir.J03755 Panicum virgatum Pavir.J03755 I 0.000
Pavir.J02402 Panicum virgatum Pavir.J02402 I 0.000
Pavir.Hb01784 Panicum virgatum Pavir.Hb01784 I 0.000
Pavir.Ha01720 Panicum virgatum Pavir.Ha01720 I 0.000
Pavir.Ea03713 Panicum virgatum Pavir.Ea03713 I 0.000
Pavir.Cb02005 Panicum virgatum Pavir.Cb02005 I 0.000
Pavir.Aa02595 Panicum virgatum Pavir.Aa02595 I 0.000
orange1.1g039390m.g Citrus sinensis orange1.1g039390m.g I 0.000
orange1.1g036963m.g Citrus sinensis orange1.1g036963m.g I 0.000
orange1.1g013225m.g Citrus sinensis orange1.1g013225m.g I 0.000
orange1.1g005229m.g Citrus sinensis orange1.1g005229m.g I 0.000
MDP0000894895 Malus domestica MDP0000894895 I 0.000
SapurV1A.0134s0150 Salix purpurea SapurV1A.0134s0150 I 0.000
SapurV1A.0327s0220 Salix purpurea SapurV1A.0327s0220 I 0.000
chr5.CM0052.240.nd Lotus japonicus chr5.CM0052.240.nd I 0.000
chr4.CM0175.50.nd Lotus japonicus chr4.CM0175.50.nd I 0.000
chr2.LjT11L13.40.nc Lotus japonicus chr2.LjT11L13.40.nc I 0.000
chr1.CM1880.220.nd Lotus japonicus chr1.CM1880.220.nd I 0.000
chr1.CM0094.670.nd Lotus japonicus chr1.CM0094.670.nd I 0.000
chr1.CM0032.40.nd Lotus japonicus chr1.CM0032.40.nd I 0.000
Thhalv10015583m.g Eutrema salsugineum Thhalv10015583m.g I 0.000
Thhalv10014579m.g Eutrema salsugineum Thhalv10014579m.g I 0.000
Thhalv10005416m.g Eutrema salsugineum Thhalv10005416m.g I 0.000
Thhalv10004333m.g Eutrema salsugineum Thhalv10004333m.g I 0.000
SapurV1A.3099s0010 Salix purpurea SapurV1A.3099s0010 I 0.000
SapurV1A.0826s0010 Salix purpurea SapurV1A.0826s0010 I 0.000
SapurV1A.0787s0040 Salix purpurea SapurV1A.0787s0040 I 0.000
SapurV1A.0517s0130 Salix purpurea SapurV1A.0517s0130 I 0.000
MDP0000668122 Malus domestica MDP0000668122 I 0.000
MDP0000242979 Malus domestica MDP0000242979 I 0.000
MDP0000235028 Malus domestica MDP0000235028 I 0.000
gene27604-v1.0-hybrid Fragaria vesca gene27604-v1.0-hybrid I 0.000
gene21091-v1.0-hybrid Fragaria vesca gene21091-v1.0-hybrid I 0.000
gene06407-v1.0-hybrid Fragaria vesca gene06407-v1.0-hybrid I 0.000
gene06406-v1.0-hybrid Fragaria vesca gene06406-v1.0-hybrid I 0.000
evm.TU.supercontig_49.94 Carica papaya evm.TU.supercontig_49.94 I 0.000
evm.TU.supercontig_13.175 Carica papaya evm.TU.supercontig_13.175 I 0.000
Eucgr.K02780 Eucalyptus grandis Eucgr.K02780 I 0.000
Eucgr.K02193 Eucalyptus grandis Eucgr.K02193 I 0.000
Eucgr.I00292 Eucalyptus grandis Eucgr.I00292 I 0.000
Eucgr.G01970 Eucalyptus grandis Eucgr.G01970 I 0.000
Eucgr.F04203 Eucalyptus grandis Eucgr.F04203 I 0.000
Eucgr.F02691 Eucalyptus grandis Eucgr.F02691 I 0.000
Ciclev10032575m.g Citrus clementina Ciclev10032575m.g I 0.000
Ciclev10026032m.g Citrus clementina Ciclev10026032m.g I 0.000
