Pm024166 (Prunus mume)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02042 (RWP-RK) IPR003035 Pm024166 T320927_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NLP7
M07251_2.00
Arabidopsis thaliana
WNDTGNCYYTTSRDD

HHYSAARRGNCAHNW
Dap-seq
OMalley et al.(2016)
NLP7_col_a
0.918 0.918
NLP4
M07248_2.00
Arabidopsis thaliana
NNHNNBTGCTGYHNN

NNDRCAGCAVNNDNN
Dap-seq
OMalley et al.(2016)
AtNLP4_col_b
0.816 0.816
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm024166 RWP-RK 594 642

Links

Other RWP-RK family TFs
Other Prunus mume TFs

413 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aquca_027_00443 Aquilegia coerulea Aquca_027_00443 I 0.000
AT1G19490 Arabidopsis thaliana AT1G19490 D 0.000
Bostr.7128s0552 Boechera stricta Bostr.7128s0552 I 0.000
Bo5g027510 Brassica oleracea Bo5g027510 I 0.000
Bra025743 Brassica rapa Bra025743 I 0.000
PK09783.1 Cannabis sativa PK09783.1 I 0.000
Cagra.1961s0053 Capsella grandiflora Cagra.1961s0053 I 0.000
Carubv10011417m.g Capsella rubella Carubv10011417m.g I 0.000
evm.TU.supercontig_5.51 Carica papaya evm.TU.supercontig_5.51 I 0.000
Cla017983 Citrullus lanatus Cla017983 I 0.000
Ciclev10013541m.g Citrus clementina Ciclev10013541m.g I 0.000
Cucsa.240980 Cucumis sativus Cucsa.240980 I 0.000
Thhalv10009681m.g Eutrema salsugineum Thhalv10009681m.g I 0.000
gene30252-v1.0-hybrid Fragaria vesca gene30252-v1.0-hybrid I 0.000
GLYMA03G35101 Glycine max GLYMA03G35101 I 0.000
GLYMA19G37801 Glycine max GLYMA19G37801 I 0.000
Gorai.009G405400 Gossypium raimondii Gorai.009G405400 I 0.000
Lus10003255.g Linum usitatissimum Lus10003255.g I 0.000
Lus10035597.g Linum usitatissimum Lus10035597.g I 0.000
MDP0000147745 Malus domestica MDP0000147745 I 0.000
cassava31755.valid.m1 Manihot esculenta cassava31755.valid.m1 I 0.000
MTR_7g104190 Medicago truncatula MTR_7g104190 I 0.000
POPTR_0006s11550 Populus trichocarpa POPTR_0006s11550 I 0.000
PRUPE_ppa003901mg Prunus persica PRUPE_ppa003901mg I 0.000
28779.m000140 Ricinus communis 28779.m000140 I 0.000
SapurV1A.0208s0130 Salix purpurea SapurV1A.0208s0130 I 0.000
TCM_022516 Theobroma cacao TCM_022516 I 0.000
VIT_08s0007g03640 Vitis vinifera VIT_08s0007g03640 I 0.000