Solyc03g116010.1 (Solanum lycopersicum)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02042 (RWP-RK) IPR003035 Solyc03g116010.1 T320835_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RKD2
M07249_2.00
Arabidopsis thaliana
NHGWCBNTTCRDCTTCYHN

NDRGAAGHYGAANVGWCDN
Dap-seq
OMalley et al.(2016)
RKD2_col_a
0.755 0.755
RKD2
M07250_2.00
Arabidopsis thaliana
GWCBBTTCRDMTTCC

GGAAKHYGAAVVGWC
Dap-seq
OMalley et al.(2016)
RKD2_colamp_a
0.755 0.755
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc03g116010.1.1 RWP-RK 144 192

Links

Other RWP-RK family TFs
Other Solanum lycopersicum TFs

61 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ZBTB45 Sorex araneus ENSSARG00000001558 I 0.000
ZBTB45 Otolemur garnettii ENSOGAG00000034747 I 0.000
ENSOPRG00000017040 Ochotona princeps ENSOPRG00000017040 I 0.000
zbtb45.L Xenopus laevis XB-GENE-17330664 N 0.000
Pvit_03126 Pogona vitticeps Pvit_03126 N 0.000
Ogr03674 Ophisaurus gracilis Ogr03674 N 0.000
Cmyd_10003616 Chelonia mydas Cmyd_10003616 N 0.000
Alligator_sinensis_CCG013964.1 Alligator sinensis Alligator_sinensis_CCG013964.1 N 0.000
ENSACAG00000010650 Anolis carolinensis ENSACAG00000010650 N 0.000
ENSPSIG00000013341 Pelodiscus sinensis ENSPSIG00000013341 N 0.000
ENSLACG00000008725 Latimeria chalumnae ENSLACG00000008725 N 0.000
ENSAMXG00000013012 Astyanax mexicanus ENSAMXG00000013012 N 0.000
zbtb45.S Xenopus laevis XB-GENE-5817023 N 0.000