Pm024905 (Prunus mume)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02042 (RWP-RK) IPR003035 Pm024905 T320928_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RKD2
M07249_2.00
Arabidopsis thaliana
NHGWCBNTTCRDCTTCYHN

NDRGAAGHYGAANVGWCDN
Dap-seq
OMalley et al.(2016)
RKD2_col_a
0.837 0.837
RKD2
M07250_2.00
Arabidopsis thaliana
GWCBBTTCRDMTTCC

GGAAKHYGAAVVGWC
Dap-seq
OMalley et al.(2016)
RKD2_colamp_a
0.837 0.837
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm024905 RWP-RK 169 217

Links

Other RWP-RK family TFs
Other Prunus mume TFs

86 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
csin109769 Clonorchis sinensis csin109769 N 0.000
ECANG7_08792 Echinococcus canadensis ECANG7_08792 N 0.000
ECPE_0001125701 Echinostoma caproni ECPE_0001125701 N 0.000
EmuJ_000664200 Echinococcus multilocularis EmuJ_000664200 N 0.000
HDID_0000408501 Hymenolepis diminuta HDID_0000408501 N 0.000
HmN_000696200 Hymenolepis microstoma HmN_000696200 N 0.000
HNAJ_0001250701 Hymenolepis nana HNAJ_0001250701 N 0.000
MCOS_0000035501 Mesocestoides corti MCOS_0000035501 N 0.000
SCUD_0002083401 Schistosoma curassoni SCUD_0002083401 N 0.000
SMRZ_0002373501 Schistosoma margrebowiei SMRZ_0002373501 N 0.000
SPER_0002737601 Spirometra erinaceieuropaei SPER_0002737601 N 0.000
T265_08377 Opisthorchis viverrini T265_08377 N 0.000
TASK_0000847801 Taenia asiatica TASK_0000847801 N 0.000
TRE_0000501301 Trichobilharzia regenti TRE_0000501301 N 0.000
TsM_001129200 Taenia solium TsM_001129200 N 0.000
TTAC_0000138601 Hydatigera taeniaeformis TTAC_0000138601 N 0.000