Ca_13151 (Cicer arietinum)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02042 (RWP-RK) IPR003035 Ca_13151 T320911_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RKD2
M07249_2.00
Arabidopsis thaliana
NHGWCBNTTCRDCTTCYHN

NDRGAAGHYGAANVGWCDN
Dap-seq
OMalley et al.(2016)
RKD2_col_a
0.796 0.796
RKD2
M07250_2.00
Arabidopsis thaliana
GWCBBTTCRDMTTCC

GGAAKHYGAAVVGWC
Dap-seq
OMalley et al.(2016)
RKD2_colamp_a
0.796 0.796
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ca_13151 RWP-RK 139 187

Links

Other RWP-RK family TFs
Other Cicer arietinum TFs

78 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AT2G01818 Arabidopsis thaliana AT2G01818 D 0.000
Cagra.2235s0037 Capsella grandiflora Cagra.2235s0037 I 0.000
Carubv10017978m.g Capsella rubella Carubv10017978m.g I 0.000
Eucgr.G02080 Eucalyptus grandis Eucgr.G02080 I 0.000
evm.TU.supercontig_2.160 Carica papaya evm.TU.supercontig_2.160 I 0.000
Gorai.005G152700 Gossypium raimondii Gorai.005G152700 I 0.000
Gorai.008G170500 Gossypium raimondii Gorai.008G170500 I 0.000
Gorai.013G029900 Gossypium raimondii Gorai.013G029900 I 0.000
Lus10030763.g Linum usitatissimum Lus10030763.g I 0.000
MDP0000290118 Malus domestica MDP0000290118 I 0.000
SapurV1A.0015s0650 Salix purpurea SapurV1A.0015s0650 I 0.000
SapurV1A.0055s0220 Salix purpurea SapurV1A.0055s0220 I 0.000
Thhalv10005480m.g Eutrema salsugineum Thhalv10005480m.g I 0.000
Bostr.0556s0005 Boechera stricta Bostr.0556s0005 I 0.000
PK02661.1 Cannabis sativa PK02661.1 I 0.000
Bo2g134600 Brassica oleracea Bo2g134600 I 0.000
Bo7g078820 Brassica oleracea Bo7g078820 I 0.000
fgenesh2_kg.5__89__AT2G01818.1 Arabidopsis lyrata fgenesh2_kg.5__89__AT2G01818.1 I 0.000
POPTR_0008s13660 Populus trichocarpa POPTR_0008s13660 I 0.000
POPTR_0010s11410 Populus trichocarpa POPTR_0010s11410 I 0.000
PRUPE_ppa011075mg Prunus persica PRUPE_ppa011075mg I 0.000
TCM_011266 Theobroma cacao TCM_011266 I 0.000
29968.m000644 Ricinus communis 29968.m000644 I 0.000
Pm005894 Prunus mume Pm005894 I 0.000
cassava20325.m1 Manihot esculenta cassava20325.m1 I 0.000
Cucsa.012070 Cucumis sativus Cucsa.012070 N 0.000
mgf026615m Mimulus guttatus mgf026615m N 0.000
orange1.1g027579m.g Citrus sinensis orange1.1g027579m.g N 0.000
PGSC0003DMG400029466 Solanum tuberosum PGSC0003DMG400029466 N 0.000
VIT_01s0011g06060 Vitis vinifera VIT_01s0011g06060 N 0.000
Lus10028998.g Linum usitatissimum Lus10028998.g N 0.000
Lus10003680.g Linum usitatissimum Lus10003680.g N 0.000
Ciclev10016611m.g Citrus clementina Ciclev10016611m.g N 0.000
Cla005897 Citrullus lanatus Cla005897 N 0.000
cassava40347.m1 Manihot esculenta cassava40347.m1 N 0.000