OLONG_016325 (Oryza longistaminata)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02042 (RWP-RK) IPR003035 OLONG_016325 T320593_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RKD2
M07249_2.00
Arabidopsis thaliana
NHGWCBNTTCRDCTTCYHN

NDRGAAGHYGAANVGWCDN
Dap-seq
OMalley et al.(2016)
RKD2_col_a
0.735 0.735
RKD2
M07250_2.00
Arabidopsis thaliana
GWCBBTTCRDMTTCC

GGAAKHYGAAVVGWC
Dap-seq
OMalley et al.(2016)
RKD2_colamp_a
0.735 0.735
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OLONG_016325-R1 RWP-RK 115 163

Links

Other RWP-RK family TFs
Other Oryza longistaminata TFs

48 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
M437DRAFT_40439 Aureobasidium melanogenum M437DRAFT_40439 N 0.000
M438DRAFT_334214 Aureobasidium pullulans M438DRAFT_334214 N 0.000
M438DRAFT_272404 Aureobasidium pullulans M438DRAFT_272404 I 0.000
PV04_08060 Capronia semiimmersa PV04_08060 I 0.000
Z519_01249 Cladophialophora bantiana Z519_01249 I 0.000
G647_02495 Cladophialophora carrionii G647_02495 I 0.000
PV07_11766 Cladophialophora immunda PV07_11766 I 0.000
A1O5_09317 Cladophialophora psammophila A1O5_09317 I 0.000
A1O7_07588 Cladophialophora yegresii A1O7_07588 I 0.000
A1O9_12115 Exophiala aquamarina A1O9_12115 I 0.000
HMPREF1120_07579 Exophiala dermatitidis HMPREF1120_07579 I 0.000
PV11_00701 Exophiala sideris PV11_00701 N 0.000
PV05_05046 Exophiala xenobiotica PV05_05046 I 0.000
Z517_03173 Fonsecaea pedrosoi Z517_03173 I 0.000
PV09_04872 Verruconis gallopava PV09_04872 N 0.000