Gorai.003G048800 Gossypium raimondii Gorai.003G048800 I 0.000
Gorai.005G078100 Gossypium raimondii Gorai.005G078100 I 0.000
MDP0000229036 Malus domestica MDP0000229036 I 0.000
MDP0000226099 Malus domestica MDP0000226099 I 0.000
MDP0000186131 Malus domestica MDP0000186131 I 0.000
Lus10028679.g Linum usitatissimum Lus10028679.g I 0.000
Lus10022426.g Linum usitatissimum Lus10022426.g I 0.000
Lus10006796.g Linum usitatissimum Lus10006796.g I 0.000
Lus10005805.g Linum usitatissimum Lus10005805.g I 0.000
Gorai.011G114900 Gossypium raimondii Gorai.011G114900 I 0.000
Gorai.010G131500 Gossypium raimondii Gorai.010G131500 I 0.000
Gorai.009G255400 Gossypium raimondii Gorai.009G255400 I 0.000
Gorai.008G210600 Gossypium raimondii Gorai.008G210600 I 0.000
Gorai.008G100500 Gossypium raimondii Gorai.008G100500 I 0.000
Gorai.008G075600 Gossypium raimondii Gorai.008G075600 I 0.000
Gorai.007G045100 Gossypium raimondii Gorai.007G045100 I 0.000
Ciclev10018158m.g Citrus clementina Ciclev10018158m.g I 0.000
TCM_017352 Theobroma cacao TCM_017352 I 0.000
MLOC_7891 Hordeum vulgare MLOC_7891 I 0.000
GRMZM2G149756 Zea mays GRMZM2G149756 I 0.000
GRMZM2G100727 Zea mays GRMZM2G100727 I 0.000
GRMZM2G076896 Zea mays GRMZM2G076896 I 0.000
GRMZM2G016434 Zea mays GRMZM2G016434 I 0.000
GLYMA20G30835 Glycine max GLYMA20G30835 I 0.000
GLYMA19G27790 Glycine max GLYMA19G27790 I 0.000
GLYMA16G27950 Glycine max GLYMA16G27950 I 0.000
GLYMA16G26320 Glycine max GLYMA16G26320 I 0.000
GLYMA16G05190 Glycine max GLYMA16G05190 I 0.000
GLYMA10G36760 Glycine max GLYMA10G36760 I 0.000
GLYMA06G17180 Glycine max GLYMA06G17180 I 0.000
GLYMA06G15341 Glycine max GLYMA06G15341 I 0.000
GLYMA05G32040 Glycine max GLYMA05G32040 I 0.000
GLYMA04G39510 Glycine max GLYMA04G39510 I 0.000
GRMZM2G369472 Zea mays GRMZM2G369472 I 0.000
GRMZM2G457562 Zea mays GRMZM2G457562 I 0.000
MLOC_68290 Hordeum vulgare MLOC_68290 I 0.000
LPERR12G03800 Leersia perrieri LPERR12G03800 I 0.000
LPERR11G03740 Leersia perrieri LPERR11G03740 I 0.000
LPERR05G14130 Leersia perrieri LPERR05G14130 I 0.000
LPERR04G20430 Leersia perrieri LPERR04G20430 I 0.000
LPERR02G14620 Leersia perrieri LPERR02G14620 I 0.000
LPERR01G33110 Leersia perrieri LPERR01G33110 I 0.000
GSMUA_Achr8G08000_001 Musa acuminata GSMUA_Achr8G08000_001 I 0.000
GSMUA_Achr6G25680_001 Musa acuminata GSMUA_Achr6G25680_001 I 0.000
GSMUA_Achr6G18020_001 Musa acuminata GSMUA_Achr6G18020_001 I 0.000
GSMUA_Achr6G02310_001 Musa acuminata GSMUA_Achr6G02310_001 I 0.000
GSMUA_Achr10G19950_001 Musa acuminata GSMUA_Achr10G19950_001 I 0.000
GSMUA_Achr10G09560_001 Musa acuminata GSMUA_Achr10G09560_001 I 0.000
GRMZM2G544539 Zea mays GRMZM2G544539 I 0.000
