Solyc03g116010.1 (Solanum lycopersicum)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02042 (RWP-RK) IPR003035 Solyc03g116010.1 T320835_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RKD2
M07249_2.00
Arabidopsis thaliana
NHGWCBNTTCRDCTTCYHN

NDRGAAGHYGAANVGWCDN
Dap-seq
OMalley et al.(2016)
RKD2_col_a
0.755 0.755
RKD2
M07250_2.00
Arabidopsis thaliana
GWCBBTTCRDMTTCC

GGAAKHYGAAVVGWC
Dap-seq
OMalley et al.(2016)
RKD2_colamp_a
0.755 0.755
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc03g116010.1.1 RWP-RK 144 192

Links

Other RWP-RK family TFs
Other Solanum lycopersicum TFs

61 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BBA_09380 Beauveria bassiana BBA_09380 N 0.000
CCM_08564 Cordyceps militaris CCM_08564 N 0.000
CFIO01_02535 Colletotrichum fioriniae CFIO01_02535 N 0.000
CGGC5_7905 Colletotrichum gloeosporioides CGGC5_7905 N 0.000
CH063_12002 Colletotrichum higginsianum CH063_12002 N 0.000
Cob_06895 Colletotrichum orbiculare Cob_06895 N 0.000
CPUR_04268 Claviceps purpurea CPUR_04268 N 0.000
CSUB01_08191 Colletotrichum sublineola CSUB01_08191 N 0.000
FFUJ_09949 Fusarium fujikuroi FFUJ_09949 N 0.000
fgenesh1_pm.sca_11_chr8_3_0000161 Nectria haematococca fgenesh1_pm.sca_11_chr8_3_0000161 N 0.000
FGRRES_04459 Fusarium graminearum FGRRES_04459 N 0.000
FOXG_13751 Fusarium oxysporum FOXG_13751 N 0.000
FPSE_09905 Fusarium pseudograminearum FPSE_09905 N 0.000
FVEG_11185 Fusarium verticillioides FVEG_11185 N 0.000
GGTG_02165 Gaeumannomyces graminis GGTG_02165 N 0.000
GLRG_08213 Colletotrichum graminicola GLRG_08213 N 0.000
MAJ_04177 Metarhizium majus MAJ_04177 N 0.000
MAM_07880 Metarhizium album MAM_07880 N 0.000
MANI_115749 Metarhizium anisopliae MANI_115749 N 0.000
MBR_01746 Metarhizium brunneum MBR_01746 N 0.000
MGU_02426 Metarhizium guizhouense MGU_02426 N 0.000
NechaG95819 Fusarium solani NechaG95819 N 0.000
OCS_01728 Ophiocordyceps sinensis OCS_01728 N 0.000
S40285_04994 Stachybotrys chlorohalonata S40285_04994 N 0.000
S40288_00719 Stachybotrys chartarum S40288_00719 N 0.000
UV8b_1420 Ustilaginoidea virens UV8b_1420 N 0.000
VDAG_03761 Verticillium dahliae VDAG_03761 N 0.000
VDBG_02844 Verticillium alfalfae VDBG_02844 N 0.000
VDBG_02844 Verticillium albo atrum VDBG_02844 N 0.000