GLYMA02G08835 Glycine max GLYMA02G08835 I 0.000
GLYMA02G07310 Glycine max GLYMA02G07310 I 0.000
ERF110 Arabidopsis lyrata fgenesh2_kg.8__881__AT5G50080.1 I 0.000
Bo7g048170 Brassica oleracea Bo7g048170 I 0.000
Bo3g109240 Brassica oleracea Bo3g109240 I 0.000
Bo3g100930 Brassica oleracea Bo3g100930 I 0.000
Bo3g004290 Brassica oleracea Bo3g004290 I 0.000
Bo2g166380 Brassica oleracea Bo2g166380 I 0.000
Bo2g161710 Brassica oleracea Bo2g161710 I 0.000
Bo2g008570 Brassica oleracea Bo2g008570 I 0.000
BGIOSGA034432 Oryza indica BGIOSGA034432 I 0.000
BGIOSGA019928 Oryza indica BGIOSGA019928 I 0.000
BGIOSGA017088 Oryza indica BGIOSGA017088 I 0.000
BGIOSGA006362 Oryza indica BGIOSGA006362 I 0.000
BGIOSGA000428 Oryza indica BGIOSGA000428 I 0.000
ERF114 Arabidopsis thaliana AT5G61890 I 0.000
ERF110 Arabidopsis thaliana AT5G50080 I 0.000
Bo9g175390 Brassica oleracea Bo9g175390 I 0.000
Bra005932 Brassica rapa Bra005932 I 0.000
ABR1 Arabidopsis lyrata fgenesh2_kg.8__2506__AT5G64750.1 I 0.000
fgenesh2_kg.6__690__AT5G07310.1 Arabidopsis lyrata fgenesh2_kg.6__690__AT5G07310.1 I 0.000
ERF11 Arabidopsis lyrata fgenesh2_kg.1__3005__AT1G28370.1 I 0.000
BRADI3G38140 Brachypodium distachyon BRADI3G38140 I 0.000
BRADI2G56140 Brachypodium distachyon BRADI2G56140 I 0.000
BRADI2G24170 Brachypodium distachyon BRADI2G24170 I 0.000
Bra037794 Brassica rapa Bra037794 I 0.000
Bra031903 Brassica rapa Bra031903 I 0.000
Bra030095 Brassica rapa Bra030095 I 0.000
Bra029302 Brassica rapa Bra029302 I 0.000
Bra028703 Brassica rapa Bra028703 I 0.000
Bra024325 Brassica rapa Bra024325 I 0.000
Bra019622 Brassica rapa Bra019622 I 0.000
Bra009272 Brassica rapa Bra009272 I 0.000
AMTR_s00017p00232330 Amborella trichopoda AMTR_s00017p00232330 I 0.000
MTR_1g098460 Medicago truncatula MTR_1g098460 I 0.000
TCM_014762 Theobroma cacao TCM_014762 I 0.000
POPTR_0012s11030 Populus trichocarpa POPTR_0012s11030 I 0.000
POPTR_0007s07090 Populus trichocarpa POPTR_0007s07090 I 0.000
POPTR_0005s21690 Populus trichocarpa POPTR_0005s21690 I 0.000
POPTR_0005s08940 Populus trichocarpa POPTR_0005s08940 I 0.000
POPTR_0002s06620 Populus trichocarpa POPTR_0002s06620 I 0.000
PGSC0003DMG400023593 Solanum tuberosum PGSC0003DMG400023593 I 0.000
PGSC0003DMG400019693 Solanum tuberosum PGSC0003DMG400019693 I 0.000
PGSC0003DMG400018803 Solanum tuberosum PGSC0003DMG400018803 I 0.000
PGSC0003DMG400006369 Solanum tuberosum PGSC0003DMG400006369 I 0.000
OS11G0168500 Oryza sativa OS11G0168500 I 0.000
OS08G0474000 Oryza sativa OS08G0474000 I 0.000
OS05G0437100 Oryza sativa OS05G0437100 I 0.000
OS04G0610400 Oryza sativa OS04G0610400 I 0.000
OS01G0868000 Oryza sativa OS01G0868000 I 0.000
PRUPE_ppa006595mg Prunus persica PRUPE_ppa006595mg I 0.000
PRUPE_ppa008772mg Prunus persica PRUPE_ppa008772mg I 0.000
TCM_001301 Theobroma cacao TCM_001301 I 0.000
Solyc12g056590.1 Solanum lycopersicum Solyc12g056590.1 I 0.000
Solyc12g042210.1 Solanum lycopersicum Solyc12g042210.1 I 0.000
Solyc04g071770.2 Solanum lycopersicum Solyc04g071770.2 I 0.000
Solyc04g051360.2 Solanum lycopersicum Solyc04g051360.2 I 0.000
Solyc04g012050.2 Solanum lycopersicum Solyc04g012050.2 I 0.000
Si026709m.g Setaria italica Si026709m.g I 0.000
Si018024m.g Setaria italica Si018024m.g I 0.000
Si014237m.g Setaria italica Si014237m.g I 0.000
Si002010m.g Setaria italica Si002010m.g I 0.000
scaffold_802838.1 Arabidopsis lyrata scaffold_802838.1 I 0.000
Sb07g023030 Sorghum bicolor Sb07g023030 I 0.000
Sb05g004170 Sorghum bicolor Sb05g004170 I 0.000
Sb04g021160 Sorghum bicolor Sb04g021160 I 0.000
ORUFI11G04200 Oryza rufipogon ORUFI11G04200 I 0.000
ORUFI05G19030 Oryza rufipogon ORUFI05G19030 I 0.000
ORUFI04G26530 Oryza rufipogon ORUFI04G26530 I 0.000
ONIVA01G43260 Oryza nivara ONIVA01G43260 I 0.000
OMERI04G20480 Oryza meridionalis OMERI04G20480 I 0.000
OMERI01G35460 Oryza meridionalis OMERI01G35460 I 0.000
OLONG_013554 Oryza longistaminata OLONG_013554 I 0.000
OGLUM11G04050 Oryza glumaepatula OGLUM11G04050 I 0.000
OGLUM08G18720 Oryza glumaepatula OGLUM08G18720 I 0.000
OGLUM04G24780 Oryza glumaepatula OGLUM04G24780 I 0.000
OGLUM01G42800 Oryza glumaepatula OGLUM01G42800 I 0.000
OBART04G25320 Oryza barthii OBART04G25320 I 0.000
OBART02G18470 Oryza barthii OBART02G18470 I 0.000
MTR_8g092460 Medicago truncatula MTR_8g092460 I 0.000
MTR_6g037610 Medicago truncatula MTR_6g037610 I 0.000
MTR_6g033255 Medicago truncatula MTR_6g033255 I 0.000
MTR_3g098580 Medicago truncatula MTR_3g098580 I 0.000
ONIVA02G20490 Oryza nivara ONIVA02G20490 I 0.000
ONIVA04G24000 Oryza nivara ONIVA04G24000 I 0.000
ORUFI02G19470 Oryza rufipogon ORUFI02G19470 I 0.000
ORUFI01G41960 Oryza rufipogon ORUFI01G41960 I 0.000
ORGLA11G0040400 Oryza glaberrima ORGLA11G0040400 I 0.000
ORGLA05G0154400 Oryza glaberrima ORGLA05G0154400 I 0.000
ORGLA04G0219400 Oryza glaberrima ORGLA04G0219400 I 0.000
ORGLA01G0324200 Oryza glaberrima ORGLA01G0324200 I 0.000
OPUNC11G03940 Oryza punctata OPUNC11G03940 I 0.000
OPUNC08G15760 Oryza punctata OPUNC08G15760 I 0.000
OPUNC05G15760 Oryza punctata OPUNC05G15760 I 0.000
OPUNC04G22340 Oryza punctata OPUNC04G22340 I 0.000
OPUNC02G16450 Oryza punctata OPUNC02G16450 I 0.000
ONIVA11G04340 Oryza nivara ONIVA11G04340 I 0.000
ONIVA08G19930 Oryza nivara ONIVA08G19930 I 0.000
ONIVA05G18720 Oryza nivara ONIVA05G18720 I 0.000
MTR_3g095190 Medicago truncatula MTR_3g095190 I 0.000